###################################
279 groups of orthologs
353 in-paralogs from C.reinhardtii
289 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 887 bits
Score difference with first non-orthologous sequence - C.reinhardtii:617 C.trachomatis:774

A8J9F3              	100.00%		O84022              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 798 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 C.trachomatis:177

A8I972              	100.00%		O84115              	100.00%
Bootstrap support for A8I972 as seed ortholog is 100%.
Bootstrap support for O84115 as seed ortholog is 99%.

Group of orthologs #3. Best score 750 bits
Score difference with first non-orthologous sequence - C.reinhardtii:561 C.trachomatis:750

A8IA39              	100.00%		O84444              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #4. Best score 733 bits
Score difference with first non-orthologous sequence - C.reinhardtii:733 C.trachomatis:733

A8IYK1              	100.00%		O84250              	100.00%
Q2VA40              	16.06%		
Bootstrap support for A8IYK1 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #5. Best score 714 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 C.trachomatis:714

A8IZU0              	100.00%		P17821              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 75%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #6. Best score 613 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 C.trachomatis:544

A8IU68              	100.00%		O84304              	100.00%
Bootstrap support for A8IU68 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #7. Best score 560 bits
Score difference with first non-orthologous sequence - C.reinhardtii:560 C.trachomatis:560

A8IB17              	100.00%		P0CE22              	100.00%
Bootstrap support for A8IB17 as seed ortholog is 100%.
Bootstrap support for P0CE22 as seed ortholog is 100%.

Group of orthologs #8. Best score 548 bits
Score difference with first non-orthologous sequence - C.reinhardtii:548 C.trachomatis:548

A8IBR6              	100.00%		P0CD73              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #9. Best score 548 bits
Score difference with first non-orthologous sequence - C.reinhardtii:548 C.trachomatis:548

A8IVG0              	100.00%		O84057              	100.00%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #10. Best score 541 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 C.trachomatis:371

A8JIB7              	100.00%		P0C0Z7              	100.00%
Bootstrap support for A8JIB7 as seed ortholog is 87%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #11. Best score 534 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 C.trachomatis:534

A8IE89              	100.00%		O84067              	100.00%
Bootstrap support for A8IE89 as seed ortholog is 99%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #12. Best score 519 bits
Score difference with first non-orthologous sequence - C.reinhardtii:519 C.trachomatis:298

A8IIG8              	100.00%		O84193              	100.00%
Bootstrap support for A8IIG8 as seed ortholog is 100%.
Bootstrap support for O84193 as seed ortholog is 100%.

Group of orthologs #13. Best score 517 bits
Score difference with first non-orthologous sequence - C.reinhardtii:517 C.trachomatis:517

A8IAN1              	100.00%		O84755              	100.00%
Bootstrap support for A8IAN1 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 100%.

Group of orthologs #14. Best score 509 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 C.trachomatis:193

A8JID6              	100.00%		O84068              	100.00%
Bootstrap support for A8JID6 as seed ortholog is 87%.
Bootstrap support for O84068 as seed ortholog is 100%.

Group of orthologs #15. Best score 497 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 C.trachomatis:497

P17746              	100.00%		P0CD71              	100.00%
Bootstrap support for P17746 as seed ortholog is 34%.
Alternative seed ortholog is A8HXR2 (12 bits away from this cluster)
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #16. Best score 492 bits
Score difference with first non-orthologous sequence - C.reinhardtii:492 C.trachomatis:492

A8JDR3              	100.00%		O84834              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #17. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 C.trachomatis:485

A8IL08              	100.00%		O84848              	100.00%
A8J6C7              	9.32%		
Bootstrap support for A8IL08 as seed ortholog is 93%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #18. Best score 481 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 C.trachomatis:481

A8J462              	100.00%		O84754              	100.00%
Bootstrap support for A8J462 as seed ortholog is 88%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #19. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:458 C.trachomatis:458

A8ILN4              	100.00%		O84060              	100.00%
Bootstrap support for A8ILN4 as seed ortholog is 100%.
Bootstrap support for O84060 as seed ortholog is 100%.

Group of orthologs #20. Best score 453 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 C.trachomatis:453

A8JGF4              	100.00%		O84126              	100.00%
Bootstrap support for A8JGF4 as seed ortholog is 92%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #21. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:448 C.trachomatis:448

A8J387              	100.00%		O84460              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #22. Best score 448 bits
Score difference with first non-orthologous sequence - C.reinhardtii:448 C.trachomatis:448

A8J9S8              	100.00%		O84849              	100.00%
Bootstrap support for A8J9S8 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #23. Best score 443 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 C.trachomatis:443

A8JDE3              	100.00%		O84207              	100.00%
A8JDE6              	100.00%		
Bootstrap support for A8JDE3 as seed ortholog is 99%.
Bootstrap support for A8JDE6 as seed ortholog is 99%.
Bootstrap support for O84207 as seed ortholog is 100%.

Group of orthologs #24. Best score 441 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 C.trachomatis:441

A8J1A0              	100.00%		O84546              	100.00%
Bootstrap support for A8J1A0 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #25. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:438 C.trachomatis:438

A8HPT8              	100.00%		O84863              	100.00%
Bootstrap support for A8HPT8 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #26. Best score 426 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 C.trachomatis:426

A8JCK1              	100.00%		O84775              	100.00%
Bootstrap support for A8JCK1 as seed ortholog is 93%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #27. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:421 C.trachomatis:421

A8J5F7              	100.00%		O84066              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #28. Best score 419 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 C.trachomatis:419

A8J7L5              	100.00%		O84046              	100.00%
Bootstrap support for A8J7L5 as seed ortholog is 61%.
Alternative seed ortholog is A8JBU2 (22 bits away from this cluster)
Bootstrap support for O84046 as seed ortholog is 100%.

Group of orthologs #29. Best score 417 bits
Score difference with first non-orthologous sequence - C.reinhardtii:417 C.trachomatis:417

A8JE40              	100.00%		O84690              	100.00%
Bootstrap support for A8JE40 as seed ortholog is 100%.
Bootstrap support for O84690 as seed ortholog is 100%.

Group of orthologs #30. Best score 413 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 C.trachomatis:413

A8IFZ9              	100.00%		O84172              	100.00%
Bootstrap support for A8IFZ9 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #31. Best score 410 bits
Score difference with first non-orthologous sequence - C.reinhardtii:2 C.trachomatis:410

A8HVM3              	100.00%		O84585              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 48%.
Alternative seed ortholog is A8ICN7 (2 bits away from this cluster)
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #32. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 C.trachomatis:396

A8II62              	100.00%		O84649              	100.00%
Bootstrap support for A8II62 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #33. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 C.trachomatis:299

A8JFW4              	100.00%		O84335              	100.00%
Bootstrap support for A8JFW4 as seed ortholog is 100%.
Bootstrap support for O84335 as seed ortholog is 100%.

Group of orthologs #34. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 C.trachomatis:367

A8JHR9              	100.00%		P0CE13              	100.00%
Bootstrap support for A8JHR9 as seed ortholog is 98%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #35. Best score 366 bits
Score difference with first non-orthologous sequence - C.reinhardtii:366 C.trachomatis:366

A8IWJ8              	100.00%		O84829              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #36. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 C.trachomatis:364

A8IIN4              	100.00%		O84006              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 100%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #37. Best score 362 bits
Score difference with first non-orthologous sequence - C.reinhardtii:362 C.trachomatis:362

A8I164              	100.00%		O84310              	100.00%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #38. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 C.trachomatis:358

A8JH98              	100.00%		O84591              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #39. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 C.trachomatis:355

Q8HTL6              	100.00%		P0CE09              	100.00%
Bootstrap support for Q8HTL6 as seed ortholog is 99%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #40. Best score 344 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 C.trachomatis:344

A8HR39              	100.00%		O84094              	100.00%
Bootstrap support for A8HR39 as seed ortholog is 99%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #41. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 C.trachomatis:340

A8JC04              	100.00%		P0CD78              	100.00%
Bootstrap support for A8JC04 as seed ortholog is 96%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #42. Best score 337 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 C.trachomatis:337

A8J1T4              	100.00%		O84561              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #43. Best score 335 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 C.trachomatis:335

A8JFV6              	100.00%		O84101              	100.00%
A8I208              	9.94%		
Bootstrap support for A8JFV6 as seed ortholog is 62%.
Alternative seed ortholog is A8HNQ7 (11 bits away from this cluster)
Bootstrap support for O84101 as seed ortholog is 100%.

Group of orthologs #44. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 C.trachomatis:326

A8JBC7              	100.00%		O84248              	100.00%
Bootstrap support for A8JBC7 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #45. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:323 C.trachomatis:323

A8J0C8              	100.00%		O84865              	100.00%
Bootstrap support for A8J0C8 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #46. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 C.trachomatis:313

A8J6D5              	100.00%		O84732              	100.00%
Bootstrap support for A8J6D5 as seed ortholog is 96%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #47. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 C.trachomatis:310

A8J7C8              	100.00%		O84786              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 83%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #48. Best score 310 bits
Score difference with first non-orthologous sequence - C.reinhardtii:310 C.trachomatis:310

A8JAY5              	100.00%		O84065              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #49. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 C.trachomatis:308

A8I670              	100.00%		P0CD80              	100.00%
Bootstrap support for A8I670 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #50. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:305 C.trachomatis:305

A8IVR6              	100.00%		P0CE21              	100.00%
A8J104              	8.63%		
Bootstrap support for A8IVR6 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #51. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 C.trachomatis:304

A8IW39              	100.00%		O84395              	100.00%
Bootstrap support for A8IW39 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #52. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 C.trachomatis:304

A8IZE7              	100.00%		O84823              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #53. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 C.trachomatis:298

A8JBA1              	100.00%		O84548              	100.00%
Bootstrap support for A8JBA1 as seed ortholog is 98%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #54. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 C.trachomatis:295

Q9FNS5              	100.00%		O84381              	100.00%
Bootstrap support for Q9FNS5 as seed ortholog is 99%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #55. Best score 293 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 C.trachomatis:293

A8JFI7              	100.00%		O84106              	100.00%
Bootstrap support for A8JFI7 as seed ortholog is 100%.
Bootstrap support for O84106 as seed ortholog is 100%.

Group of orthologs #56. Best score 286 bits
Score difference with first non-orthologous sequence - C.reinhardtii:286 C.trachomatis:286

A8JF79              	100.00%		O84383              	100.00%
Bootstrap support for A8JF79 as seed ortholog is 100%.
Bootstrap support for O84383 as seed ortholog is 100%.

Group of orthologs #57. Best score 284 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 C.trachomatis:284

A8I629              	100.00%		O84451              	100.00%
Bootstrap support for A8I629 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #58. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 C.trachomatis:283

A8IRZ2              	100.00%		O84316              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #59. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 C.trachomatis:282

A8J8T9              	100.00%		O84711              	100.00%
Bootstrap support for A8J8T9 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #60. Best score 281 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 C.trachomatis:281

A8I8V5              	100.00%		O84035              	100.00%
Bootstrap support for A8I8V5 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #61. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 C.trachomatis:272

A8J2F9              	100.00%		O84026              	100.00%
Bootstrap support for A8J2F9 as seed ortholog is 45%.
Alternative seed ortholog is A8J3C4 (3 bits away from this cluster)
Bootstrap support for O84026 as seed ortholog is 100%.

Group of orthologs #62. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 C.trachomatis:270

A8HS14              	100.00%		O84496              	100.00%
Q9LLL6              	24.70%		
A8IS59              	12.82%		
Bootstrap support for A8HS14 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #63. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 C.trachomatis:270

A8IE23              	100.00%		P0CD72              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #64. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 C.trachomatis:270

A8J646              	100.00%		O84267              	100.00%
Bootstrap support for A8J646 as seed ortholog is 100%.
Bootstrap support for O84267 as seed ortholog is 100%.

Group of orthologs #65. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 C.trachomatis:269

A8IQ05              	100.00%		O84828              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #66. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 C.trachomatis:268

A8J4R9              	100.00%		O84439              	100.00%
Q8W4V3              	45.99%		
A8JFK4              	40.69%		
Bootstrap support for A8J4R9 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #67. Best score 268 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 C.trachomatis:130

A8ITS8              	100.00%		O84058              	100.00%
Bootstrap support for A8ITS8 as seed ortholog is 100%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #68. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 C.trachomatis:266

Q8HTL2              	100.00%		O84530              	100.00%
Bootstrap support for Q8HTL2 as seed ortholog is 94%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #69. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 C.trachomatis:265

A8J0U1              	100.00%		O84698              	100.00%
A8J0U0              	97.44%		
A8J0U2              	69.74%		
A8J0U4              	68.72%		
A8J993              	67.79%		
A8J399              	25.74%		
A8ILT7              	24.62%		
A8JH07              	19.69%		
Q8LP67              	19.69%		
A8ILI7              	8.82%		
Bootstrap support for A8J0U1 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #70. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 C.trachomatis:263

A8J7H3              	100.00%		O84212              	100.00%
Bootstrap support for A8J7H3 as seed ortholog is 99%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #71. Best score 262 bits
Score difference with first non-orthologous sequence - C.reinhardtii:262 C.trachomatis:262

A8I980              	100.00%		O84638              	100.00%
Bootstrap support for A8I980 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #72. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 C.trachomatis:261

A8J2Z6              	100.00%		O84373              	100.00%
Bootstrap support for A8J2Z6 as seed ortholog is 100%.
Bootstrap support for O84373 as seed ortholog is 100%.

Group of orthologs #73. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 C.trachomatis:117

A8J1V5              	100.00%		O84249              	100.00%
A8HYH4              	21.44%		
Bootstrap support for A8J1V5 as seed ortholog is 96%.
Bootstrap support for O84249 as seed ortholog is 99%.

Group of orthologs #74. Best score 256 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 C.trachomatis:256

A8J5J3              	100.00%		O84693              	100.00%
Bootstrap support for A8J5J3 as seed ortholog is 99%.
Bootstrap support for O84693 as seed ortholog is 100%.

Group of orthologs #75. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 C.trachomatis:255

Q66YD3              	100.00%		O84345              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 82%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #76. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 C.trachomatis:253

A8HP30              	100.00%		O84736              	100.00%
Bootstrap support for A8HP30 as seed ortholog is 100%.
Bootstrap support for O84736 as seed ortholog is 100%.

Group of orthologs #77. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 C.trachomatis:252

A8JAA8              	100.00%		O84704              	100.00%
Bootstrap support for A8JAA8 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #78. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 C.trachomatis:250

A8HQP0              	100.00%		O84315              	100.00%
Bootstrap support for A8HQP0 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #79. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 C.trachomatis:249

A8JHU1              	100.00%		O84295              	100.00%
Bootstrap support for A8JHU1 as seed ortholog is 100%.
Bootstrap support for O84295 as seed ortholog is 100%.

Group of orthologs #80. Best score 246 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 C.trachomatis:246

A8IA45              	100.00%		O84309              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #81. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 C.trachomatis:243

A8JCV0              	100.00%		O84787              	100.00%
Bootstrap support for A8JCV0 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #82. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 C.trachomatis:238

A8JCW5              	100.00%		O84049              	100.00%
Bootstrap support for A8JCW5 as seed ortholog is 99%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #83. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 C.trachomatis:237

A8I263              	100.00%		O84642              	100.00%
A8J129              	32.69%		
A8HXW8              	14.72%		
Bootstrap support for A8I263 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #84. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 C.trachomatis:237

A8JEU8              	100.00%		O84352              	100.00%
Bootstrap support for A8JEU8 as seed ortholog is 47%.
Alternative seed ortholog is A8JC09 (3 bits away from this cluster)
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #85. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 C.trachomatis:236

A8JEI0              	100.00%		O84089              	100.00%
Bootstrap support for A8JEI0 as seed ortholog is 98%.
Bootstrap support for O84089 as seed ortholog is 100%.

Group of orthologs #86. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 C.trachomatis:235

A8J758              	100.00%		O84028              	100.00%
Bootstrap support for A8J758 as seed ortholog is 89%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #87. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 C.trachomatis:232

A8IB12              	100.00%		O84423              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 99%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #88. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 C.trachomatis:228

A8I2V9              	100.00%		O84562              	100.00%
A8JGF7              	18.65%		
Bootstrap support for A8I2V9 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #89. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 C.trachomatis:227

A8HP06              	100.00%		O84596              	100.00%
A8J5A6              	5.73%		
Bootstrap support for A8HP06 as seed ortholog is 99%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #90. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 C.trachomatis:225

A8JH65              	100.00%		O84081              	100.00%
A8IFV5              	6.09%		
Bootstrap support for A8JH65 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #91. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 C.trachomatis:225

A8JFB3              	100.00%		O84804              	100.00%
O64927              	8.93%		
Bootstrap support for A8JFB3 as seed ortholog is 90%.
Bootstrap support for O84804 as seed ortholog is 100%.

Group of orthologs #92. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 C.trachomatis:220

A8J0R2              	100.00%		O84813              	100.00%
Bootstrap support for A8J0R2 as seed ortholog is 100%.
Bootstrap support for O84813 as seed ortholog is 100%.

Group of orthologs #93. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 C.trachomatis:219

A8IS14              	100.00%		P28539              	100.00%
Bootstrap support for A8IS14 as seed ortholog is 99%.
Bootstrap support for P28539 as seed ortholog is 100%.

Group of orthologs #94. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 C.trachomatis:218

A8JAX1              	100.00%		O84296              	100.00%
Bootstrap support for A8JAX1 as seed ortholog is 97%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #95. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 C.trachomatis:216

A8J8J8              	100.00%		O84709              	100.00%
Bootstrap support for A8J8J8 as seed ortholog is 86%.
Bootstrap support for O84709 as seed ortholog is 100%.

Group of orthologs #96. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 C.trachomatis:215

A8ITJ3              	100.00%		O84691              	100.00%
Bootstrap support for A8ITJ3 as seed ortholog is 100%.
Bootstrap support for O84691 as seed ortholog is 100%.

Group of orthologs #97. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 C.trachomatis:211

A8IY85              	100.00%		O84074              	100.00%
Bootstrap support for A8IY85 as seed ortholog is 100%.
Bootstrap support for O84074 as seed ortholog is 100%.

Group of orthologs #98. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 C.trachomatis:208

A8JHZ6              	100.00%		O84613              	100.00%
Bootstrap support for A8JHZ6 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #99. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 C.trachomatis:205

A8HP81              	100.00%		O84465              	100.00%
Bootstrap support for A8HP81 as seed ortholog is 91%.
Bootstrap support for O84465 as seed ortholog is 100%.

Group of orthologs #100. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 C.trachomatis:203

A8J1D2              	100.00%		O84812              	100.00%
Bootstrap support for A8J1D2 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #101. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 C.trachomatis:200

A8J1Z0              	100.00%		O84859              	100.00%
A8J8C1              	12.03%		
Bootstrap support for A8J1Z0 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #102. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 C.trachomatis:200

A8J825              	100.00%		Q59321              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #103. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 C.trachomatis:200

A8JGX1              	100.00%		O84196              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #104. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 C.trachomatis:196

A8HPD2              	100.00%		O84297              	100.00%
Bootstrap support for A8HPD2 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #105. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 C.trachomatis:65

A8IL21              	100.00%		O84712              	100.00%
A8J5V8              	100.00%		
Bootstrap support for A8IL21 as seed ortholog is 99%.
Bootstrap support for A8J5V8 as seed ortholog is 99%.
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #106. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 C.trachomatis:193

A8J130              	100.00%		O84719              	100.00%
A8IKS4              	9.72%		
Bootstrap support for A8J130 as seed ortholog is 99%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #107. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 C.trachomatis:193

Q84X75              	100.00%		P38004              	100.00%
Bootstrap support for Q84X75 as seed ortholog is 92%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #108. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 C.trachomatis:191

A8I8Z4              	100.00%		O84320              	100.00%
Bootstrap support for A8I8Z4 as seed ortholog is 97%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #109. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 C.trachomatis:191

A8IN79              	100.00%		O84632              	100.00%
Bootstrap support for A8IN79 as seed ortholog is 100%.
Bootstrap support for O84632 as seed ortholog is 100%.

Group of orthologs #110. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:191 C.trachomatis:191

A8IV15              	100.00%		O84289              	100.00%
Bootstrap support for A8IV15 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #111. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 C.trachomatis:190

A8IRT6              	100.00%		O84734              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #112. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 C.trachomatis:189

Q9FE86              	100.00%		O84608              	100.00%
A8I2V3              	19.20%		
A8JIT5              	10.51%		
Bootstrap support for Q9FE86 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #113. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 C.trachomatis:187

A8JHL7              	100.00%		O84242              	100.00%
Bootstrap support for A8JHL7 as seed ortholog is 100%.
Bootstrap support for O84242 as seed ortholog is 100%.

Group of orthologs #114. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 C.trachomatis:185

A8IV25              	100.00%		O84007              	100.00%
Bootstrap support for A8IV25 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #115. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 C.trachomatis:181

A8J7X0              	100.00%		O84864              	100.00%
Bootstrap support for A8J7X0 as seed ortholog is 83%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #116. Best score 181 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 C.trachomatis:181

Q5S7Y5              	100.00%		O84332              	100.00%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #117. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 C.trachomatis:69

A8I0J4              	100.00%		O84406              	100.00%
Bootstrap support for A8I0J4 as seed ortholog is 100%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #118. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 C.trachomatis:71

A8IAF7              	100.00%		O84665              	100.00%
Bootstrap support for A8IAF7 as seed ortholog is 99%.
Bootstrap support for O84665 as seed ortholog is 96%.

Group of orthologs #119. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 C.trachomatis:57

A8JBF2              	100.00%		O84757              	100.00%
Bootstrap support for A8JBF2 as seed ortholog is 99%.
Bootstrap support for O84757 as seed ortholog is 99%.

Group of orthologs #120. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 C.trachomatis:176

A8IQU3              	100.00%		O84676              	100.00%
P06541              	48.19%		O84722              	10.78%
Bootstrap support for A8IQU3 as seed ortholog is 82%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #121. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 C.trachomatis:175

A8II54              	100.00%		O84266              	100.00%
Q6VTH1              	49.23%		
A8J6S4              	28.12%		
Bootstrap support for A8II54 as seed ortholog is 72%.
Alternative seed ortholog is A8JBH0 (19 bits away from this cluster)
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #122. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 C.trachomatis:174

A8JFE1              	100.00%		O84703              	100.00%
Bootstrap support for A8JFE1 as seed ortholog is 100%.
Bootstrap support for O84703 as seed ortholog is 100%.

Group of orthologs #123. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 C.trachomatis:173

P14149              	100.00%		P66370              	100.00%
Bootstrap support for P14149 as seed ortholog is 92%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #124. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 C.trachomatis:172

A8J831              	100.00%		O84827              	100.00%
Bootstrap support for A8J831 as seed ortholog is 100%.
Bootstrap support for O84827 as seed ortholog is 100%.

Group of orthologs #125. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 C.trachomatis:168

A8I8S8              	100.00%		O84478              	100.00%
A8J0C2              	77.05%		
A8HV32              	18.68%		
Bootstrap support for A8I8S8 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #126. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 C.trachomatis:168

A8ITS3              	100.00%		O84614              	100.00%
Bootstrap support for A8ITS3 as seed ortholog is 100%.
Bootstrap support for O84614 as seed ortholog is 100%.

Group of orthologs #127. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 C.trachomatis:166

A8JAR5              	100.00%		O84200              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #128. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 C.trachomatis:166

Q8HTL1              	100.00%		P0CD88              	100.00%
Bootstrap support for Q8HTL1 as seed ortholog is 100%.
Bootstrap support for P0CD88 as seed ortholog is 100%.

Group of orthologs #129. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 C.trachomatis:165

A8JCC5              	100.00%		O84456              	100.00%
Bootstrap support for A8JCC5 as seed ortholog is 94%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #130. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 C.trachomatis:163

A8HW52              	100.00%		O84874              	100.00%
A8IHX1              	74.28%		
A8J2H1              	37.73%		
Bootstrap support for A8HW52 as seed ortholog is 88%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #131. Best score 163 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 C.trachomatis:163

A8IKW6              	100.00%		O84123              	100.00%
Bootstrap support for A8IKW6 as seed ortholog is 72%.
Alternative seed ortholog is A8I2N1 (16 bits away from this cluster)
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #132. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 C.trachomatis:161

A8HSM1              	100.00%		O84824              	100.00%
                    	       		O84825              	53.11%
Bootstrap support for A8HSM1 as seed ortholog is 100%.
Bootstrap support for O84824 as seed ortholog is 100%.

Group of orthologs #133. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 C.trachomatis:160

A8ICE4              	100.00%		O84321              	100.00%
Bootstrap support for A8ICE4 as seed ortholog is 99%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #134. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 C.trachomatis:159

A8HQB3              	100.00%		P18584              	100.00%
A8I8X2              	12.17%		
Bootstrap support for A8HQB3 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #135. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 C.trachomatis:159

A8HV47              	100.00%		O84032              	100.00%
Bootstrap support for A8HV47 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #136. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 C.trachomatis:158

A8J503              	100.00%		P0CE01              	100.00%
Bootstrap support for A8J503 as seed ortholog is 100%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #137. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 C.trachomatis:156

A8I9K4              	100.00%		O84685              	100.00%
Bootstrap support for A8I9K4 as seed ortholog is 100%.
Bootstrap support for O84685 as seed ortholog is 100%.

Group of orthologs #138. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 C.trachomatis:155

A8I282              	100.00%		O84463              	100.00%
Bootstrap support for A8I282 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #139. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 C.trachomatis:153

A8JHP9              	100.00%		O84535              	100.00%
A8J074              	8.03%		
Bootstrap support for A8JHP9 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #140. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 C.trachomatis:87

A8IEL3              	100.00%		O84055              	100.00%
Bootstrap support for A8IEL3 as seed ortholog is 100%.
Bootstrap support for O84055 as seed ortholog is 98%.

Group of orthologs #141. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 C.trachomatis:153

P05726              	100.00%		P0CD83              	100.00%
Bootstrap support for P05726 as seed ortholog is 99%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #142. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 C.trachomatis:151

A8JB74              	100.00%		O84096              	100.00%
Bootstrap support for A8JB74 as seed ortholog is 99%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #143. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 C.trachomatis:151

A8JE35              	100.00%		O84533              	100.00%
Bootstrap support for A8JE35 as seed ortholog is 83%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #144. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 C.trachomatis:150

A8JFJ7              	100.00%		O84148              	100.00%
Bootstrap support for A8JFJ7 as seed ortholog is 100%.
Bootstrap support for O84148 as seed ortholog is 100%.

Group of orthologs #145. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 C.trachomatis:148

A8IF80              	100.00%		O84727              	100.00%
Bootstrap support for A8IF80 as seed ortholog is 99%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #146. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 C.trachomatis:146

P11094              	100.00%		P0CD81              	100.00%
Bootstrap support for P11094 as seed ortholog is 99%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #147. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 C.trachomatis:145

A8J6N3              	100.00%		O84188              	100.00%
Bootstrap support for A8J6N3 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #148. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 C.trachomatis:144

A8J463              	100.00%		O84374              	100.00%
Bootstrap support for A8J463 as seed ortholog is 100%.
Bootstrap support for O84374 as seed ortholog is 100%.

Group of orthologs #149. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 C.trachomatis:142

A8IA42              	100.00%		O84752              	100.00%
A8JC21              	40.09%		
A8I9S9              	28.02%		
Bootstrap support for A8IA42 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #150. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 C.trachomatis:142

A8HNP9              	100.00%		O84507              	100.00%
Bootstrap support for A8HNP9 as seed ortholog is 100%.
Bootstrap support for O84507 as seed ortholog is 100%.

Group of orthologs #151. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 C.trachomatis:141

A8ILR9              	100.00%		O84835              	100.00%
A8IKH1              	46.42%		
Bootstrap support for A8ILR9 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #152. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 C.trachomatis:135

A8JAC5              	100.00%		O84468              	100.00%
Bootstrap support for A8JAC5 as seed ortholog is 100%.
Bootstrap support for O84468 as seed ortholog is 100%.

Group of orthologs #153. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 C.trachomatis:134

A8J0X7              	100.00%		O84260              	100.00%
Bootstrap support for A8J0X7 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 100%.

Group of orthologs #154. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 C.trachomatis:131

A8IW91              	100.00%		O84469              	100.00%
Bootstrap support for A8IW91 as seed ortholog is 94%.
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #155. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 C.trachomatis:130

A8IPC9              	100.00%		O84410              	100.00%
Bootstrap support for A8IPC9 as seed ortholog is 100%.
Bootstrap support for O84410 as seed ortholog is 100%.

Group of orthologs #156. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 C.trachomatis:128

A8I0V1              	100.00%		O84367              	100.00%
A8J1S7              	6.03%		
Bootstrap support for A8I0V1 as seed ortholog is 100%.
Bootstrap support for O84367 as seed ortholog is 100%.

Group of orthologs #157. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 C.trachomatis:126

A8HSU4              	100.00%		O84851              	100.00%
Bootstrap support for A8HSU4 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #158. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 C.trachomatis:126

A8I2Y4              	100.00%		O84547              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #159. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 C.trachomatis:126

A8J121              	100.00%		O84650              	100.00%
Bootstrap support for A8J121 as seed ortholog is 60%.
Alternative seed ortholog is A8J281 (11 bits away from this cluster)
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #160. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:23 C.trachomatis:124

A8J0A1              	100.00%		O84033              	100.00%
A8IZB6              	17.80%		
Bootstrap support for A8J0A1 as seed ortholog is 81%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #161. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 C.trachomatis:124

A8J693              	100.00%		O84837              	100.00%
Bootstrap support for A8J693 as seed ortholog is 100%.
Bootstrap support for O84837 as seed ortholog is 100%.

Group of orthologs #162. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 C.trachomatis:124

A8JH48              	100.00%		O84371              	100.00%
Bootstrap support for A8JH48 as seed ortholog is 100%.
Bootstrap support for O84371 as seed ortholog is 100%.

Group of orthologs #163. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 C.trachomatis:121

Q9ATG8              	100.00%		O84492              	100.00%
Bootstrap support for Q9ATG8 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #164. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:8 C.trachomatis:119

Q7YKX3              	100.00%		P0CE03              	100.00%
Bootstrap support for Q7YKX3 as seed ortholog is 59%.
Alternative seed ortholog is A8J2E3 (8 bits away from this cluster)
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #165. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 C.trachomatis:118

A8IX17              	100.00%		O84537              	100.00%
Bootstrap support for A8IX17 as seed ortholog is 100%.
Bootstrap support for O84537 as seed ortholog is 100%.

Group of orthologs #166. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 C.trachomatis:118

P59776              	100.00%		P66480              	100.00%
Bootstrap support for P59776 as seed ortholog is 99%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #167. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 C.trachomatis:116

A8IYT7              	100.00%		O84247              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #168. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 C.trachomatis:116

A8J618              	100.00%		O84271              	100.00%
Bootstrap support for A8J618 as seed ortholog is 100%.
Bootstrap support for O84271 as seed ortholog is 100%.

Group of orthologs #169. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 C.trachomatis:116

A8JHU6              	100.00%		O84633              	100.00%
Bootstrap support for A8JHU6 as seed ortholog is 93%.
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #170. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 C.trachomatis:115

A8HP61              	100.00%		O84241              	100.00%
Bootstrap support for A8HP61 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #171. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 C.trachomatis:115

A8I6M1              	100.00%		O84300              	100.00%
Bootstrap support for A8I6M1 as seed ortholog is 100%.
Bootstrap support for O84300 as seed ortholog is 100%.

Group of orthologs #172. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 C.trachomatis:113

A8ISW5              	100.00%		O84667              	100.00%
Bootstrap support for A8ISW5 as seed ortholog is 100%.
Bootstrap support for O84667 as seed ortholog is 100%.

Group of orthologs #173. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 C.trachomatis:112

A8J375              	100.00%		O84075              	100.00%
Bootstrap support for A8J375 as seed ortholog is 100%.
Bootstrap support for O84075 as seed ortholog is 100%.

Group of orthologs #174. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 C.trachomatis:112

A8JDP6              	100.00%		P0CE04              	100.00%
Bootstrap support for A8JDP6 as seed ortholog is 99%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #175. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 C.trachomatis:111

A8IEU2              	100.00%		O84599              	100.00%
Bootstrap support for A8IEU2 as seed ortholog is 96%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #176. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 C.trachomatis:111

A8J888              	100.00%		O84589              	100.00%
Bootstrap support for A8J888 as seed ortholog is 90%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #177. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 C.trachomatis:110

A8IRQ1              	100.00%		O84215              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #178. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 C.trachomatis:109

A8J9H8              	100.00%		O84508              	100.00%
A8JH12              	53.77%		
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #179. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 C.trachomatis:109

A8HWZ6              	100.00%		O84127              	100.00%
Bootstrap support for A8HWZ6 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #180. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 C.trachomatis:109

A8IA56              	100.00%		O84806              	100.00%
Bootstrap support for A8IA56 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #181. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 C.trachomatis:109

A8JGS3              	100.00%		O84391              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #182. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 C.trachomatis:108

A8HNJ8              	100.00%		P0CD85              	100.00%
Bootstrap support for A8HNJ8 as seed ortholog is 100%.
Bootstrap support for P0CD85 as seed ortholog is 100%.

Group of orthologs #183. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 C.trachomatis:108

P48270              	100.00%		O84631              	100.00%
Bootstrap support for P48270 as seed ortholog is 100%.
Bootstrap support for O84631 as seed ortholog is 100%.

Group of orthologs #184. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 C.trachomatis:107

A8JDN2              	100.00%		O84130              	100.00%
Bootstrap support for A8JDN2 as seed ortholog is 70%.
Alternative seed ortholog is A8JGY3 (18 bits away from this cluster)
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #185. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 C.trachomatis:107

P48267              	100.00%		P0CE06              	100.00%
Bootstrap support for P48267 as seed ortholog is 99%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #186. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 C.trachomatis:105

A8I3I6              	100.00%		O84380              	100.00%
Bootstrap support for A8I3I6 as seed ortholog is 100%.
Bootstrap support for O84380 as seed ortholog is 100%.

Group of orthologs #187. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 C.trachomatis:105

A8IAK4              	100.00%		O84843              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 60%.
Alternative seed ortholog is A8J168 (11 bits away from this cluster)
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #188. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 C.trachomatis:103

A8HTY0              	100.00%		O84318              	100.00%
Bootstrap support for A8HTY0 as seed ortholog is 75%.
Bootstrap support for O84318 as seed ortholog is 100%.

Group of orthologs #189. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 C.trachomatis:103

A8J0V1              	100.00%		O84810              	100.00%
Bootstrap support for A8J0V1 as seed ortholog is 100%.
Bootstrap support for O84810 as seed ortholog is 100%.

Group of orthologs #190. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 C.trachomatis:102

A8J133              	100.00%		O84777              	100.00%
Bootstrap support for A8J133 as seed ortholog is 95%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #191. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 C.trachomatis:102

Q84U22              	100.00%		O84532              	100.00%
Bootstrap support for Q84U22 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #192. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 C.trachomatis:101

A8IBN3              	100.00%		P36431              	100.00%
A8J827              	20.99%		
Bootstrap support for A8IBN3 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #193. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 C.trachomatis:101

A8IZ72              	100.00%		O84375              	100.00%
Bootstrap support for A8IZ72 as seed ortholog is 100%.
Bootstrap support for O84375 as seed ortholog is 100%.

Group of orthologs #194. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 C.trachomatis:100

A8J650              	100.00%		O84331              	100.00%
Bootstrap support for A8J650 as seed ortholog is 100%.
Bootstrap support for O84331 as seed ortholog is 100%.

Group of orthologs #195. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 C.trachomatis:99

A8I7E9              	100.00%		O84728              	100.00%
Bootstrap support for A8I7E9 as seed ortholog is 38%.
Alternative seed ortholog is A8JEI5 (3 bits away from this cluster)
Bootstrap support for O84728 as seed ortholog is 100%.

Group of orthologs #196. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 C.trachomatis:99

A8JEV9              	100.00%		O84867              	100.00%
Bootstrap support for A8JEV9 as seed ortholog is 100%.
Bootstrap support for O84867 as seed ortholog is 100%.

Group of orthologs #197. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 C.trachomatis:97

A8I8Z1              	100.00%		O84737              	100.00%
Bootstrap support for A8I8Z1 as seed ortholog is 100%.
Bootstrap support for O84737 as seed ortholog is 100%.

Group of orthologs #198. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 C.trachomatis:97

P59775              	100.00%		P0CE07              	100.00%
Bootstrap support for P59775 as seed ortholog is 100%.
Bootstrap support for P0CE07 as seed ortholog is 100%.

Group of orthologs #199. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 C.trachomatis:96

A8J599              	100.00%		O84173              	100.00%
Bootstrap support for A8J599 as seed ortholog is 100%.
Bootstrap support for O84173 as seed ortholog is 100%.

Group of orthologs #200. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 C.trachomatis:93

A8I8C3              	100.00%		O84435              	100.00%
Bootstrap support for A8I8C3 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #201. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 C.trachomatis:93

A8ID87              	100.00%		O84545              	100.00%
Bootstrap support for A8ID87 as seed ortholog is 100%.
Bootstrap support for O84545 as seed ortholog is 100%.

Group of orthologs #202. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 C.trachomatis:93

Q9GGE2              	100.00%		O84792              	100.00%
Bootstrap support for Q9GGE2 as seed ortholog is 94%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #203. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 C.trachomatis:92

A8IW44              	100.00%		O84031              	100.00%
Bootstrap support for A8IW44 as seed ortholog is 100%.
Bootstrap support for O84031 as seed ortholog is 100%.

Group of orthologs #204. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 C.trachomatis:92

A8IWQ1              	100.00%		P0CE02              	100.00%
Bootstrap support for A8IWQ1 as seed ortholog is 98%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #205. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 C.trachomatis:91

A8HMG1              	100.00%		O84357              	100.00%
A8HMF6              	55.36%		
Bootstrap support for A8HMG1 as seed ortholog is 100%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #206. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:11 C.trachomatis:90

P26565              	100.00%		O84842              	100.00%
Bootstrap support for P26565 as seed ortholog is 74%.
Alternative seed ortholog is A8HNL1 (11 bits away from this cluster)
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #207. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 C.trachomatis:89

A8IWH7              	100.00%		P18333              	100.00%
Bootstrap support for A8IWH7 as seed ortholog is 100%.
Bootstrap support for P18333 as seed ortholog is 100%.

Group of orthologs #208. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 C.trachomatis:88

A8ISK5              	100.00%		O84294              	100.00%
Bootstrap support for A8ISK5 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #209. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 C.trachomatis:86

A8HMQ7              	100.00%		O84358              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 88%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #210. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 C.trachomatis:86

A8ITM4              	100.00%		O84578              	100.00%
Bootstrap support for A8ITM4 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #211. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 C.trachomatis:86

A8J173              	100.00%		O84368              	100.00%
Bootstrap support for A8J173 as seed ortholog is 100%.
Bootstrap support for O84368 as seed ortholog is 100%.

Group of orthologs #212. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 C.trachomatis:85

A8IR10              	100.00%		O84448              	100.00%
A8I087              	10.73%		
Bootstrap support for A8IR10 as seed ortholog is 100%.
Bootstrap support for O84448 as seed ortholog is 100%.

Group of orthologs #213. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 C.trachomatis:85

A8IGK2              	100.00%		O84686              	100.00%
Bootstrap support for A8IGK2 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #214. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:14 C.trachomatis:85

O20029              	100.00%		O84128              	100.00%
Bootstrap support for O20029 as seed ortholog is 65%.
Alternative seed ortholog is A8HSU7 (14 bits away from this cluster)
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #215. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 C.trachomatis:84

A8JFB1              	100.00%		O84301              	100.00%
A8I2X7              	13.23%		
Bootstrap support for A8JFB1 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #216. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 C.trachomatis:84

A8HQG9              	100.00%		O84779              	100.00%
Bootstrap support for A8HQG9 as seed ortholog is 81%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #217. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 C.trachomatis:84

A8HX04              	100.00%		O84595              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #218. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 C.trachomatis:82

A8HVN9              	100.00%		O84390              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #219. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 C.trachomatis:81

A8I333              	100.00%		O84132              	100.00%
A8J5E7              	37.88%		
Bootstrap support for A8I333 as seed ortholog is 64%.
Alternative seed ortholog is A8IFM3 (10 bits away from this cluster)
Bootstrap support for O84132 as seed ortholog is 100%.

Group of orthologs #220. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 C.trachomatis:81

A8J2W1              	100.00%		O84782              	100.00%
A8ITF6              	13.16%		
Bootstrap support for A8J2W1 as seed ortholog is 72%.
Alternative seed ortholog is A8IW25 (7 bits away from this cluster)
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #221. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 C.trachomatis:81

A8JD51              	100.00%		O84840              	100.00%
Bootstrap support for A8JD51 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #222. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 C.trachomatis:79

A8ISF1              	100.00%		O84695              	100.00%
                    	       		O84205              	13.79%
                    	       		O84204              	13.58%
                    	       		O84696              	13.36%
Bootstrap support for A8ISF1 as seed ortholog is 64%.
Alternative seed ortholog is A8IFM3 (4 bits away from this cluster)
Bootstrap support for O84695 as seed ortholog is 100%.

Group of orthologs #223. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 C.trachomatis:78

A8HP58              	100.00%		O84544              	100.00%
Q84XS2              	8.91%		
Q84XR9              	7.92%		
Bootstrap support for A8HP58 as seed ortholog is 48%.
Alternative seed ortholog is Q84XS0 (1 bits away from this cluster)
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #224. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:20 C.trachomatis:78

Q945T1              	100.00%		P36424              	100.00%
A8IUR2              	10.48%		
Bootstrap support for Q945T1 as seed ortholog is 80%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #225. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 C.trachomatis:77

A8HYD5              	100.00%		O84284              	100.00%
Bootstrap support for A8HYD5 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #226. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 C.trachomatis:77

A8I3W3              	100.00%		O84366              	100.00%
Bootstrap support for A8I3W3 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #227. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 C.trachomatis:77

A8INR7              	100.00%		P66123              	100.00%
Bootstrap support for A8INR7 as seed ortholog is 84%.
Bootstrap support for P66123 as seed ortholog is 100%.

Group of orthologs #228. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 C.trachomatis:75

A8HYL2              	100.00%		O84338              	100.00%
A8J5E0              	25.74%		
A8JCG5              	21.72%		
A8J3U8              	8.06%		
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #229. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 C.trachomatis:74

A8IST3              	100.00%		O84307              	100.00%
A8J1K0              	57.61%		
A8J9X3              	48.79%		
Bootstrap support for A8IST3 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #230. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 C.trachomatis:74

A8IRU3              	100.00%		O84213              	100.00%
A8IT21              	8.76%		
Bootstrap support for A8IRU3 as seed ortholog is 100%.
Bootstrap support for O84213 as seed ortholog is 100%.

Group of orthologs #231. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 C.trachomatis:74

A8HQW1              	100.00%		O84189              	100.00%
Bootstrap support for A8HQW1 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #232. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 C.trachomatis:74

A8J7J5              	100.00%		O84684              	100.00%
Bootstrap support for A8J7J5 as seed ortholog is 68%.
Alternative seed ortholog is A8JHF3 (12 bits away from this cluster)
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #233. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 C.trachomatis:73

A8JGR0              	100.00%		P0CD79              	100.00%
Bootstrap support for A8JGR0 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #234. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 C.trachomatis:73

A8JHB2              	100.00%		O84692              	100.00%
Bootstrap support for A8JHB2 as seed ortholog is 100%.
Bootstrap support for O84692 as seed ortholog is 100%.

Group of orthologs #235. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 C.trachomatis:72

A8HSK8              	100.00%		O84051              	100.00%
Bootstrap support for A8HSK8 as seed ortholog is 100%.
Bootstrap support for O84051 as seed ortholog is 100%.

Group of orthologs #236. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 C.trachomatis:72

A8HVL4              	100.00%		O84557              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 100%.
Bootstrap support for O84557 as seed ortholog is 100%.

Group of orthologs #237. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 C.trachomatis:71

A8IM66              	100.00%		O84154              	100.00%
                    	       		O84660              	7.63%
Bootstrap support for A8IM66 as seed ortholog is 54%.
Alternative seed ortholog is A8ITD0 (4 bits away from this cluster)
Bootstrap support for O84154 as seed ortholog is 100%.

Group of orthologs #238. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 C.trachomatis:71

A8IJL3              	100.00%		O84441              	100.00%
Bootstrap support for A8IJL3 as seed ortholog is 100%.
Bootstrap support for O84441 as seed ortholog is 100%.

Group of orthologs #239. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 C.trachomatis:70

A8IKY2              	100.00%		O84474              	100.00%
Bootstrap support for A8IKY2 as seed ortholog is 100%.
Bootstrap support for O84474 as seed ortholog is 100%.

Group of orthologs #240. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 C.trachomatis:70

A8ISP7              	100.00%		P65106              	100.00%
Bootstrap support for A8ISP7 as seed ortholog is 100%.
Bootstrap support for P65106 as seed ortholog is 100%.

Group of orthologs #241. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 C.trachomatis:70

A8JE84              	100.00%		O84426              	100.00%
Bootstrap support for A8JE84 as seed ortholog is 100%.
Bootstrap support for O84426 as seed ortholog is 100%.

Group of orthologs #242. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 C.trachomatis:68

A8JEL2              	100.00%		O84611              	100.00%
A8HS63              	33.23%		
Bootstrap support for A8JEL2 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #243. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 C.trachomatis:68

A8JGD1              	100.00%		O84778              	100.00%
Q7XXT3              	41.51%		
Bootstrap support for A8JGD1 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #244. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 C.trachomatis:67

A8HQI9              	100.00%		O84781              	100.00%
Bootstrap support for A8HQI9 as seed ortholog is 100%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #245. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 C.trachomatis:67

A8J8B3              	100.00%		O84437              	100.00%
Bootstrap support for A8J8B3 as seed ortholog is 100%.
Bootstrap support for O84437 as seed ortholog is 100%.

Group of orthologs #246. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 C.trachomatis:67

A8JAL6              	100.00%		P0CD82              	100.00%
Bootstrap support for A8JAL6 as seed ortholog is 100%.
Bootstrap support for P0CD82 as seed ortholog is 100%.

Group of orthologs #247. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 C.trachomatis:66

A8JEJ8              	100.00%		O84803              	100.00%
Bootstrap support for A8JEJ8 as seed ortholog is 100%.
Bootstrap support for O84803 as seed ortholog is 100%.

Group of orthologs #248. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 C.trachomatis:65

A8HME4              	100.00%		P0A4C8              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #249. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 C.trachomatis:65

A8HSR3              	100.00%		O84847              	100.00%
Bootstrap support for A8HSR3 as seed ortholog is 100%.
Bootstrap support for O84847 as seed ortholog is 100%.

Group of orthologs #250. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 C.trachomatis:64

A8J352              	100.00%		O84822              	100.00%
Bootstrap support for A8J352 as seed ortholog is 71%.
Alternative seed ortholog is A8IZ78 (15 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #251. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 C.trachomatis:64

A8J9D9              	100.00%		P0CD86              	100.00%
Bootstrap support for A8J9D9 as seed ortholog is 41%.
Alternative seed ortholog is A8IH64 (3 bits away from this cluster)
Bootstrap support for P0CD86 as seed ortholog is 100%.

Group of orthologs #252. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 C.trachomatis:64

A8JH49              	100.00%		P0CD84              	100.00%
Bootstrap support for A8JH49 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #253. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 C.trachomatis:63

A8J746              	100.00%		P26623              	100.00%
A8J740              	33.63%		
A8J741              	32.30%		
A8HUK0              	19.03%		
A8J3L3              	12.39%		
A8JAS8              	12.39%		
Bootstrap support for A8J746 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #254. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 C.trachomatis:63

A8IDN1              	100.00%		P0C0Z8              	100.00%
Bootstrap support for A8IDN1 as seed ortholog is 85%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #255. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 C.trachomatis:63

A8J2T5              	100.00%		O84540              	100.00%
Bootstrap support for A8J2T5 as seed ortholog is 100%.
Bootstrap support for O84540 as seed ortholog is 100%.

Group of orthologs #256. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 C.trachomatis:62

A8JGS2              	100.00%		P0CE05              	100.00%
Bootstrap support for A8JGS2 as seed ortholog is 100%.
Bootstrap support for P0CE05 as seed ortholog is 100%.

Group of orthologs #257. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 C.trachomatis:59

A8HUJ7              	100.00%		O84499              	100.00%
A8IGG2              	9.12%		
Bootstrap support for A8HUJ7 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #258. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 C.trachomatis:59

Q8HUH1              	100.00%		O84687              	100.00%
Bootstrap support for Q8HUH1 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #259. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 C.trachomatis:58

A8HWZ8              	100.00%		P66427              	100.00%
Bootstrap support for A8HWZ8 as seed ortholog is 100%.
Bootstrap support for P66427 as seed ortholog is 100%.

Group of orthologs #260. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 C.trachomatis:58

A8IYS1              	100.00%		O84809              	100.00%
Bootstrap support for A8IYS1 as seed ortholog is 100%.
Bootstrap support for O84809 as seed ortholog is 100%.

Group of orthologs #261. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 C.trachomatis:58

Q6UKY5              	100.00%		O84239              	100.00%
Bootstrap support for Q6UKY5 as seed ortholog is 100%.
Bootstrap support for O84239 as seed ortholog is 100%.

Group of orthologs #262. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 C.trachomatis:57

A8HM37              	100.00%		O84826              	100.00%
A8HYH9              	32.21%		
Bootstrap support for A8HM37 as seed ortholog is 100%.
Bootstrap support for O84826 as seed ortholog is 100%.

Group of orthologs #263. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 C.trachomatis:57

A8IYF1              	100.00%		O84689              	100.00%
Bootstrap support for A8IYF1 as seed ortholog is 47%.
Alternative seed ortholog is A8I9Q3 (4 bits away from this cluster)
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #264. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 C.trachomatis:57

A8J2J9              	100.00%		O84221              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #265. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 C.trachomatis:57

A8J5C0              	100.00%		O84766              	100.00%
Bootstrap support for A8J5C0 as seed ortholog is 100%.
Bootstrap support for O84766 as seed ortholog is 100%.

Group of orthologs #266. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 C.trachomatis:56

A8IP00              	100.00%		O84425              	100.00%
Bootstrap support for A8IP00 as seed ortholog is 100%.
Bootstrap support for O84425 as seed ortholog is 100%.

Group of orthologs #267. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 C.trachomatis:54

A8IEJ9              	100.00%		O84258              	100.00%
A8JIJ6              	48.84%		
A8J0V3              	41.34%		
A8IIC2              	30.70%		
Bootstrap support for A8IEJ9 as seed ortholog is 100%.
Bootstrap support for O84258 as seed ortholog is 100%.

Group of orthologs #268. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 C.trachomatis:54

A8IR23              	100.00%		O84470              	100.00%
A8J8D4              	8.09%		
Bootstrap support for A8IR23 as seed ortholog is 100%.
Bootstrap support for O84470 as seed ortholog is 100%.

Group of orthologs #269. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 C.trachomatis:53

A8I4P5              	100.00%		O84527              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #270. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 C.trachomatis:52

A8HPK7              	100.00%		O84139              	100.00%
Bootstrap support for A8HPK7 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #271. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 C.trachomatis:52

A8J6D0              	100.00%		O84479              	100.00%
Bootstrap support for A8J6D0 as seed ortholog is 100%.
Bootstrap support for O84479 as seed ortholog is 100%.

Group of orthologs #272. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 C.trachomatis:51

A8JDN8              	100.00%		O84029              	100.00%
Bootstrap support for A8JDN8 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #273. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 C.trachomatis:50

A8IME8              	100.00%		O84327              	100.00%
Bootstrap support for A8IME8 as seed ortholog is 100%.
Bootstrap support for O84327 as seed ortholog is 100%.

Group of orthologs #274. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 C.trachomatis:45

A8JF71              	100.00%		O84219              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for O84219 as seed ortholog is 100%.

Group of orthologs #275. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 C.trachomatis:45

A8JHD0              	100.00%		O84353              	100.00%
Bootstrap support for A8JHD0 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #276. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 C.trachomatis:44

A8IW99              	100.00%		O84160              	100.00%
                    	       		O84159              	22.20%
                    	       		O84156              	14.25%
                    	       		O84086              	13.08%
                    	       		O84157              	7.48%
Bootstrap support for A8IW99 as seed ortholog is 100%.
Bootstrap support for O84160 as seed ortholog is 100%.

Group of orthologs #277. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 C.trachomatis:44

A8J290              	100.00%		P64386              	100.00%
Bootstrap support for A8J290 as seed ortholog is 100%.
Bootstrap support for P64386 as seed ortholog is 100%.

Group of orthologs #278. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 C.trachomatis:42

A8J9C3              	100.00%		O84152              	100.00%
A8I1D3              	6.10%		
Bootstrap support for A8J9C3 as seed ortholog is 100%.
Bootstrap support for O84152 as seed ortholog is 100%.

Group of orthologs #279. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 C.trachomatis:42

A8IYB5              	100.00%		O84542              	100.00%
Bootstrap support for A8IYB5 as seed ortholog is 100%.
Bootstrap support for O84542 as seed ortholog is 100%.