<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="2746" inparalogs="8564"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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        <gene id="8545" protId="D2VER7" geneId="NAEGRDRAFT_67368"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="N.gruberi" link="http://www.uniprot.org/taxonomy/5762"/>
    </notes>
  </species>
  <species name="Oreochromis niloticus " NCBITaxId="8128">
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        <gene id="225" protId="I3J8F4" geneId="LOC100708580"/>
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        <gene id="8291" protId="I3K0H8" geneId="LOC100699084"/>
        <gene id="8293" protId="I3JBQ7" geneId="LOC100707186"/>
        <gene id="8294" protId="I3KLR0" geneId="LOC100703286"/>
        <gene id="8295" protId="I3KGL3" geneId="DNAJB12 (2 of 2)"/>
        <gene id="8297" protId="I3KD79" geneId="LOC100707339"/>
        <gene id="8298" protId="I3JVX7" geneId="LOC100698972"/>
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        <gene id="8302" protId="I3JD63" geneId="LOC100690999"/>
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        <gene id="8328" protId="I3JN35" geneId="uncharacterized_I3JN35"/>
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        <gene id="8331" protId="I3IUY8" geneId="LOC100704396"/>
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        <gene id="8355" protId="I3JVF9" geneId="uncharacterized_I3JVF9"/>
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        <gene id="8357" protId="I3JIS1" geneId="uncharacterized_I3JIS1"/>
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        <gene id="8362" protId="I3JSG6" geneId="uncharacterized_I3JSG6"/>
        <gene id="8363" protId="I3KSQ4" geneId="uncharacterized_I3KSQ4"/>
        <gene id="8364" protId="I3JK68" geneId="LOC100700259"/>
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        <gene id="8368" protId="I3K962" geneId="uncharacterized_I3K962"/>
        <gene id="8369" protId="I3JGJ3" geneId="uncharacterized_I3JGJ3"/>
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        <gene id="8371" protId="I3JSE4" geneId="uncharacterized_I3JSE4"/>
        <gene id="8372" protId="I3IY52" geneId="uncharacterized_I3IY52"/>
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        <gene id="8374" protId="I3K4E8" geneId="uncharacterized_I3K4E8"/>
        <gene id="8375" protId="I3KVV0" geneId="LOC100702593"/>
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        <gene id="8378" protId="I3IVQ3" geneId="uncharacterized_I3IVQ3"/>
        <gene id="8379" protId="I3KM91" geneId="ABLIM3 (1 of 2)"/>
        <gene id="8380" protId="I3JDB4" geneId="uncharacterized_I3JDB4"/>
        <gene id="8381" protId="I3JPM5" geneId="ablim3"/>
        <gene id="8384" protId="I3KJP3" geneId="LOC100711235"/>
        <gene id="8386" protId="I3J0S9" geneId="uncharacterized_I3J0S9"/>
        <gene id="8388" protId="I3JBX9" geneId="LOC100709895"/>
        <gene id="8390" protId="I3J4I6" geneId="MRPL46"/>
        <gene id="8392" protId="I3KMX3" geneId="LOC100695696"/>
        <gene id="8397" protId="I3K9V1" geneId="LOC100706048"/>
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        <gene id="8399" protId="I3KT94" geneId="LOC100699379"/>
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        <gene id="8404" protId="I3J7A0" geneId="LOC100705971"/>
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        <gene id="8411" protId="I3JSP6" geneId="LOC100692915"/>
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        <gene id="8416" protId="Q3LHN4" geneId="ansn"/>
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        <gene id="8421" protId="I3JJ64" geneId="LOC100709110"/>
        <gene id="8423" protId="I3K590" geneId="LOC100705972"/>
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        <gene id="8429" protId="I3JZA1" geneId="LOC100692995"/>
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        <gene id="8437" protId="I3IW10" geneId="LOC100709657"/>
        <gene id="8438" protId="I3K231" geneId="RGS6 (2 of 2)"/>
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        <gene id="8440" protId="I3KQU6" geneId="LOC100701759"/>
        <gene id="8443" protId="I3J3P3" geneId="LOC100706544"/>
        <gene id="8444" protId="I3KIX8" geneId="LOC100704974"/>
        <gene id="8445" protId="I3IU56" geneId="LOC100711791"/>
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        <gene id="8449" protId="I3JTG2" geneId="LOC100707000"/>
        <gene id="8452" protId="I3JDR5" geneId="LOC100708163"/>
        <gene id="8454" protId="I3J709" geneId="uncharacterized_I3J709"/>
        <gene id="8456" protId="I3K9M0" geneId="LOC100695557"/>
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        <gene id="8460" protId="I3KQY2" geneId="LOC100703533"/>
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        <gene id="8466" protId="I3KZ76" geneId="LOC100690134"/>
        <gene id="8467" protId="I3KMY3" geneId="LOC100690069"/>
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        <gene id="8473" protId="I3JV69" geneId="LOC100702960"/>
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        <gene id="8475" protId="I3KMY2" geneId="LOC100689800"/>
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        <gene id="8491" protId="I3IVK3" geneId="LOC100693830"/>
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        <gene id="8494" protId="I3KXQ1" geneId="LOC100700701"/>
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        <gene id="8525" protId="I3K279" geneId="MID1 (2 of 2)"/>
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        <gene id="8531" protId="I3IUJ3" geneId="LOC100703027"/>
        <gene id="8533" protId="I3KAH8" geneId="LOC100701477"/>
        <gene id="8534" protId="I3JVF2" geneId="LOC100698558"/>
        <gene id="8535" protId="I3J1Q0" geneId="PPAP2C (1 of 2)"/>
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        <gene id="8537" protId="I3KDK2" geneId="PPAP2A (1 of 2)"/>
        <gene id="8539" protId="I3JQW6" geneId="LOC100708084"/>
        <gene id="8540" protId="I3J4R9" geneId="LOC100690403"/>
        <gene id="8542" protId="I3J025" geneId="LOC100708887"/>
        <gene id="8544" protId="I3JQI7" geneId="LOC100692822"/>
        <gene id="8546" protId="I3JF70" geneId="LOC100703185"/>
        <gene id="8548" protId="I3KNK8" geneId="SERHL2 (1 of 2)"/>
        <gene id="8550" protId="I3K164" geneId="LOC100710075"/>
        <gene id="8552" protId="I3KE49" geneId="LOC100706263"/>
        <gene id="8554" protId="I3K4R0" geneId="LOC100697793"/>
        <gene id="8556" protId="I3JRA2" geneId="LOC100704812"/>
        <gene id="8557" protId="I3KSF5" geneId="a1cf"/>
        <gene id="8558" protId="I3KUI9" geneId="hnrnpr"/>
        <gene id="8559" protId="I3J6S2" geneId="LOC100696647"/>
        <gene id="8562" protId="I3K0S8" geneId="LOC100694284"/>
        <gene id="8564" protId="I3JXP0" geneId="LOC100703135"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="O.niloticus" link="http://www.uniprot.org/taxonomy/8128"/>
    </notes>
  </species>
  <scores>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.292"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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