###################################
224 groups of orthologs
264 in-paralogs from B.thetaiotaomicron
253 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1150 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:1150 P.jiroveci:1150

Q8AAA8              	100.00%		L0P7C3              	100.00%
Q8A105              	30.90%		
Bootstrap support for Q8AAA8 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #2. Best score 906 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:906 P.jiroveci:906

Q8A8M0              	100.00%		L0P7P6              	100.00%
Bootstrap support for Q8A8M0 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #3. Best score 811 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:697 P.jiroveci:811

Q8A614              	100.00%		L0PFN4              	100.00%
Bootstrap support for Q8A614 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #4. Best score 657 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:117 P.jiroveci:657

Q89YY3              	100.00%		L0P9C7              	100.00%
Bootstrap support for Q89YY3 as seed ortholog is 99%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #5. Best score 649 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:585 P.jiroveci:104

Q89YW6              	100.00%		L0PFS2              	100.00%
Bootstrap support for Q89YW6 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 99%.

Group of orthologs #6. Best score 570 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:570 P.jiroveci:570

Q8A6Z2              	100.00%		L0PF80              	100.00%
Bootstrap support for Q8A6Z2 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #7. Best score 559 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:559 P.jiroveci:559

Q8A9U7              	100.00%		L0P833              	100.00%
                    	       		L0P765              	10.91%
Bootstrap support for Q8A9U7 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #8. Best score 552 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:552 P.jiroveci:478

Q8A6P8              	100.00%		L0PDM6              	100.00%
Bootstrap support for Q8A6P8 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #9. Best score 529 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:529 P.jiroveci:529

Q8A407              	100.00%		L0PDJ1              	100.00%
Bootstrap support for Q8A407 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #10. Best score 526 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:240 P.jiroveci:259

Q8A474              	100.00%		L0PBP8              	100.00%
Bootstrap support for Q8A474 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 99%.

Group of orthologs #11. Best score 515 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:515 P.jiroveci:515

Q8A0M6              	100.00%		L0PDQ4              	100.00%
Bootstrap support for Q8A0M6 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #12. Best score 507 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:507 P.jiroveci:507

Q8A463              	100.00%		L0P9G2              	100.00%
Bootstrap support for Q8A463 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #13. Best score 497 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:497 P.jiroveci:497

Q8A8E5              	100.00%		L0PHB7              	100.00%
Bootstrap support for Q8A8E5 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #14. Best score 493 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:493 P.jiroveci:345

Q89ZM4              	100.00%		L0PDB3              	100.00%
Bootstrap support for Q89ZM4 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #15. Best score 476 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:476 P.jiroveci:476

Q8AAB1              	100.00%		L0PAS8              	100.00%
Bootstrap support for Q8AAB1 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #16. Best score 462 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:125 P.jiroveci:462

Q89ZV6              	100.00%		L0PAQ1              	100.00%
Bootstrap support for Q89ZV6 as seed ortholog is 99%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #17. Best score 447 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:447 P.jiroveci:447

Q8A2N7              	100.00%		L0PCP1              	100.00%
Bootstrap support for Q8A2N7 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #18. Best score 439 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:319 P.jiroveci:439

Q8AA33              	100.00%		L0PBG8              	100.00%
Bootstrap support for Q8AA33 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #19. Best score 433 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:235 P.jiroveci:97

Q8A4Q6              	100.00%		L0PFW1              	100.00%
Bootstrap support for Q8A4Q6 as seed ortholog is 99%.
Bootstrap support for L0PFW1 as seed ortholog is 92%.

Group of orthologs #20. Best score 401 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:401 P.jiroveci:401

Q8A9V4              	100.00%		L0PDC9              	100.00%
Bootstrap support for Q8A9V4 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #21. Best score 398 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:398 P.jiroveci:136

Q8AAP2              	100.00%		L0P9U5              	100.00%
Bootstrap support for Q8AAP2 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 99%.

Group of orthologs #22. Best score 397 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:231 P.jiroveci:397

Q8AAE7              	100.00%		L0PBN0              	100.00%
Bootstrap support for Q8AAE7 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #23. Best score 383 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:383 P.jiroveci:383

Q8A414              	100.00%		L0PFF6              	100.00%
Bootstrap support for Q8A414 as seed ortholog is 100%.
Bootstrap support for L0PFF6 as seed ortholog is 100%.

Group of orthologs #24. Best score 376 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:192 P.jiroveci:238

Q8A8S6              	100.00%		L0PGH3              	100.00%
Bootstrap support for Q8A8S6 as seed ortholog is 99%.
Bootstrap support for L0PGH3 as seed ortholog is 99%.

Group of orthologs #25. Best score 373 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:373 P.jiroveci:373

Q8AA75              	100.00%		L0PC65              	100.00%
Bootstrap support for Q8AA75 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #26. Best score 364 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:364 P.jiroveci:364

Q8A2T6              	100.00%		L0PBR9              	100.00%
Bootstrap support for Q8A2T6 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #27. Best score 363 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:363 P.jiroveci:363

Q8A2A1              	100.00%		L0PG75              	100.00%
Bootstrap support for Q8A2A1 as seed ortholog is 100%.
Bootstrap support for L0PG75 as seed ortholog is 100%.

Group of orthologs #28. Best score 361 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:361 P.jiroveci:361

Q8A2E7              	100.00%		L0PEX5              	100.00%
Bootstrap support for Q8A2E7 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #29. Best score 356 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:356 P.jiroveci:144

Q8A5W4              	100.00%		L0PFG7              	100.00%
Bootstrap support for Q8A5W4 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 99%.

Group of orthologs #30. Best score 355 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:355 P.jiroveci:355

Q8AAA9              	100.00%		L0PG02              	100.00%
Bootstrap support for Q8AAA9 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #31. Best score 350 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:350 P.jiroveci:251

Q8A9E3              	100.00%		L0P8W4              	100.00%
Bootstrap support for Q8A9E3 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #32. Best score 344 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:344 P.jiroveci:344

Q8AAW5              	100.00%		L0PF66              	100.00%
Bootstrap support for Q8AAW5 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #33. Best score 341 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:341 P.jiroveci:120

Q8A334              	100.00%		L0PIP5              	100.00%
Bootstrap support for Q8A334 as seed ortholog is 100%.
Bootstrap support for L0PIP5 as seed ortholog is 97%.

Group of orthologs #34. Best score 331 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:331 P.jiroveci:331

Q8A2Q2              	100.00%		L0PE57              	100.00%
Bootstrap support for Q8A2Q2 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #35. Best score 329 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:329 P.jiroveci:329

Q8A126              	100.00%		L0P7N3              	100.00%
Bootstrap support for Q8A126 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #36. Best score 329 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:329 P.jiroveci:264

Q8A8G2              	100.00%		L0PDI1              	100.00%
Bootstrap support for Q8A8G2 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #37. Best score 329 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:329 P.jiroveci:329

Q8A849              	100.00%		L0PED9              	100.00%
Bootstrap support for Q8A849 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #38. Best score 312 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:312 P.jiroveci:312

Q8A6N4              	100.00%		L0PFY1              	100.00%
Bootstrap support for Q8A6N4 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #39. Best score 309 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:309 P.jiroveci:309

Q8A9S7              	100.00%		L0PCX1              	100.00%
Bootstrap support for Q8A9S7 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #40. Best score 306 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:306 P.jiroveci:306

Q8A460              	100.00%		L0PF23              	100.00%
Bootstrap support for Q8A460 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #41. Best score 303 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:303 P.jiroveci:303

Q8A875              	100.00%		L0PH89              	100.00%
Bootstrap support for Q8A875 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #42. Best score 300 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:300 P.jiroveci:108

Q8A9K9              	100.00%		L0PBQ6              	100.00%
Bootstrap support for Q8A9K9 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 92%.

Group of orthologs #43. Best score 298 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:298 P.jiroveci:298

Q8A470              	100.00%		L0PB43              	100.00%
                    	       		L0PB90              	100.00%
Bootstrap support for Q8A470 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #44. Best score 297 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:297 P.jiroveci:297

Q8A602              	100.00%		L0PHL5              	100.00%
Bootstrap support for Q8A602 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #45. Best score 294 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:294 P.jiroveci:79

Q8A2F2              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	42.97%
                    	       		L0PB83              	7.75%
                    	       		L0PG21              	6.03%
Bootstrap support for Q8A2F2 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 56%.
Alternative seed ortholog is L0PE26 (79 bits away from this cluster)

Group of orthologs #46. Best score 290 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:290 P.jiroveci:290

Q8A9H8              	100.00%		L0PEK9              	100.00%
Bootstrap support for Q8A9H8 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #47. Best score 288 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:288 P.jiroveci:288

Q8A8K6              	100.00%		L0P9K9              	100.00%
Bootstrap support for Q8A8K6 as seed ortholog is 100%.
Bootstrap support for L0P9K9 as seed ortholog is 100%.

Group of orthologs #48. Best score 286 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:286 P.jiroveci:286

Q8ABI5              	100.00%		L0P971              	100.00%
Bootstrap support for Q8ABI5 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #49. Best score 282 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:95 P.jiroveci:282

Q8A2K6              	100.00%		L0PG19              	100.00%
Bootstrap support for Q8A2K6 as seed ortholog is 96%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #50. Best score 280 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:280 P.jiroveci:219

Q8A329              	100.00%		L0PBN1              	100.00%
Bootstrap support for Q8A329 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 99%.

Group of orthologs #51. Best score 280 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:280 P.jiroveci:280

Q8A9M8              	100.00%		L0PGA8              	100.00%
Bootstrap support for Q8A9M8 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #52. Best score 279 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:108 P.jiroveci:279

Q8A028              	100.00%		L0P7X9              	100.00%
                    	       		L0PBE2              	100.00%
Bootstrap support for Q8A028 as seed ortholog is 96%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.
Bootstrap support for L0PBE2 as seed ortholog is 100%.

Group of orthologs #53. Best score 278 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:221 P.jiroveci:211

Q8A127              	100.00%		L0PFY2              	100.00%
Q8A6M9              	14.05%		
Bootstrap support for Q8A127 as seed ortholog is 100%.
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #54. Best score 277 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:277 P.jiroveci:277

Q8A6W7              	100.00%		L0PGV5              	100.00%
Q8A6W1              	35.86%		
Bootstrap support for Q8A6W7 as seed ortholog is 100%.
Bootstrap support for L0PGV5 as seed ortholog is 100%.

Group of orthologs #55. Best score 272 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:272 P.jiroveci:272

Q8A8E6              	100.00%		L0PG48              	100.00%
Bootstrap support for Q8A8E6 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #56. Best score 269 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:269 P.jiroveci:93

Q8A0Z8              	100.00%		L0PC30              	100.00%
Bootstrap support for Q8A0Z8 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 98%.

Group of orthologs #57. Best score 268 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.jiroveci:268

Q8A2W9              	100.00%		L0P7Y5              	100.00%
Q8AB03              	40.73%		
Bootstrap support for Q8A2W9 as seed ortholog is 98%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #58. Best score 265 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:265 P.jiroveci:265

Q8A0F6              	100.00%		L0PB96              	100.00%
Bootstrap support for Q8A0F6 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #59. Best score 260 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:260 P.jiroveci:260

Q8A3W3              	100.00%		L0PEE3              	100.00%
Bootstrap support for Q8A3W3 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #60. Best score 257 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:257 P.jiroveci:257

Q8A455              	100.00%		L0PDV1              	100.00%
Bootstrap support for Q8A455 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #61. Best score 257 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:124 P.jiroveci:3

Q8A6J6              	100.00%		L0PDY0              	100.00%
Bootstrap support for Q8A6J6 as seed ortholog is 99%.
Bootstrap support for L0PDY0 as seed ortholog is 53%.
Alternative seed ortholog is L0PEM1 (3 bits away from this cluster)

Group of orthologs #62. Best score 252 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:252 P.jiroveci:252

Q8A9I0              	100.00%		L0P7Z6              	100.00%
Bootstrap support for Q8A9I0 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #63. Best score 251 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:251 P.jiroveci:251

Q8A378              	100.00%		L0PC37              	100.00%
Bootstrap support for Q8A378 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #64. Best score 248 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:56 P.jiroveci:120

Q8A2B9              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	100.00%
Bootstrap support for Q8A2B9 as seed ortholog is 89%.
Bootstrap support for L0P9A8 as seed ortholog is 99%.
Bootstrap support for L0PHB9 as seed ortholog is 99%.

Group of orthologs #65. Best score 248 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:248 P.jiroveci:248

Q8A448              	100.00%		L0PES7              	100.00%
Bootstrap support for Q8A448 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #66. Best score 245 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:245 P.jiroveci:132

Q8A9R7              	100.00%		L0P6V9              	100.00%
                    	       		L0PBF0              	8.36%
Bootstrap support for Q8A9R7 as seed ortholog is 100%.
Bootstrap support for L0P6V9 as seed ortholog is 99%.

Group of orthologs #67. Best score 239 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:239 P.jiroveci:239

Q8A880              	100.00%		L0PDF3              	100.00%
Bootstrap support for Q8A880 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #68. Best score 224 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:224 P.jiroveci:224

Q8A7B8              	100.00%		L0P7B5              	100.00%
Bootstrap support for Q8A7B8 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #69. Best score 219 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:219 P.jiroveci:219

Q8A555              	100.00%		L0PA23              	100.00%
Q8A6G1              	25.59%		
Bootstrap support for Q8A555 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #70. Best score 218 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:218 P.jiroveci:218

Q8A9B8              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	87.76%
Bootstrap support for Q8A9B8 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #71. Best score 217 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:217 P.jiroveci:79

Q8A3M1              	100.00%		L0PET5              	100.00%
Bootstrap support for Q8A3M1 as seed ortholog is 100%.
Bootstrap support for L0PET5 as seed ortholog is 94%.

Group of orthologs #72. Best score 216 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:216 P.jiroveci:216

Q8A6N7              	100.00%		L0PCY5              	100.00%
Bootstrap support for Q8A6N7 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #73. Best score 215 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:95 P.jiroveci:215

Q8A7C3              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	31.85%
Bootstrap support for Q8A7C3 as seed ortholog is 99%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #74. Best score 213 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:213 P.jiroveci:213

Q89YZ6              	100.00%		L0PF83              	100.00%
Bootstrap support for Q89YZ6 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #75. Best score 210 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:91 P.jiroveci:8

Q8A8C3              	100.00%		L0PGJ9              	100.00%
                    	       		L0PDD1              	5.07%
Bootstrap support for Q8A8C3 as seed ortholog is 92%.
Bootstrap support for L0PGJ9 as seed ortholog is 53%.
Alternative seed ortholog is L0PG51 (8 bits away from this cluster)

Group of orthologs #76. Best score 204 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:204 P.jiroveci:204

Q8A639              	100.00%		L0PA65              	100.00%
Bootstrap support for Q8A639 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #77. Best score 204 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:204 P.jiroveci:204

Q8A5V6              	100.00%		L0PDH2              	100.00%
Bootstrap support for Q8A5V6 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #78. Best score 202 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:138 P.jiroveci:91

Q8A651              	100.00%		L0P6U6              	100.00%
Q8A158              	63.91%		
Q8A8C5              	7.47%		
Q8A8I1              	7.24%		
Bootstrap support for Q8A651 as seed ortholog is 99%.
Bootstrap support for L0P6U6 as seed ortholog is 95%.

Group of orthologs #79. Best score 195 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:195 P.jiroveci:195

Q8A0U0              	100.00%		L0P723              	100.00%
Bootstrap support for Q8A0U0 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #80. Best score 195 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:51 P.jiroveci:37

Q8A803              	100.00%		L0PBF6              	100.00%
Bootstrap support for Q8A803 as seed ortholog is 92%.
Bootstrap support for L0PBF6 as seed ortholog is 84%.

Group of orthologs #81. Best score 191 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:191 P.jiroveci:191

Q8A469              	100.00%		L0PG77              	100.00%
                    	       		L0P9P7              	11.37%
Bootstrap support for Q8A469 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #82. Best score 191 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:191 P.jiroveci:191

Q8A3A0              	100.00%		L0P9H4              	100.00%
Bootstrap support for Q8A3A0 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #83. Best score 187 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:187 P.jiroveci:187

Q8AAP9              	100.00%		L0PFD9              	100.00%
                    	       		L0P7N1              	8.24%
                    	       		L0PBA5              	8.17%
Bootstrap support for Q8AAP9 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #84. Best score 186 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:186 P.jiroveci:29

Q89ZR4              	100.00%		L0PAU1              	100.00%
Bootstrap support for Q89ZR4 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 76%.

Group of orthologs #85. Best score 185 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:185 P.jiroveci:185

Q8A1Q3              	100.00%		L0PEN4              	100.00%
Q8AAM8              	86.30%		
Q8A9M1              	13.03%		
Q89ZI0              	12.89%		
Bootstrap support for Q8A1Q3 as seed ortholog is 100%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #86. Best score 185 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:185 P.jiroveci:39

Q8AB01              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	63.83%
Bootstrap support for Q8AB01 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 79%.

Group of orthologs #87. Best score 184 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:184 P.jiroveci:184

Q8A011              	100.00%		L0PGW6              	100.00%
Q8A1V6              	5.80%		
Bootstrap support for Q8A011 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #88. Best score 181 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:181 P.jiroveci:30

Q8A0X6              	100.00%		L0P9R7              	100.00%
Bootstrap support for Q8A0X6 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 96%.

Group of orthologs #89. Best score 179 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:179 P.jiroveci:179

Q89Z26              	100.00%		L0PG43              	100.00%
Bootstrap support for Q89Z26 as seed ortholog is 100%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #90. Best score 178 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:178 P.jiroveci:178

Q8A1P8              	100.00%		L0PA45              	100.00%
Bootstrap support for Q8A1P8 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #91. Best score 173 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:173 P.jiroveci:173

Q8A601              	100.00%		L0P7D2              	100.00%
Bootstrap support for Q8A601 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #92. Best score 173 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.jiroveci:173

Q8A1V8              	100.00%		L0PGR0              	100.00%
Bootstrap support for Q8A1V8 as seed ortholog is 83%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #93. Best score 171 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:171 P.jiroveci:171

Q89YT0              	100.00%		L0P9I6              	100.00%
Bootstrap support for Q89YT0 as seed ortholog is 100%.
Bootstrap support for L0P9I6 as seed ortholog is 100%.

Group of orthologs #94. Best score 171 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:171 P.jiroveci:171

Q8A0U2              	100.00%		L0PF73              	100.00%
Bootstrap support for Q8A0U2 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #95. Best score 171 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:171 P.jiroveci:171

Q8A615              	100.00%		L0PB68              	100.00%
Bootstrap support for Q8A615 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #96. Best score 169 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:169 P.jiroveci:169

Q8A2U2              	100.00%		L0PFI7              	100.00%
Bootstrap support for Q8A2U2 as seed ortholog is 100%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #97. Best score 164 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:164 P.jiroveci:164

Q8A3X5              	100.00%		L0PCW8              	100.00%
Bootstrap support for Q8A3X5 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #98. Best score 164 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:164 P.jiroveci:164

Q8A476              	100.00%		L0PEZ4              	100.00%
Bootstrap support for Q8A476 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #99. Best score 159 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:159 P.jiroveci:48

Q8A479              	100.00%		L0PEA3              	100.00%
Bootstrap support for Q8A479 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 88%.

Group of orthologs #100. Best score 159 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:159 P.jiroveci:159

Q8A7E7              	100.00%		L0PF65              	100.00%
Bootstrap support for Q8A7E7 as seed ortholog is 100%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #101. Best score 153 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:153 P.jiroveci:153

Q8A1E0              	100.00%		L0PFS1              	100.00%
Bootstrap support for Q8A1E0 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #102. Best score 153 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:153 P.jiroveci:153

Q8A120              	100.00%		L0PG96              	100.00%
Bootstrap support for Q8A120 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #103. Best score 151 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:151 P.jiroveci:151

Q8A339              	100.00%		L0P9P0              	100.00%
Bootstrap support for Q8A339 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #104. Best score 151 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:151 P.jiroveci:151

Q8A0Q0              	100.00%		L0PF58              	100.00%
Bootstrap support for Q8A0Q0 as seed ortholog is 100%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #105. Best score 146 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:146 P.jiroveci:146

Q8A004              	100.00%		L0PFN8              	100.00%
Bootstrap support for Q8A004 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #106. Best score 145 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:145 P.jiroveci:145

Q8A0S5              	100.00%		L0PBE8              	100.00%
Bootstrap support for Q8A0S5 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #107. Best score 141 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:141 P.jiroveci:141

Q8A129              	100.00%		L0PC06              	100.00%
Bootstrap support for Q8A129 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #108. Best score 141 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:141 P.jiroveci:141

Q8A6M0              	100.00%		L0PCQ8              	100.00%
Bootstrap support for Q8A6M0 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #109. Best score 138 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:49 P.jiroveci:138

Q8ABF5              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	91.30%
Bootstrap support for Q8ABF5 as seed ortholog is 89%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #110. Best score 136 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:136 P.jiroveci:136

Q8A2P4              	100.00%		L0PAG1              	100.00%
Bootstrap support for Q8A2P4 as seed ortholog is 100%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #111. Best score 134 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:134 P.jiroveci:134

Q8A7G4              	100.00%		L0PFX9              	100.00%
Bootstrap support for Q8A7G4 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #112. Best score 134 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:67 P.jiroveci:76

Q8AB60              	100.00%		L0PD68              	100.00%
Bootstrap support for Q8AB60 as seed ortholog is 98%.
Bootstrap support for L0PD68 as seed ortholog is 98%.

Group of orthologs #113. Best score 133 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:133 P.jiroveci:133

Q8A876              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	76.69%
Bootstrap support for Q8A876 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #114. Best score 133 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:133 P.jiroveci:133

Q8A107              	100.00%		L0PAG8              	100.00%
Bootstrap support for Q8A107 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #115. Best score 132 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:132 P.jiroveci:132

Q8A7I7              	100.00%		L0P8V0              	100.00%
Bootstrap support for Q8A7I7 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #116. Best score 128 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:54 P.jiroveci:31

Q8A2J7              	100.00%		L0PBY2              	100.00%
Bootstrap support for Q8A2J7 as seed ortholog is 88%.
Bootstrap support for L0PBY2 as seed ortholog is 79%.

Group of orthologs #117. Best score 126 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:9 P.jiroveci:126

Q8A3X7              	100.00%		L0P8R6              	100.00%
Bootstrap support for Q8A3X7 as seed ortholog is 56%.
Alternative seed ortholog is Q8ABK5 (9 bits away from this cluster)
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #118. Best score 124 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:124 P.jiroveci:124

Q8AA27              	100.00%		L0P957              	100.00%
Q8A497              	11.22%		
Bootstrap support for Q8AA27 as seed ortholog is 100%.
Bootstrap support for L0P957 as seed ortholog is 100%.

Group of orthologs #119. Best score 120 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:45 P.jiroveci:120

Q8A190              	100.00%		L0PEZ1              	100.00%
Bootstrap support for Q8A190 as seed ortholog is 92%.
Bootstrap support for L0PEZ1 as seed ortholog is 100%.

Group of orthologs #120. Best score 120 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:120 P.jiroveci:120

Q8ABA5              	100.00%		L0PF68              	100.00%
Bootstrap support for Q8ABA5 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #121. Best score 119 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:119 P.jiroveci:119

Q89YP0              	100.00%		L0P7L9              	100.00%
Bootstrap support for Q89YP0 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #122. Best score 119 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:49 P.jiroveci:119

Q89ZF4              	100.00%		L0PET9              	100.00%
Bootstrap support for Q89ZF4 as seed ortholog is 92%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #123. Best score 119 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:119 P.jiroveci:119

Q8A842              	100.00%		L0P8Y0              	100.00%
Bootstrap support for Q8A842 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #124. Best score 119 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:49 P.jiroveci:119

Q8A908              	100.00%		L0PG08              	100.00%
Bootstrap support for Q8A908 as seed ortholog is 89%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #125. Best score 117 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:117 P.jiroveci:117

Q8AA35              	100.00%		L0PBX9              	100.00%
Bootstrap support for Q8AA35 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #126. Best score 116 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:116 P.jiroveci:68

Q8A472              	100.00%		L0P8A1              	100.00%
Bootstrap support for Q8A472 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 99%.

Group of orthologs #127. Best score 116 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:116 P.jiroveci:21

Q89ZJ0              	100.00%		L0PEX1              	100.00%
Bootstrap support for Q89ZJ0 as seed ortholog is 100%.
Bootstrap support for L0PEX1 as seed ortholog is 73%.
Alternative seed ortholog is L0P7E9 (21 bits away from this cluster)

Group of orthologs #128. Best score 114 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:114 P.jiroveci:114

Q8A0X9              	100.00%		L0PE74              	100.00%
Bootstrap support for Q8A0X9 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #129. Best score 112 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:112 P.jiroveci:112

Q8A807              	100.00%		L0PDL1              	100.00%
Bootstrap support for Q8A807 as seed ortholog is 100%.
Bootstrap support for L0PDL1 as seed ortholog is 100%.

Group of orthologs #130. Best score 109 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:20 P.jiroveci:57

Q8A195              	100.00%		L0P903              	100.00%
Q8A2S3              	12.67%		
Q8A6H3              	11.32%		
Bootstrap support for Q8A195 as seed ortholog is 67%.
Alternative seed ortholog is Q8ABI0 (20 bits away from this cluster)
Bootstrap support for L0P903 as seed ortholog is 95%.

Group of orthologs #131. Best score 109 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:109 P.jiroveci:109

Q8A699              	100.00%		L0PFR9              	100.00%
Bootstrap support for Q8A699 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #132. Best score 109 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:109 P.jiroveci:109

Q8A9W1              	100.00%		L0PDU5              	100.00%
Bootstrap support for Q8A9W1 as seed ortholog is 100%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #133. Best score 107 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:107 P.jiroveci:13

Q8A382              	100.00%		L0PCV1              	100.00%
Bootstrap support for Q8A382 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 65%.
Alternative seed ortholog is L0P9U8 (13 bits away from this cluster)

Group of orthologs #134. Best score 106 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.jiroveci:106

Q8A7I1              	100.00%		L0PDF1              	100.00%
Q8A7P5              	8.89%		
Bootstrap support for Q8A7I1 as seed ortholog is 78%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #135. Best score 106 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:106 P.jiroveci:30

Q8A756              	100.00%		L0PER3              	100.00%
Bootstrap support for Q8A756 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 74%.
Alternative seed ortholog is L0P7R5 (30 bits away from this cluster)

Group of orthologs #136. Best score 105 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:105 P.jiroveci:105

Q8A9D3              	100.00%		L0P8P0              	100.00%
Bootstrap support for Q8A9D3 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #137. Best score 104 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:104 P.jiroveci:104

Q8A0Z4              	100.00%		L0PFQ6              	100.00%
Bootstrap support for Q8A0Z4 as seed ortholog is 100%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #138. Best score 102 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:102 P.jiroveci:102

Q8A0H8              	100.00%		L0P8G8              	100.00%
Bootstrap support for Q8A0H8 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #139. Best score 102 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:102 P.jiroveci:102

Q8A165              	100.00%		L0PAA8              	100.00%
Bootstrap support for Q8A165 as seed ortholog is 100%.
Bootstrap support for L0PAA8 as seed ortholog is 100%.

Group of orthologs #140. Best score 101 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:101 P.jiroveci:101

Q8A517              	100.00%		L0PCH0              	100.00%
Bootstrap support for Q8A517 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #141. Best score 101 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:1 P.jiroveci:101

Q8A422              	100.00%		L0PGL1              	100.00%
Bootstrap support for Q8A422 as seed ortholog is 51%.
Alternative seed ortholog is Q8A5T4 (1 bits away from this cluster)
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #142. Best score 98 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:98 P.jiroveci:98

Q8A465              	100.00%		L0PCZ5              	100.00%
Bootstrap support for Q8A465 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #143. Best score 95 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:95 P.jiroveci:95

Q89YR6              	100.00%		L0PH96              	100.00%
Bootstrap support for Q89YR6 as seed ortholog is 100%.
Bootstrap support for L0PH96 as seed ortholog is 100%.

Group of orthologs #144. Best score 94 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:94 P.jiroveci:94

Q8A5U3              	100.00%		L0PBY6              	100.00%
Bootstrap support for Q8A5U3 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #145. Best score 94 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:94 P.jiroveci:94

Q8A8E7              	100.00%		L0PAW7              	100.00%
Bootstrap support for Q8A8E7 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #146. Best score 90 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:90 P.jiroveci:90

Q8A754              	100.00%		L0P8J0              	100.00%
Bootstrap support for Q8A754 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #147. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.jiroveci:89

Q8A488              	100.00%		L0PBK3              	100.00%
Bootstrap support for Q8A488 as seed ortholog is 100%.
Bootstrap support for L0PBK3 as seed ortholog is 100%.

Group of orthologs #148. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.jiroveci:89

Q8A9U6              	100.00%		L0P8C9              	100.00%
Bootstrap support for Q8A9U6 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #149. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.jiroveci:89

Q8AB02              	100.00%		L0PEG7              	100.00%
Bootstrap support for Q8AB02 as seed ortholog is 100%.
Bootstrap support for L0PEG7 as seed ortholog is 100%.

Group of orthologs #150. Best score 87 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:87 P.jiroveci:87

Q8AAI8              	100.00%		L0P6Q8              	100.00%
                    	       		L0PD82              	62.38%
Bootstrap support for Q8AAI8 as seed ortholog is 100%.
Bootstrap support for L0P6Q8 as seed ortholog is 100%.

Group of orthologs #151. Best score 87 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:87 P.jiroveci:87

Q8A734              	100.00%		L0PEU3              	100.00%
Bootstrap support for Q8A734 as seed ortholog is 100%.
Bootstrap support for L0PEU3 as seed ortholog is 100%.

Group of orthologs #152. Best score 86 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:86 P.jiroveci:86

Q8A677              	100.00%		L0PAN5              	100.00%
Bootstrap support for Q8A677 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #153. Best score 84 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:84 P.jiroveci:84

Q8A495              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	82.64%
Bootstrap support for Q8A495 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.

Group of orthologs #154. Best score 84 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:84 P.jiroveci:84

Q8A853              	100.00%		L0PEH1              	100.00%
                    	       		L0PCR9              	5.69%
Bootstrap support for Q8A853 as seed ortholog is 100%.
Bootstrap support for L0PEH1 as seed ortholog is 100%.

Group of orthologs #155. Best score 84 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:84 P.jiroveci:84

Q8A997              	100.00%		L0PIR9              	100.00%
Bootstrap support for Q8A997 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #156. Best score 83 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:83 P.jiroveci:83

Q8A0V4              	100.00%		L0PA92              	100.00%
                    	       		L0P8X8              	50.17%
Bootstrap support for Q8A0V4 as seed ortholog is 100%.
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #157. Best score 81 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:81 P.jiroveci:81

Q8A0Z6              	100.00%		L0PDS8              	100.00%
Bootstrap support for Q8A0Z6 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #158. Best score 81 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:81 P.jiroveci:81

Q8A878              	100.00%		L0PC79              	100.00%
Bootstrap support for Q8A878 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #159. Best score 81 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:81 P.jiroveci:81

Q8A7K2              	100.00%		L0PFU2              	100.00%
Bootstrap support for Q8A7K2 as seed ortholog is 100%.
Bootstrap support for L0PFU2 as seed ortholog is 100%.

Group of orthologs #160. Best score 79 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:79 P.jiroveci:79

Q8A857              	100.00%		L0P9Q1              	100.00%
Bootstrap support for Q8A857 as seed ortholog is 100%.
Bootstrap support for L0P9Q1 as seed ortholog is 100%.

Group of orthologs #161. Best score 79 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:79 P.jiroveci:79

Q8A616              	100.00%		L0PDR3              	100.00%
Bootstrap support for Q8A616 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #162. Best score 79 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:79 P.jiroveci:4

Q8AA10              	100.00%		L0PD77              	100.00%
Bootstrap support for Q8AA10 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 45%.
Alternative seed ortholog is L0PBW9 (4 bits away from this cluster)

Group of orthologs #163. Best score 77 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:77 P.jiroveci:77

Q89ZW8              	100.00%		L0PBL4              	100.00%
Bootstrap support for Q89ZW8 as seed ortholog is 100%.
Bootstrap support for L0PBL4 as seed ortholog is 100%.

Group of orthologs #164. Best score 77 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:15 P.jiroveci:77

Q8A405              	100.00%		L0PG86              	100.00%
Bootstrap support for Q8A405 as seed ortholog is 65%.
Alternative seed ortholog is Q8A400 (15 bits away from this cluster)
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #165. Best score 77 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:17 P.jiroveci:8

Q8AAQ5              	100.00%		L0PD97              	100.00%
Bootstrap support for Q8AAQ5 as seed ortholog is 64%.
Alternative seed ortholog is Q8A620 (17 bits away from this cluster)
Bootstrap support for L0PD97 as seed ortholog is 61%.
Alternative seed ortholog is L0P8G6 (8 bits away from this cluster)

Group of orthologs #166. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.jiroveci:76

Q8A5W2              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q8A5W2 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #167. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.jiroveci:24

Q8A499              	100.00%		L0PBR8              	100.00%
Bootstrap support for Q8A499 as seed ortholog is 100%.
Bootstrap support for L0PBR8 as seed ortholog is 88%.

Group of orthologs #168. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.jiroveci:76

Q89YX0              	100.00%		L0PHW2              	100.00%
Bootstrap support for Q89YX0 as seed ortholog is 100%.
Bootstrap support for L0PHW2 as seed ortholog is 100%.

Group of orthologs #169. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.jiroveci:76

Q8A8M1              	100.00%		L0P838              	100.00%
Bootstrap support for Q8A8M1 as seed ortholog is 100%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #170. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.jiroveci:76

Q8A749              	100.00%		L0PBL2              	100.00%
Bootstrap support for Q8A749 as seed ortholog is 100%.
Bootstrap support for L0PBL2 as seed ortholog is 100%.

Group of orthologs #171. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.jiroveci:76

Q8A628              	100.00%		L0PFC9              	100.00%
Bootstrap support for Q8A628 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #172. Best score 74 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:12 P.jiroveci:74

Q89ZS2              	100.00%		L0PF49              	100.00%
Bootstrap support for Q89ZS2 as seed ortholog is 61%.
Alternative seed ortholog is Q8ABQ7 (12 bits away from this cluster)
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #173. Best score 73 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:73 P.jiroveci:73

Q89ZB4              	100.00%		L0PB54              	100.00%
Bootstrap support for Q89ZB4 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #174. Best score 73 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:73 P.jiroveci:73

Q8A4A3              	100.00%		L0P724              	100.00%
Bootstrap support for Q8A4A3 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #175. Best score 73 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:73 P.jiroveci:73

Q8A630              	100.00%		L0PFQ3              	100.00%
Bootstrap support for Q8A630 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #176. Best score 72 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:72 P.jiroveci:28

Q8A4V3              	100.00%		L0PFW6              	100.00%
Q8A1M1              	32.66%		
Q8A9F5              	31.66%		
Q8A8F3              	31.41%		
Q8A7I9              	30.40%		
Q8A9X1              	30.15%		
Q8A7Q8              	28.39%		
Q8A6X4              	14.82%		
Q8A7Z8              	10.80%		
Q8A132              	8.04%		
Q8AB17              	6.28%		
Bootstrap support for Q8A4V3 as seed ortholog is 100%.
Bootstrap support for L0PFW6 as seed ortholog is 82%.

Group of orthologs #177. Best score 72 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:72 P.jiroveci:72

Q8A881              	100.00%		L0PAQ3              	100.00%
Q8A8R7              	70.58%		
Bootstrap support for Q8A881 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #178. Best score 71 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:71 P.jiroveci:71

Q8A2E6              	100.00%		L0PAS9              	100.00%
Bootstrap support for Q8A2E6 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #179. Best score 71 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:71 P.jiroveci:71

Q8A638              	100.00%		L0P7T1              	100.00%
Bootstrap support for Q8A638 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #180. Best score 70 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:21 P.jiroveci:70

Q8AB91              	100.00%		L0P9W7              	100.00%
Q8A5L0              	6.67%		
Q8A6H0              	5.19%		
Q8A7R8              	5.19%		
Bootstrap support for Q8AB91 as seed ortholog is 83%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #181. Best score 69 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:69 P.jiroveci:69

Q8A5K5              	100.00%		L0PDX2              	100.00%
Bootstrap support for Q8A5K5 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #182. Best score 69 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:69 P.jiroveci:69

Q8A491              	100.00%		L0PFP9              	100.00%
Bootstrap support for Q8A491 as seed ortholog is 100%.
Bootstrap support for L0PFP9 as seed ortholog is 100%.

Group of orthologs #183. Best score 68 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:68 P.jiroveci:5

Q8A433              	100.00%		L0PFI0              	100.00%
                    	       		L0PG16              	6.80%
                    	       		L0PFB1              	6.32%
                    	       		L0PAG6              	6.22%
Bootstrap support for Q8A433 as seed ortholog is 100%.
Bootstrap support for L0PFI0 as seed ortholog is 55%.
Alternative seed ortholog is L0PAR1 (5 bits away from this cluster)

Group of orthologs #184. Best score 67 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:67 P.jiroveci:67

Q8A8C4              	100.00%		L0P8K4              	100.00%
Bootstrap support for Q8A8C4 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #185. Best score 67 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:67 P.jiroveci:67

Q8A3H9              	100.00%		L0PFK9              	100.00%
Bootstrap support for Q8A3H9 as seed ortholog is 100%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #186. Best score 65 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:65 P.jiroveci:65

Q8A2E8              	100.00%		L0PGY1              	100.00%
Bootstrap support for Q8A2E8 as seed ortholog is 100%.
Bootstrap support for L0PGY1 as seed ortholog is 100%.

Group of orthologs #187. Best score 65 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:65 P.jiroveci:65

Q8A6P7              	100.00%		L0PD91              	100.00%
Bootstrap support for Q8A6P7 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #188. Best score 64 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:20 P.jiroveci:5

Q8A2Q7              	100.00%		L0P6Z2              	100.00%
Q8A5Y6              	6.37%		
Bootstrap support for Q8A2Q7 as seed ortholog is 70%.
Alternative seed ortholog is Q8A1N2 (20 bits away from this cluster)
Bootstrap support for L0P6Z2 as seed ortholog is 53%.
Alternative seed ortholog is L0PDU8 (5 bits away from this cluster)

Group of orthologs #189. Best score 63 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:63 P.jiroveci:63

Q8A0S7              	100.00%		L0PAI4              	100.00%
                    	       		L0PEY0              	23.76%
Bootstrap support for Q8A0S7 as seed ortholog is 100%.
Bootstrap support for L0PAI4 as seed ortholog is 100%.

Group of orthologs #190. Best score 63 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:63 P.jiroveci:63

Q8A486              	100.00%		L0PCA8              	100.00%
Bootstrap support for Q8A486 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #191. Best score 62 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:62 P.jiroveci:62

Q8A466              	100.00%		L0P8C5              	100.00%
                    	       		L0P7X3              	61.36%
Bootstrap support for Q8A466 as seed ortholog is 100%.
Bootstrap support for L0P8C5 as seed ortholog is 100%.

Group of orthologs #192. Best score 62 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:62 P.jiroveci:62

Q8AAD7              	100.00%		L0P9H8              	100.00%
Bootstrap support for Q8AAD7 as seed ortholog is 100%.
Bootstrap support for L0P9H8 as seed ortholog is 100%.

Group of orthologs #193. Best score 62 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:62 P.jiroveci:62

Q8AB68              	100.00%		L0PC89              	100.00%
Bootstrap support for Q8AB68 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #194. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.jiroveci:61

Q8A483              	100.00%		L0P875              	100.00%
Bootstrap support for Q8A483 as seed ortholog is 100%.
Bootstrap support for L0P875 as seed ortholog is 100%.

Group of orthologs #195. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.jiroveci:61

Q8A9E0              	100.00%		L0P746              	100.00%
Bootstrap support for Q8A9E0 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #196. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.jiroveci:61

Q8A1D5              	100.00%		L0PHP6              	100.00%
Bootstrap support for Q8A1D5 as seed ortholog is 100%.
Bootstrap support for L0PHP6 as seed ortholog is 100%.

Group of orthologs #197. Best score 59 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:59 P.jiroveci:59

Q89ZY4              	100.00%		L0P949              	100.00%
Bootstrap support for Q89ZY4 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #198. Best score 59 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:59 P.jiroveci:59

Q89ZB9              	100.00%		L0PA48              	100.00%
Bootstrap support for Q89ZB9 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #199. Best score 58 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:58 P.jiroveci:58

Q8A2E5              	100.00%		L0PCU7              	100.00%
Q8A3S1              	11.02%		
Q8A7Z3              	6.34%		
Bootstrap support for Q8A2E5 as seed ortholog is 100%.
Bootstrap support for L0PCU7 as seed ortholog is 100%.

Group of orthologs #200. Best score 58 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:58 P.jiroveci:58

Q8A0W0              	100.00%		L0PE61              	100.00%
Bootstrap support for Q8A0W0 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #201. Best score 57 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:57 P.jiroveci:57

Q8A1F4              	100.00%		L0P852              	100.00%
Q8AA23              	10.88%		
Q8A194              	6.18%		
Bootstrap support for Q8A1F4 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #202. Best score 55 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:55 P.jiroveci:55

Q8A485              	100.00%		L0PBX7              	100.00%
Q8ABV5              	12.80%		
Bootstrap support for Q8A485 as seed ortholog is 100%.
Bootstrap support for L0PBX7 as seed ortholog is 100%.

Group of orthologs #203. Best score 55 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:55 P.jiroveci:55

Q8A9P7              	100.00%		L0PG31              	100.00%
Bootstrap support for Q8A9P7 as seed ortholog is 100%.
Bootstrap support for L0PG31 as seed ortholog is 100%.

Group of orthologs #204. Best score 54 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:54 P.jiroveci:54

Q8A1M2              	100.00%		L0PC85              	100.00%
Bootstrap support for Q8A1M2 as seed ortholog is 100%.
Bootstrap support for L0PC85 as seed ortholog is 100%.

Group of orthologs #205. Best score 54 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:54 P.jiroveci:54

Q8A7D1              	100.00%		L0PDK5              	100.00%
Bootstrap support for Q8A7D1 as seed ortholog is 100%.
Bootstrap support for L0PDK5 as seed ortholog is 100%.

Group of orthologs #206. Best score 53 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:53 P.jiroveci:53

Q8AA85              	100.00%		L0PE53              	100.00%
Q89ZJ2              	13.80%		
Bootstrap support for Q8AA85 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #207. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:3 P.jiroveci:52

Q8AAK1              	100.00%		L0P8N0              	100.00%
Q8A669              	54.24%		
Bootstrap support for Q8AAK1 as seed ortholog is 53%.
Alternative seed ortholog is Q8A823 (3 bits away from this cluster)
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #208. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.jiroveci:52

Q8A767              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	100.00%
Bootstrap support for Q8A767 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.

Group of orthologs #209. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.jiroveci:52

Q8A475              	100.00%		L0P9N4              	100.00%
Bootstrap support for Q8A475 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #210. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.jiroveci:52

Q8A100              	100.00%		L0PFT7              	100.00%
Bootstrap support for Q8A100 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #211. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.jiroveci:52

Q8A4V8              	100.00%		L0PF41              	100.00%
Bootstrap support for Q8A4V8 as seed ortholog is 100%.
Bootstrap support for L0PF41 as seed ortholog is 100%.

Group of orthologs #212. Best score 51 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:51 P.jiroveci:51

Q89ZP4              	100.00%		L0P884              	100.00%
Bootstrap support for Q89ZP4 as seed ortholog is 100%.
Bootstrap support for L0P884 as seed ortholog is 100%.

Group of orthologs #213. Best score 50 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:50 P.jiroveci:50

Q8ABE5              	100.00%		L0PBU9              	100.00%
Q8A3H8              	23.01%		
Q8A1P7              	9.73%		
Bootstrap support for Q8ABE5 as seed ortholog is 100%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #214. Best score 50 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:50 P.jiroveci:50

Q89Z19              	100.00%		L0P7L7              	100.00%
Bootstrap support for Q89Z19 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #215. Best score 49 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:49 P.jiroveci:49

Q8A4A1              	100.00%		L0PBS4              	100.00%
Bootstrap support for Q8A4A1 as seed ortholog is 100%.
Bootstrap support for L0PBS4 as seed ortholog is 100%.

Group of orthologs #216. Best score 47 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:47 P.jiroveci:47

Q8A007              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	97.04%
Bootstrap support for Q8A007 as seed ortholog is 100%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #217. Best score 47 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:47 P.jiroveci:47

Q8A0Y8              	100.00%		L0PCF1              	100.00%
Bootstrap support for Q8A0Y8 as seed ortholog is 100%.
Bootstrap support for L0PCF1 as seed ortholog is 100%.

Group of orthologs #218. Best score 45 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:45 P.jiroveci:45

Q8A473              	100.00%		L0P8D1              	100.00%
Bootstrap support for Q8A473 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #219. Best score 45 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:45 P.jiroveci:45

Q8AAP3              	100.00%		L0PAL8              	100.00%
Bootstrap support for Q8AAP3 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #220. Best score 45 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:45 P.jiroveci:45

Q8A848              	100.00%		L0PFU0              	100.00%
Bootstrap support for Q8A848 as seed ortholog is 100%.
Bootstrap support for L0PFU0 as seed ortholog is 100%.

Group of orthologs #221. Best score 44 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.jiroveci:44

Q8A459              	100.00%		L0PCK2              	100.00%
Bootstrap support for Q8A459 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #222. Best score 44 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.jiroveci:44

Q8A0Z5              	100.00%		L0PGZ5              	100.00%
Bootstrap support for Q8A0Z5 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #223. Best score 42 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:42 P.jiroveci:42

Q45791              	100.00%		L0PDH7              	100.00%
                    	       		L0PFP2              	39.84%
Bootstrap support for Q45791 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #224. Best score 42 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:42 P.jiroveci:42

Q8A399              	100.00%		L0PD02              	100.00%
Bootstrap support for Q8A399 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.