###################################
313 groups of orthologs
420 in-paralogs from S.stipitis
346 in-paralogs from T.yellowstonii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 794 bits
Score difference with first non-orthologous sequence - S.stipitis:119 T.yellowstonii:167

A3LN85              	100.00%		B5YI87              	100.00%
Bootstrap support for A3LN85 as seed ortholog is 99%.
Bootstrap support for B5YI87 as seed ortholog is 99%.

Group of orthologs #2. Best score 765 bits
Score difference with first non-orthologous sequence - S.stipitis:765 T.yellowstonii:765

A3M0G6              	100.00%		B5YLE4              	100.00%
Bootstrap support for A3M0G6 as seed ortholog is 100%.
Bootstrap support for B5YLE4 as seed ortholog is 100%.

Group of orthologs #3. Best score 754 bits
Score difference with first non-orthologous sequence - S.stipitis:754 T.yellowstonii:754

A3LP60              	100.00%		B5YJQ7              	100.00%
Bootstrap support for A3LP60 as seed ortholog is 100%.
Bootstrap support for B5YJQ7 as seed ortholog is 100%.

Group of orthologs #4. Best score 721 bits
Score difference with first non-orthologous sequence - S.stipitis:125 T.yellowstonii:671

A3LYI6              	100.00%		B5YH59              	100.00%
Bootstrap support for A3LYI6 as seed ortholog is 99%.
Bootstrap support for B5YH59 as seed ortholog is 100%.

Group of orthologs #5. Best score 644 bits
Score difference with first non-orthologous sequence - S.stipitis:414 T.yellowstonii:644

A3LVX8              	100.00%		B5YKF7              	100.00%
Bootstrap support for A3LVX8 as seed ortholog is 100%.
Bootstrap support for B5YKF7 as seed ortholog is 100%.

Group of orthologs #6. Best score 637 bits
Score difference with first non-orthologous sequence - S.stipitis:565 T.yellowstonii:425

A3LXD8              	100.00%		B5YGV3              	100.00%
A3LW76              	28.97%		
Bootstrap support for A3LXD8 as seed ortholog is 100%.
Bootstrap support for B5YGV3 as seed ortholog is 100%.

Group of orthologs #7. Best score 629 bits
Score difference with first non-orthologous sequence - S.stipitis:481 T.yellowstonii:629

A3LRH3              	100.00%		B5YLA8              	100.00%
Bootstrap support for A3LRH3 as seed ortholog is 100%.
Bootstrap support for B5YLA8 as seed ortholog is 100%.

Group of orthologs #8. Best score 628 bits
Score difference with first non-orthologous sequence - S.stipitis:512 T.yellowstonii:457

A3LST8              	100.00%		B5YI24              	100.00%
Bootstrap support for A3LST8 as seed ortholog is 100%.
Bootstrap support for B5YI24 as seed ortholog is 100%.

Group of orthologs #9. Best score 621 bits
Score difference with first non-orthologous sequence - S.stipitis:519 T.yellowstonii:473

A3GGR8              	100.00%		B5YI22              	100.00%
Bootstrap support for A3GGR8 as seed ortholog is 100%.
Bootstrap support for B5YI22 as seed ortholog is 100%.

Group of orthologs #10. Best score 604 bits
Score difference with first non-orthologous sequence - S.stipitis:604 T.yellowstonii:604

A3LVA0              	100.00%		B5YJD3              	100.00%
Bootstrap support for A3LVA0 as seed ortholog is 100%.
Bootstrap support for B5YJD3 as seed ortholog is 100%.

Group of orthologs #11. Best score 596 bits
Score difference with first non-orthologous sequence - S.stipitis:596 T.yellowstonii:596

A3LQ84              	100.00%		B5YHY9              	100.00%
Bootstrap support for A3LQ84 as seed ortholog is 100%.
Bootstrap support for B5YHY9 as seed ortholog is 100%.

Group of orthologs #12. Best score 556 bits
Score difference with first non-orthologous sequence - S.stipitis:435 T.yellowstonii:556

A3LXU1              	100.00%		B5YJN3              	100.00%
Bootstrap support for A3LXU1 as seed ortholog is 100%.
Bootstrap support for B5YJN3 as seed ortholog is 100%.

Group of orthologs #13. Best score 544 bits
Score difference with first non-orthologous sequence - S.stipitis:96 T.yellowstonii:71

A3M0L3              	100.00%		B5YJK0              	100.00%
Bootstrap support for A3M0L3 as seed ortholog is 90%.
Bootstrap support for B5YJK0 as seed ortholog is 85%.

Group of orthologs #14. Best score 540 bits
Score difference with first non-orthologous sequence - S.stipitis:368 T.yellowstonii:540

A3LW22              	100.00%		B5YHC9              	100.00%
Bootstrap support for A3LW22 as seed ortholog is 100%.
Bootstrap support for B5YHC9 as seed ortholog is 100%.

Group of orthologs #15. Best score 535 bits
Score difference with first non-orthologous sequence - S.stipitis:535 T.yellowstonii:535

A3LRI3              	100.00%		B5YJG4              	100.00%
Bootstrap support for A3LRI3 as seed ortholog is 100%.
Bootstrap support for B5YJG4 as seed ortholog is 100%.

Group of orthologs #16. Best score 532 bits
Score difference with first non-orthologous sequence - S.stipitis:432 T.yellowstonii:269

A3GF06              	100.00%		B5YK47              	100.00%
Bootstrap support for A3GF06 as seed ortholog is 100%.
Bootstrap support for B5YK47 as seed ortholog is 100%.

Group of orthologs #17. Best score 531 bits
Score difference with first non-orthologous sequence - S.stipitis:531 T.yellowstonii:531

A3LX50              	100.00%		B5YFW5              	100.00%
Bootstrap support for A3LX50 as seed ortholog is 100%.
Bootstrap support for B5YFW5 as seed ortholog is 100%.

Group of orthologs #18. Best score 529 bits
Score difference with first non-orthologous sequence - S.stipitis:101 T.yellowstonii:219

A3M072              	100.00%		B5YKD3              	100.00%
Bootstrap support for A3M072 as seed ortholog is 97%.
Bootstrap support for B5YKD3 as seed ortholog is 99%.

Group of orthologs #19. Best score 518 bits
Score difference with first non-orthologous sequence - S.stipitis:398 T.yellowstonii:518

A3LUG6              	100.00%		B5YFP1              	100.00%
Bootstrap support for A3LUG6 as seed ortholog is 100%.
Bootstrap support for B5YFP1 as seed ortholog is 100%.

Group of orthologs #20. Best score 502 bits
Score difference with first non-orthologous sequence - S.stipitis:173 T.yellowstonii:502

A3M0F1              	100.00%		B5YJT1              	100.00%
Bootstrap support for A3M0F1 as seed ortholog is 99%.
Bootstrap support for B5YJT1 as seed ortholog is 100%.

Group of orthologs #21. Best score 497 bits
Score difference with first non-orthologous sequence - S.stipitis:497 T.yellowstonii:497

A3LWW5              	100.00%		B5YJL3              	100.00%
Bootstrap support for A3LWW5 as seed ortholog is 100%.
Bootstrap support for B5YJL3 as seed ortholog is 100%.

Group of orthologs #22. Best score 459 bits
Score difference with first non-orthologous sequence - S.stipitis:35 T.yellowstonii:459

A3LMU7              	100.00%		B5YJQ4              	100.00%
A3LNZ1              	22.13%		
Bootstrap support for A3LMU7 as seed ortholog is 75%.
Bootstrap support for B5YJQ4 as seed ortholog is 100%.

Group of orthologs #23. Best score 457 bits
Score difference with first non-orthologous sequence - S.stipitis:186 T.yellowstonii:457

A3LWK8              	100.00%		B5YLD2              	100.00%
Bootstrap support for A3LWK8 as seed ortholog is 99%.
Bootstrap support for B5YLD2 as seed ortholog is 100%.

Group of orthologs #24. Best score 449 bits
Score difference with first non-orthologous sequence - S.stipitis:449 T.yellowstonii:449

A3LP93              	100.00%		B5YJE1              	100.00%
A3LZQ8              	49.96%		
Bootstrap support for A3LP93 as seed ortholog is 100%.
Bootstrap support for B5YJE1 as seed ortholog is 100%.

Group of orthologs #25. Best score 423 bits
Score difference with first non-orthologous sequence - S.stipitis:282 T.yellowstonii:423

A3LY41              	100.00%		B5YHT8              	100.00%
Bootstrap support for A3LY41 as seed ortholog is 100%.
Bootstrap support for B5YHT8 as seed ortholog is 100%.

Group of orthologs #26. Best score 422 bits
Score difference with first non-orthologous sequence - S.stipitis:422 T.yellowstonii:422

A3LVS2              	100.00%		B5YGT4              	100.00%
Bootstrap support for A3LVS2 as seed ortholog is 100%.
Bootstrap support for B5YGT4 as seed ortholog is 100%.

Group of orthologs #27. Best score 414 bits
Score difference with first non-orthologous sequence - S.stipitis:414 T.yellowstonii:414

A3LNJ6              	100.00%		B5YHE2              	100.00%
Bootstrap support for A3LNJ6 as seed ortholog is 100%.
Bootstrap support for B5YHE2 as seed ortholog is 100%.

Group of orthologs #28. Best score 409 bits
Score difference with first non-orthologous sequence - S.stipitis:159 T.yellowstonii:409

A3GHT9              	100.00%		B5YJI2              	100.00%
Bootstrap support for A3GHT9 as seed ortholog is 99%.
Bootstrap support for B5YJI2 as seed ortholog is 100%.

Group of orthologs #29. Best score 395 bits
Score difference with first non-orthologous sequence - S.stipitis:395 T.yellowstonii:395

A3LUH0              	100.00%		B5YHS5              	100.00%
Bootstrap support for A3LUH0 as seed ortholog is 100%.
Bootstrap support for B5YHS5 as seed ortholog is 100%.

Group of orthologs #30. Best score 391 bits
Score difference with first non-orthologous sequence - S.stipitis:391 T.yellowstonii:391

A3LY71              	100.00%		B5YJI1              	100.00%
Bootstrap support for A3LY71 as seed ortholog is 100%.
Bootstrap support for B5YJI1 as seed ortholog is 100%.

Group of orthologs #31. Best score 390 bits
Score difference with first non-orthologous sequence - S.stipitis:390 T.yellowstonii:390

A3LQP2              	100.00%		B5YKD5              	100.00%
Bootstrap support for A3LQP2 as seed ortholog is 100%.
Bootstrap support for B5YKD5 as seed ortholog is 100%.

Group of orthologs #32. Best score 388 bits
Score difference with first non-orthologous sequence - S.stipitis:388 T.yellowstonii:388

A3LQD6              	100.00%		B5YKR8              	100.00%
Bootstrap support for A3LQD6 as seed ortholog is 100%.
Bootstrap support for B5YKR8 as seed ortholog is 100%.

Group of orthologs #33. Best score 381 bits
Score difference with first non-orthologous sequence - S.stipitis:381 T.yellowstonii:197

A3LY35              	100.00%		B5YKI5              	100.00%
                    	       		B5YL34              	100.00%
Bootstrap support for A3LY35 as seed ortholog is 100%.
Bootstrap support for B5YKI5 as seed ortholog is 100%.
Bootstrap support for B5YL34 as seed ortholog is 99%.

Group of orthologs #34. Best score 377 bits
Score difference with first non-orthologous sequence - S.stipitis:377 T.yellowstonii:377

A3LY87              	100.00%		B5YFZ0              	100.00%
A3LRJ3              	33.73%		
Bootstrap support for A3LY87 as seed ortholog is 100%.
Bootstrap support for B5YFZ0 as seed ortholog is 100%.

Group of orthologs #35. Best score 376 bits
Score difference with first non-orthologous sequence - S.stipitis:108 T.yellowstonii:376

A3LVL5              	100.00%		B5YID6              	100.00%
Bootstrap support for A3LVL5 as seed ortholog is 97%.
Bootstrap support for B5YID6 as seed ortholog is 100%.

Group of orthologs #36. Best score 376 bits
Score difference with first non-orthologous sequence - S.stipitis:376 T.yellowstonii:376

A3LYS9              	100.00%		B5YKK9              	100.00%
Bootstrap support for A3LYS9 as seed ortholog is 100%.
Bootstrap support for B5YKK9 as seed ortholog is 100%.

Group of orthologs #37. Best score 370 bits
Score difference with first non-orthologous sequence - S.stipitis:370 T.yellowstonii:370

A3GH36              	100.00%		B5YKX5              	100.00%
Bootstrap support for A3GH36 as seed ortholog is 100%.
Bootstrap support for B5YKX5 as seed ortholog is 100%.

Group of orthologs #38. Best score 361 bits
Score difference with first non-orthologous sequence - S.stipitis:361 T.yellowstonii:361

A3LZS7              	100.00%		B5YHD3              	100.00%
Bootstrap support for A3LZS7 as seed ortholog is 100%.
Bootstrap support for B5YHD3 as seed ortholog is 100%.

Group of orthologs #39. Best score 357 bits
Score difference with first non-orthologous sequence - S.stipitis:357 T.yellowstonii:357

A3LUY2              	100.00%		B5YI30              	100.00%
Bootstrap support for A3LUY2 as seed ortholog is 100%.
Bootstrap support for B5YI30 as seed ortholog is 100%.

Group of orthologs #40. Best score 347 bits
Score difference with first non-orthologous sequence - S.stipitis:347 T.yellowstonii:347

A3LW02              	100.00%		B5YHZ0              	100.00%
Bootstrap support for A3LW02 as seed ortholog is 100%.
Bootstrap support for B5YHZ0 as seed ortholog is 100%.

Group of orthologs #41. Best score 347 bits
Score difference with first non-orthologous sequence - S.stipitis:347 T.yellowstonii:347

A3LYM8              	100.00%		B5YH38              	100.00%
Bootstrap support for A3LYM8 as seed ortholog is 100%.
Bootstrap support for B5YH38 as seed ortholog is 100%.

Group of orthologs #42. Best score 346 bits
Score difference with first non-orthologous sequence - S.stipitis:209 T.yellowstonii:243

A3M0I8              	100.00%		B5YJD5              	100.00%
Bootstrap support for A3M0I8 as seed ortholog is 99%.
Bootstrap support for B5YJD5 as seed ortholog is 100%.

Group of orthologs #43. Best score 343 bits
Score difference with first non-orthologous sequence - S.stipitis:88 T.yellowstonii:194

A3LYW7              	100.00%		B5YL41              	100.00%
A3LY20              	38.70%		
Bootstrap support for A3LYW7 as seed ortholog is 93%.
Bootstrap support for B5YL41 as seed ortholog is 99%.

Group of orthologs #44. Best score 334 bits
Score difference with first non-orthologous sequence - S.stipitis:106 T.yellowstonii:334

A3GEX5              	100.00%		B5YLD6              	100.00%
Bootstrap support for A3GEX5 as seed ortholog is 99%.
Bootstrap support for B5YLD6 as seed ortholog is 100%.

Group of orthologs #45. Best score 320 bits
Score difference with first non-orthologous sequence - S.stipitis:320 T.yellowstonii:320

A3M058              	100.00%		B5YH23              	100.00%
A3GEV9              	67.34%		
Bootstrap support for A3M058 as seed ortholog is 100%.
Bootstrap support for B5YH23 as seed ortholog is 100%.

Group of orthologs #46. Best score 319 bits
Score difference with first non-orthologous sequence - S.stipitis:319 T.yellowstonii:319

A3GFG5              	100.00%		B5YFV8              	100.00%
A3LP81              	17.39%		
Bootstrap support for A3GFG5 as seed ortholog is 100%.
Bootstrap support for B5YFV8 as seed ortholog is 100%.

Group of orthologs #47. Best score 314 bits
Score difference with first non-orthologous sequence - S.stipitis:314 T.yellowstonii:314

A3LNU0              	100.00%		B5YHE1              	100.00%
Bootstrap support for A3LNU0 as seed ortholog is 100%.
Bootstrap support for B5YHE1 as seed ortholog is 100%.

Group of orthologs #48. Best score 312 bits
Score difference with first non-orthologous sequence - S.stipitis:312 T.yellowstonii:159

A3LQ70              	100.00%		B5YI31              	100.00%
A3LZZ7              	70.77%		
A3LNP7              	67.34%		
Bootstrap support for A3LQ70 as seed ortholog is 100%.
Bootstrap support for B5YI31 as seed ortholog is 99%.

Group of orthologs #49. Best score 307 bits
Score difference with first non-orthologous sequence - S.stipitis:6 T.yellowstonii:307

A3GHU7              	100.00%		B5YJY3              	100.00%
Bootstrap support for A3GHU7 as seed ortholog is 53%.
Alternative seed ortholog is A3LU10 (6 bits away from this cluster)
Bootstrap support for B5YJY3 as seed ortholog is 100%.

Group of orthologs #50. Best score 304 bits
Score difference with first non-orthologous sequence - S.stipitis:257 T.yellowstonii:304

A3LXJ6              	100.00%		B5YGD2              	100.00%
Bootstrap support for A3LXJ6 as seed ortholog is 100%.
Bootstrap support for B5YGD2 as seed ortholog is 100%.

Group of orthologs #51. Best score 303 bits
Score difference with first non-orthologous sequence - S.stipitis:70 T.yellowstonii:210

A3GF49              	100.00%		B5YJU8              	100.00%
Bootstrap support for A3GF49 as seed ortholog is 95%.
Bootstrap support for B5YJU8 as seed ortholog is 100%.

Group of orthologs #52. Best score 302 bits
Score difference with first non-orthologous sequence - S.stipitis:302 T.yellowstonii:302

A3M096              	100.00%		B5YLE5              	100.00%
Bootstrap support for A3M096 as seed ortholog is 100%.
Bootstrap support for B5YLE5 as seed ortholog is 100%.

Group of orthologs #53. Best score 298 bits
Score difference with first non-orthologous sequence - S.stipitis:160 T.yellowstonii:298

A3LXG1              	100.00%		B5YJP5              	100.00%
Bootstrap support for A3LXG1 as seed ortholog is 99%.
Bootstrap support for B5YJP5 as seed ortholog is 100%.

Group of orthologs #54. Best score 297 bits
Score difference with first non-orthologous sequence - S.stipitis:167 T.yellowstonii:297

A3LNS6              	100.00%		B5YJ14              	100.00%
Bootstrap support for A3LNS6 as seed ortholog is 99%.
Bootstrap support for B5YJ14 as seed ortholog is 100%.

Group of orthologs #55. Best score 296 bits
Score difference with first non-orthologous sequence - S.stipitis:296 T.yellowstonii:296

A3M0K6              	100.00%		B5YFS4              	100.00%
Bootstrap support for A3M0K6 as seed ortholog is 100%.
Bootstrap support for B5YFS4 as seed ortholog is 100%.

Group of orthologs #56. Best score 292 bits
Score difference with first non-orthologous sequence - S.stipitis:97 T.yellowstonii:292

A3LSR0              	100.00%		B5YH08              	100.00%
A3LUG7              	12.40%		
Bootstrap support for A3LSR0 as seed ortholog is 99%.
Bootstrap support for B5YH08 as seed ortholog is 100%.

Group of orthologs #57. Best score 287 bits
Score difference with first non-orthologous sequence - S.stipitis:287 T.yellowstonii:287

A3LZI8              	100.00%		B5YK66              	100.00%
Bootstrap support for A3LZI8 as seed ortholog is 100%.
Bootstrap support for B5YK66 as seed ortholog is 100%.

Group of orthologs #58. Best score 284 bits
Score difference with first non-orthologous sequence - S.stipitis:67 T.yellowstonii:284

A3GG91              	100.00%		B5YG56              	100.00%
A3LTI2              	41.48%		
Bootstrap support for A3GG91 as seed ortholog is 98%.
Bootstrap support for B5YG56 as seed ortholog is 100%.

Group of orthologs #59. Best score 276 bits
Score difference with first non-orthologous sequence - S.stipitis:56 T.yellowstonii:119

A3LNB3              	100.00%		B5YFP4              	100.00%
Bootstrap support for A3LNB3 as seed ortholog is 91%.
Bootstrap support for B5YFP4 as seed ortholog is 99%.

Group of orthologs #60. Best score 276 bits
Score difference with first non-orthologous sequence - S.stipitis:276 T.yellowstonii:276

A3LUJ3              	100.00%		B5YJV6              	100.00%
Bootstrap support for A3LUJ3 as seed ortholog is 100%.
Bootstrap support for B5YJV6 as seed ortholog is 100%.

Group of orthologs #61. Best score 274 bits
Score difference with first non-orthologous sequence - S.stipitis:46 T.yellowstonii:274

A3LR17              	100.00%		B5YJ07              	100.00%
A3LRF7              	12.13%		
Bootstrap support for A3LR17 as seed ortholog is 88%.
Bootstrap support for B5YJ07 as seed ortholog is 100%.

Group of orthologs #62. Best score 272 bits
Score difference with first non-orthologous sequence - S.stipitis:272 T.yellowstonii:272

A3GID7              	100.00%		B5YFV7              	100.00%
A3GEY3              	15.46%		
A3LYS3              	7.74%		
Bootstrap support for A3GID7 as seed ortholog is 100%.
Bootstrap support for B5YFV7 as seed ortholog is 100%.

Group of orthologs #63. Best score 266 bits
Score difference with first non-orthologous sequence - S.stipitis:266 T.yellowstonii:266

A3GFV6              	100.00%		B5YL60              	100.00%
Bootstrap support for A3GFV6 as seed ortholog is 100%.
Bootstrap support for B5YL60 as seed ortholog is 100%.

Group of orthologs #64. Best score 264 bits
Score difference with first non-orthologous sequence - S.stipitis:84 T.yellowstonii:171

A3GF39              	100.00%		B5YH32              	100.00%
Bootstrap support for A3GF39 as seed ortholog is 97%.
Bootstrap support for B5YH32 as seed ortholog is 99%.

Group of orthologs #65. Best score 262 bits
Score difference with first non-orthologous sequence - S.stipitis:158 T.yellowstonii:65

A3LZR3              	100.00%		B5YHS6              	100.00%
Bootstrap support for A3LZR3 as seed ortholog is 99%.
Bootstrap support for B5YHS6 as seed ortholog is 89%.

Group of orthologs #66. Best score 261 bits
Score difference with first non-orthologous sequence - S.stipitis:261 T.yellowstonii:261

A3LQV1              	100.00%		B5YIG1              	100.00%
Bootstrap support for A3LQV1 as seed ortholog is 100%.
Bootstrap support for B5YIG1 as seed ortholog is 100%.

Group of orthologs #67. Best score 260 bits
Score difference with first non-orthologous sequence - S.stipitis:87 T.yellowstonii:260

A3LNS1              	100.00%		B5YL59              	100.00%
Bootstrap support for A3LNS1 as seed ortholog is 93%.
Bootstrap support for B5YL59 as seed ortholog is 100%.

Group of orthologs #68. Best score 260 bits
Score difference with first non-orthologous sequence - S.stipitis:260 T.yellowstonii:260

A3LWC0              	100.00%		B5YGC2              	100.00%
Bootstrap support for A3LWC0 as seed ortholog is 100%.
Bootstrap support for B5YGC2 as seed ortholog is 100%.

Group of orthologs #69. Best score 260 bits
Score difference with first non-orthologous sequence - S.stipitis:260 T.yellowstonii:260

A3LZN7              	100.00%		B5YFN3              	100.00%
Bootstrap support for A3LZN7 as seed ortholog is 100%.
Bootstrap support for B5YFN3 as seed ortholog is 100%.

Group of orthologs #70. Best score 257 bits
Score difference with first non-orthologous sequence - S.stipitis:27 T.yellowstonii:257

A3LUE7              	100.00%		B5YGU2              	100.00%
Bootstrap support for A3LUE7 as seed ortholog is 72%.
Alternative seed ortholog is A3LUT6 (27 bits away from this cluster)
Bootstrap support for B5YGU2 as seed ortholog is 100%.

Group of orthologs #71. Best score 257 bits
Score difference with first non-orthologous sequence - S.stipitis:94 T.yellowstonii:257

A3LYY5              	100.00%		B5YKS0              	100.00%
Bootstrap support for A3LYY5 as seed ortholog is 95%.
Bootstrap support for B5YKS0 as seed ortholog is 100%.

Group of orthologs #72. Best score 250 bits
Score difference with first non-orthologous sequence - S.stipitis:250 T.yellowstonii:94

A3LTN5              	100.00%		B5YIQ7              	100.00%
Bootstrap support for A3LTN5 as seed ortholog is 100%.
Bootstrap support for B5YIQ7 as seed ortholog is 99%.

Group of orthologs #73. Best score 249 bits
Score difference with first non-orthologous sequence - S.stipitis:249 T.yellowstonii:249

A3LP86              	100.00%		B5YJ65              	100.00%
Bootstrap support for A3LP86 as seed ortholog is 100%.
Bootstrap support for B5YJ65 as seed ortholog is 100%.

Group of orthologs #74. Best score 245 bits
Score difference with first non-orthologous sequence - S.stipitis:21 T.yellowstonii:245

A3GF66              	100.00%		B5YHR4              	100.00%
Bootstrap support for A3GF66 as seed ortholog is 73%.
Alternative seed ortholog is A3LU28 (21 bits away from this cluster)
Bootstrap support for B5YHR4 as seed ortholog is 100%.

Group of orthologs #75. Best score 239 bits
Score difference with first non-orthologous sequence - S.stipitis:239 T.yellowstonii:239

A3GGJ5              	100.00%		B5YIE1              	100.00%
Bootstrap support for A3GGJ5 as seed ortholog is 100%.
Bootstrap support for B5YIE1 as seed ortholog is 100%.

Group of orthologs #76. Best score 235 bits
Score difference with first non-orthologous sequence - S.stipitis:235 T.yellowstonii:235

A3LN97              	100.00%		B5YJW7              	100.00%
Bootstrap support for A3LN97 as seed ortholog is 100%.
Bootstrap support for B5YJW7 as seed ortholog is 100%.

Group of orthologs #77. Best score 234 bits
Score difference with first non-orthologous sequence - S.stipitis:234 T.yellowstonii:234

A3GIC7              	100.00%		B5YJ64              	100.00%
Bootstrap support for A3GIC7 as seed ortholog is 100%.
Bootstrap support for B5YJ64 as seed ortholog is 100%.

Group of orthologs #78. Best score 232 bits
Score difference with first non-orthologous sequence - S.stipitis:232 T.yellowstonii:232

A3GGA8              	100.00%		B5YLE2              	100.00%
Bootstrap support for A3GGA8 as seed ortholog is 100%.
Bootstrap support for B5YLE2 as seed ortholog is 100%.

Group of orthologs #79. Best score 231 bits
Score difference with first non-orthologous sequence - S.stipitis:231 T.yellowstonii:231

A3LWX2              	100.00%		B5YLA0              	100.00%
Bootstrap support for A3LWX2 as seed ortholog is 100%.
Bootstrap support for B5YLA0 as seed ortholog is 100%.

Group of orthologs #80. Best score 228 bits
Score difference with first non-orthologous sequence - S.stipitis:228 T.yellowstonii:228

A3LP83              	100.00%		B5YHG0              	100.00%
A3LNA5              	100.00%		B5YGJ2              	100.00%
Bootstrap support for A3LP83 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 100%.
Bootstrap support for B5YHG0 as seed ortholog is 100%.
Bootstrap support for B5YGJ2 as seed ortholog is 100%.

Group of orthologs #81. Best score 228 bits
Score difference with first non-orthologous sequence - S.stipitis:133 T.yellowstonii:97

A3LXN7              	100.00%		B5YI83              	100.00%
Bootstrap support for A3LXN7 as seed ortholog is 99%.
Bootstrap support for B5YI83 as seed ortholog is 99%.

Group of orthologs #82. Best score 224 bits
Score difference with first non-orthologous sequence - S.stipitis:53 T.yellowstonii:224

A3GI83              	100.00%		B5YJU5              	100.00%
A3GEX0              	24.95%		B5YIF0              	18.42%
A3LTY9              	24.42%		
Bootstrap support for A3GI83 as seed ortholog is 88%.
Bootstrap support for B5YJU5 as seed ortholog is 100%.

Group of orthologs #83. Best score 224 bits
Score difference with first non-orthologous sequence - S.stipitis:224 T.yellowstonii:224

A3LQK9              	100.00%		B5YHM1              	100.00%
Bootstrap support for A3LQK9 as seed ortholog is 100%.
Bootstrap support for B5YHM1 as seed ortholog is 100%.

Group of orthologs #84. Best score 221 bits
Score difference with first non-orthologous sequence - S.stipitis:221 T.yellowstonii:221

A3LW87              	100.00%		B5YK82              	100.00%
Bootstrap support for A3LW87 as seed ortholog is 100%.
Bootstrap support for B5YK82 as seed ortholog is 100%.

Group of orthologs #85. Best score 218 bits
Score difference with first non-orthologous sequence - S.stipitis:51 T.yellowstonii:218

A3LTV2              	100.00%		B5YIZ6              	100.00%
Bootstrap support for A3LTV2 as seed ortholog is 82%.
Bootstrap support for B5YIZ6 as seed ortholog is 100%.

Group of orthologs #86. Best score 218 bits
Score difference with first non-orthologous sequence - S.stipitis:116 T.yellowstonii:218

A3M0H9              	100.00%		B5YKW0              	100.00%
Bootstrap support for A3M0H9 as seed ortholog is 99%.
Bootstrap support for B5YKW0 as seed ortholog is 100%.

Group of orthologs #87. Best score 216 bits
Score difference with first non-orthologous sequence - S.stipitis:216 T.yellowstonii:216

A3LMT2              	100.00%		B5YLC5              	100.00%
Bootstrap support for A3LMT2 as seed ortholog is 100%.
Bootstrap support for B5YLC5 as seed ortholog is 100%.

Group of orthologs #88. Best score 213 bits
Score difference with first non-orthologous sequence - S.stipitis:213 T.yellowstonii:213

A3GFD5              	100.00%		B5YIG6              	100.00%
Bootstrap support for A3GFD5 as seed ortholog is 100%.
Bootstrap support for B5YIG6 as seed ortholog is 100%.

Group of orthologs #89. Best score 212 bits
Score difference with first non-orthologous sequence - S.stipitis:56 T.yellowstonii:212

A3M0D4              	100.00%		B5YIF1              	100.00%
Bootstrap support for A3M0D4 as seed ortholog is 54%.
Alternative seed ortholog is A3LUE4 (56 bits away from this cluster)
Bootstrap support for B5YIF1 as seed ortholog is 100%.

Group of orthologs #90. Best score 209 bits
Score difference with first non-orthologous sequence - S.stipitis:209 T.yellowstonii:209

A3LW77              	100.00%		B5YJZ4              	100.00%
Bootstrap support for A3LW77 as seed ortholog is 100%.
Bootstrap support for B5YJZ4 as seed ortholog is 100%.

Group of orthologs #91. Best score 208 bits
Score difference with first non-orthologous sequence - S.stipitis:208 T.yellowstonii:208

A3GHT7              	100.00%		B5YID4              	100.00%
Bootstrap support for A3GHT7 as seed ortholog is 100%.
Bootstrap support for B5YID4 as seed ortholog is 100%.

Group of orthologs #92. Best score 208 bits
Score difference with first non-orthologous sequence - S.stipitis:77 T.yellowstonii:208

A3LRC4              	100.00%		B5YKN6              	100.00%
Bootstrap support for A3LRC4 as seed ortholog is 98%.
Bootstrap support for B5YKN6 as seed ortholog is 100%.

Group of orthologs #93. Best score 207 bits
Score difference with first non-orthologous sequence - S.stipitis:113 T.yellowstonii:207

A3LNH9              	100.00%		B5YG44              	100.00%
Bootstrap support for A3LNH9 as seed ortholog is 99%.
Bootstrap support for B5YG44 as seed ortholog is 100%.

Group of orthologs #94. Best score 206 bits
Score difference with first non-orthologous sequence - S.stipitis:206 T.yellowstonii:206

A3LWQ1              	100.00%		B5YJM2              	100.00%
Bootstrap support for A3LWQ1 as seed ortholog is 100%.
Bootstrap support for B5YJM2 as seed ortholog is 100%.

Group of orthologs #95. Best score 203 bits
Score difference with first non-orthologous sequence - S.stipitis:203 T.yellowstonii:203

A3LQZ2              	100.00%		B5YJ91              	100.00%
Bootstrap support for A3LQZ2 as seed ortholog is 100%.
Bootstrap support for B5YJ91 as seed ortholog is 100%.

Group of orthologs #96. Best score 200 bits
Score difference with first non-orthologous sequence - S.stipitis:81 T.yellowstonii:200

A3LPQ2              	100.00%		B5YKK8              	100.00%
Bootstrap support for A3LPQ2 as seed ortholog is 98%.
Bootstrap support for B5YKK8 as seed ortholog is 100%.

Group of orthologs #97. Best score 195 bits
Score difference with first non-orthologous sequence - S.stipitis:108 T.yellowstonii:195

A3LN21              	100.00%		B5YGA0              	100.00%
Bootstrap support for A3LN21 as seed ortholog is 99%.
Bootstrap support for B5YGA0 as seed ortholog is 100%.

Group of orthologs #98. Best score 193 bits
Score difference with first non-orthologous sequence - S.stipitis:193 T.yellowstonii:75

A3GHN5              	100.00%		B5YL35              	100.00%
                    	       		B5YKI3              	37.80%
Bootstrap support for A3GHN5 as seed ortholog is 100%.
Bootstrap support for B5YL35 as seed ortholog is 99%.

Group of orthologs #99. Best score 191 bits
Score difference with first non-orthologous sequence - S.stipitis:191 T.yellowstonii:191

A3LXS9              	100.00%		B5YFV1              	100.00%
Bootstrap support for A3LXS9 as seed ortholog is 100%.
Bootstrap support for B5YFV1 as seed ortholog is 100%.

Group of orthologs #100. Best score 190 bits
Score difference with first non-orthologous sequence - S.stipitis:190 T.yellowstonii:190

A3LYU1              	100.00%		B5YFV5              	100.00%
Bootstrap support for A3LYU1 as seed ortholog is 100%.
Bootstrap support for B5YFV5 as seed ortholog is 100%.

Group of orthologs #101. Best score 188 bits
Score difference with first non-orthologous sequence - S.stipitis:188 T.yellowstonii:129

A3LTD1              	100.00%		B5YJU7              	100.00%
Bootstrap support for A3LTD1 as seed ortholog is 100%.
Bootstrap support for B5YJU7 as seed ortholog is 99%.

Group of orthologs #102. Best score 188 bits
Score difference with first non-orthologous sequence - S.stipitis:188 T.yellowstonii:188

A3M027              	100.00%		B5YK48              	100.00%
Bootstrap support for A3M027 as seed ortholog is 100%.
Bootstrap support for B5YK48 as seed ortholog is 100%.

Group of orthologs #103. Best score 184 bits
Score difference with first non-orthologous sequence - S.stipitis:184 T.yellowstonii:184

A3GEY1              	100.00%		B5YJD7              	100.00%
Bootstrap support for A3GEY1 as seed ortholog is 100%.
Bootstrap support for B5YJD7 as seed ortholog is 100%.

Group of orthologs #104. Best score 181 bits
Score difference with first non-orthologous sequence - S.stipitis:6 T.yellowstonii:181

A3LVB6              	100.00%		B5YH58              	100.00%
Bootstrap support for A3LVB6 as seed ortholog is 55%.
Alternative seed ortholog is A3M086 (6 bits away from this cluster)
Bootstrap support for B5YH58 as seed ortholog is 100%.

Group of orthologs #105. Best score 180 bits
Score difference with first non-orthologous sequence - S.stipitis:180 T.yellowstonii:180

A3GHZ1              	100.00%		B5YKY3              	100.00%
Bootstrap support for A3GHZ1 as seed ortholog is 100%.
Bootstrap support for B5YKY3 as seed ortholog is 100%.

Group of orthologs #106. Best score 180 bits
Score difference with first non-orthologous sequence - S.stipitis:20 T.yellowstonii:180

A3LV51              	100.00%		B5YHP1              	100.00%
Bootstrap support for A3LV51 as seed ortholog is 77%.
Bootstrap support for B5YHP1 as seed ortholog is 100%.

Group of orthologs #107. Best score 179 bits
Score difference with first non-orthologous sequence - S.stipitis:60 T.yellowstonii:179

A3LV77              	100.00%		B5YFU5              	100.00%
Bootstrap support for A3LV77 as seed ortholog is 95%.
Bootstrap support for B5YFU5 as seed ortholog is 100%.

Group of orthologs #108. Best score 178 bits
Score difference with first non-orthologous sequence - S.stipitis:178 T.yellowstonii:178

A3LZE9              	100.00%		B5YJA6              	100.00%
Bootstrap support for A3LZE9 as seed ortholog is 100%.
Bootstrap support for B5YJA6 as seed ortholog is 100%.

Group of orthologs #109. Best score 176 bits
Score difference with first non-orthologous sequence - S.stipitis:176 T.yellowstonii:176

A3LNS0              	100.00%		B5YJV0              	100.00%
Bootstrap support for A3LNS0 as seed ortholog is 100%.
Bootstrap support for B5YJV0 as seed ortholog is 100%.

Group of orthologs #110. Best score 171 bits
Score difference with first non-orthologous sequence - S.stipitis:171 T.yellowstonii:171

A3LQS2              	100.00%		B5YHB1              	100.00%
Bootstrap support for A3LQS2 as seed ortholog is 100%.
Bootstrap support for B5YHB1 as seed ortholog is 100%.

Group of orthologs #111. Best score 168 bits
Score difference with first non-orthologous sequence - S.stipitis:27 T.yellowstonii:66

A3LUA5              	100.00%		B5YJS7              	100.00%
A3GGR1              	80.42%		
Bootstrap support for A3LUA5 as seed ortholog is 71%.
Alternative seed ortholog is A3GFB4 (27 bits away from this cluster)
Bootstrap support for B5YJS7 as seed ortholog is 97%.

Group of orthologs #112. Best score 168 bits
Score difference with first non-orthologous sequence - S.stipitis:104 T.yellowstonii:168

A3GEY7              	100.00%		B5YG27              	100.00%
Bootstrap support for A3GEY7 as seed ortholog is 99%.
Bootstrap support for B5YG27 as seed ortholog is 100%.

Group of orthologs #113. Best score 168 bits
Score difference with first non-orthologous sequence - S.stipitis:168 T.yellowstonii:168

A3LS81              	100.00%		B5YK85              	100.00%
Bootstrap support for A3LS81 as seed ortholog is 100%.
Bootstrap support for B5YK85 as seed ortholog is 100%.

Group of orthologs #114. Best score 168 bits
Score difference with first non-orthologous sequence - S.stipitis:168 T.yellowstonii:168

A3LYZ8              	100.00%		B5YJQ2              	100.00%
Bootstrap support for A3LYZ8 as seed ortholog is 100%.
Bootstrap support for B5YJQ2 as seed ortholog is 100%.

Group of orthologs #115. Best score 166 bits
Score difference with first non-orthologous sequence - S.stipitis:166 T.yellowstonii:166

A3LVM5              	100.00%		B5YH36              	100.00%
Bootstrap support for A3LVM5 as seed ortholog is 100%.
Bootstrap support for B5YH36 as seed ortholog is 100%.

Group of orthologs #116. Best score 165 bits
Score difference with first non-orthologous sequence - S.stipitis:59 T.yellowstonii:165

A3LWH9              	100.00%		B5YJI6              	100.00%
Bootstrap support for A3LWH9 as seed ortholog is 89%.
Bootstrap support for B5YJI6 as seed ortholog is 100%.

Group of orthologs #117. Best score 164 bits
Score difference with first non-orthologous sequence - S.stipitis:39 T.yellowstonii:164

A3LRT1              	100.00%		B5YL58              	100.00%
A3LSP1              	46.66%		
Bootstrap support for A3LRT1 as seed ortholog is 82%.
Bootstrap support for B5YL58 as seed ortholog is 100%.

Group of orthologs #118. Best score 163 bits
Score difference with first non-orthologous sequence - S.stipitis:78 T.yellowstonii:70

A3GH30              	100.00%		B5YG99              	100.00%
Bootstrap support for A3GH30 as seed ortholog is 97%.
Bootstrap support for B5YG99 as seed ortholog is 94%.

Group of orthologs #119. Best score 161 bits
Score difference with first non-orthologous sequence - S.stipitis:161 T.yellowstonii:161

A3LXY7              	100.00%		B5YJI3              	100.00%
Bootstrap support for A3LXY7 as seed ortholog is 100%.
Bootstrap support for B5YJI3 as seed ortholog is 100%.

Group of orthologs #120. Best score 159 bits
Score difference with first non-orthologous sequence - S.stipitis:34 T.yellowstonii:159

A3LRQ3              	100.00%		B5YFM2              	100.00%
A3LWY8              	31.85%		
A3LWY9              	31.66%		
A3LZ62              	31.46%		
A3LZ63              	29.88%		
A3LWL3              	26.82%		
A3GGI3              	26.73%		
A3LWM0              	10.45%		
A3GH02              	5.23%		
Bootstrap support for A3LRQ3 as seed ortholog is 78%.
Bootstrap support for B5YFM2 as seed ortholog is 100%.

Group of orthologs #121. Best score 159 bits
Score difference with first non-orthologous sequence - S.stipitis:159 T.yellowstonii:159

A3LW19              	100.00%		B5YFS5              	100.00%
Bootstrap support for A3LW19 as seed ortholog is 100%.
Bootstrap support for B5YFS5 as seed ortholog is 100%.

Group of orthologs #122. Best score 159 bits
Score difference with first non-orthologous sequence - S.stipitis:159 T.yellowstonii:159

A3M0L9              	100.00%		B5YIL2              	100.00%
Bootstrap support for A3M0L9 as seed ortholog is 100%.
Bootstrap support for B5YIL2 as seed ortholog is 100%.

Group of orthologs #123. Best score 157 bits
Score difference with first non-orthologous sequence - S.stipitis:157 T.yellowstonii:157

A3LZW3              	100.00%		B5YH64              	100.00%
Bootstrap support for A3LZW3 as seed ortholog is 100%.
Bootstrap support for B5YH64 as seed ortholog is 100%.

Group of orthologs #124. Best score 156 bits
Score difference with first non-orthologous sequence - S.stipitis:156 T.yellowstonii:156

A3LSB3              	100.00%		B5YIB7              	100.00%
Bootstrap support for A3LSB3 as seed ortholog is 100%.
Bootstrap support for B5YIB7 as seed ortholog is 100%.

Group of orthologs #125. Best score 156 bits
Score difference with first non-orthologous sequence - S.stipitis:102 T.yellowstonii:156

A3LVL9              	100.00%		B5YH48              	100.00%
Bootstrap support for A3LVL9 as seed ortholog is 99%.
Bootstrap support for B5YH48 as seed ortholog is 100%.

Group of orthologs #126. Best score 155 bits
Score difference with first non-orthologous sequence - S.stipitis:49 T.yellowstonii:40

A3LR65              	100.00%		B5YFN8              	100.00%
Bootstrap support for A3LR65 as seed ortholog is 88%.
Bootstrap support for B5YFN8 as seed ortholog is 85%.

Group of orthologs #127. Best score 155 bits
Score difference with first non-orthologous sequence - S.stipitis:155 T.yellowstonii:155

A3LRL1              	100.00%		B5YKK7              	100.00%
Bootstrap support for A3LRL1 as seed ortholog is 100%.
Bootstrap support for B5YKK7 as seed ortholog is 100%.

Group of orthologs #128. Best score 154 bits
Score difference with first non-orthologous sequence - S.stipitis:154 T.yellowstonii:154

A3LRY4              	100.00%		B5YH83              	100.00%
A3LRY5              	40.36%		
Bootstrap support for A3LRY4 as seed ortholog is 100%.
Bootstrap support for B5YH83 as seed ortholog is 100%.

Group of orthologs #129. Best score 154 bits
Score difference with first non-orthologous sequence - S.stipitis:54 T.yellowstonii:154

A3LVP9              	100.00%		B5YJJ0              	100.00%
Bootstrap support for A3LVP9 as seed ortholog is 91%.
Bootstrap support for B5YJJ0 as seed ortholog is 100%.

Group of orthologs #130. Best score 153 bits
Score difference with first non-orthologous sequence - S.stipitis:153 T.yellowstonii:153

A3LQF9              	100.00%		B5YH35              	100.00%
                    	       		B5YIE5              	14.98%
Bootstrap support for A3LQF9 as seed ortholog is 100%.
Bootstrap support for B5YH35 as seed ortholog is 100%.

Group of orthologs #131. Best score 152 bits
Score difference with first non-orthologous sequence - S.stipitis:152 T.yellowstonii:152

A3LZL0              	100.00%		B5YL53              	100.00%
Bootstrap support for A3LZL0 as seed ortholog is 100%.
Bootstrap support for B5YL53 as seed ortholog is 100%.

Group of orthologs #132. Best score 151 bits
Score difference with first non-orthologous sequence - S.stipitis:151 T.yellowstonii:151

A3LWN0              	100.00%		B5YGI2              	100.00%
Bootstrap support for A3LWN0 as seed ortholog is 100%.
Bootstrap support for B5YGI2 as seed ortholog is 100%.

Group of orthologs #133. Best score 150 bits
Score difference with first non-orthologous sequence - S.stipitis:150 T.yellowstonii:150

A3LUW4              	100.00%		B5YJT0              	100.00%
Bootstrap support for A3LUW4 as seed ortholog is 100%.
Bootstrap support for B5YJT0 as seed ortholog is 100%.

Group of orthologs #134. Best score 149 bits
Score difference with first non-orthologous sequence - S.stipitis:62 T.yellowstonii:149

A3LP57              	100.00%		B5YJR8              	100.00%
A3LYG2              	12.70%		
A3LQ23              	11.23%		
A3LZW6              	10.47%		
A3GFQ5              	9.71%		
A3LZZ3              	9.21%		
A3LSI2              	6.98%		
Bootstrap support for A3LP57 as seed ortholog is 70%.
Alternative seed ortholog is A3LW89 (62 bits away from this cluster)
Bootstrap support for B5YJR8 as seed ortholog is 100%.

Group of orthologs #135. Best score 149 bits
Score difference with first non-orthologous sequence - S.stipitis:149 T.yellowstonii:149

A3LYF6              	100.00%		B5YKP7              	100.00%
Bootstrap support for A3LYF6 as seed ortholog is 100%.
Bootstrap support for B5YKP7 as seed ortholog is 100%.

Group of orthologs #136. Best score 147 bits
Score difference with first non-orthologous sequence - S.stipitis:34 T.yellowstonii:147

A3LR58              	100.00%		B5YGH3              	100.00%
A3LWS3              	52.97%		
Bootstrap support for A3LR58 as seed ortholog is 77%.
Bootstrap support for B5YGH3 as seed ortholog is 100%.

Group of orthologs #137. Best score 147 bits
Score difference with first non-orthologous sequence - S.stipitis:100 T.yellowstonii:147

A3GFR4              	100.00%		B5YG52              	100.00%
Bootstrap support for A3GFR4 as seed ortholog is 99%.
Bootstrap support for B5YG52 as seed ortholog is 100%.

Group of orthologs #138. Best score 147 bits
Score difference with first non-orthologous sequence - S.stipitis:147 T.yellowstonii:147

A3LTZ7              	100.00%		B5YJB4              	100.00%
Bootstrap support for A3LTZ7 as seed ortholog is 100%.
Bootstrap support for B5YJB4 as seed ortholog is 100%.

Group of orthologs #139. Best score 146 bits
Score difference with first non-orthologous sequence - S.stipitis:146 T.yellowstonii:146

A3LYB2              	100.00%		B5YI29              	100.00%
A3GHW1              	27.87%		
Bootstrap support for A3LYB2 as seed ortholog is 100%.
Bootstrap support for B5YI29 as seed ortholog is 100%.

Group of orthologs #140. Best score 145 bits
Score difference with first non-orthologous sequence - S.stipitis:145 T.yellowstonii:145

P34736              	100.00%		B5YKM2              	100.00%
A3GIF0              	29.38%		B5YG84              	5.80%
Bootstrap support for P34736 as seed ortholog is 100%.
Bootstrap support for B5YKM2 as seed ortholog is 100%.

Group of orthologs #141. Best score 145 bits
Score difference with first non-orthologous sequence - S.stipitis:49 T.yellowstonii:145

A3LR26              	100.00%		B5YKW6              	100.00%
A3LY33              	35.60%		
Bootstrap support for A3LR26 as seed ortholog is 95%.
Bootstrap support for B5YKW6 as seed ortholog is 100%.

Group of orthologs #142. Best score 145 bits
Score difference with first non-orthologous sequence - S.stipitis:145 T.yellowstonii:58

A3LXK3              	100.00%		B5YHN3              	100.00%
A3LQM4              	5.32%		
Bootstrap support for A3LXK3 as seed ortholog is 100%.
Bootstrap support for B5YHN3 as seed ortholog is 93%.

Group of orthologs #143. Best score 145 bits
Score difference with first non-orthologous sequence - S.stipitis:145 T.yellowstonii:145

A3LVL2              	100.00%		B5YJ36              	100.00%
Bootstrap support for A3LVL2 as seed ortholog is 100%.
Bootstrap support for B5YJ36 as seed ortholog is 100%.

Group of orthologs #144. Best score 144 bits
Score difference with first non-orthologous sequence - S.stipitis:45 T.yellowstonii:144

A3LSQ4              	100.00%		B5YJX1              	100.00%
A3LT79              	30.02%		
A3GHR6              	26.53%		
A3GHL4              	25.21%		
A3LSI9              	24.88%		
Bootstrap support for A3LSQ4 as seed ortholog is 95%.
Bootstrap support for B5YJX1 as seed ortholog is 100%.

Group of orthologs #145. Best score 144 bits
Score difference with first non-orthologous sequence - S.stipitis:144 T.yellowstonii:144

A3LNX3              	100.00%		B5YKP5              	100.00%
Bootstrap support for A3LNX3 as seed ortholog is 100%.
Bootstrap support for B5YKP5 as seed ortholog is 100%.

Group of orthologs #146. Best score 144 bits
Score difference with first non-orthologous sequence - S.stipitis:1 T.yellowstonii:144

A3LSN6              	100.00%		B5YHD1              	100.00%
Bootstrap support for A3LSN6 as seed ortholog is 63%.
Alternative seed ortholog is A3LZU7 (1 bits away from this cluster)
Bootstrap support for B5YHD1 as seed ortholog is 100%.

Group of orthologs #147. Best score 143 bits
Score difference with first non-orthologous sequence - S.stipitis:143 T.yellowstonii:143

A3GG17              	100.00%		B5YKH5              	100.00%
A3M0J8              	34.63%		
Bootstrap support for A3GG17 as seed ortholog is 100%.
Bootstrap support for B5YKH5 as seed ortholog is 100%.

Group of orthologs #148. Best score 143 bits
Score difference with first non-orthologous sequence - S.stipitis:143 T.yellowstonii:143

A3LQ27              	100.00%		B5YFN4              	100.00%
Bootstrap support for A3LQ27 as seed ortholog is 100%.
Bootstrap support for B5YFN4 as seed ortholog is 100%.

Group of orthologs #149. Best score 143 bits
Score difference with first non-orthologous sequence - S.stipitis:6 T.yellowstonii:143

A3LYB1              	100.00%		B5YG74              	100.00%
Bootstrap support for A3LYB1 as seed ortholog is 62%.
Alternative seed ortholog is A3LTY5 (6 bits away from this cluster)
Bootstrap support for B5YG74 as seed ortholog is 100%.

Group of orthologs #150. Best score 143 bits
Score difference with first non-orthologous sequence - S.stipitis:143 T.yellowstonii:143

A3LWW1              	100.00%		B5YKF9              	100.00%
Bootstrap support for A3LWW1 as seed ortholog is 100%.
Bootstrap support for B5YKF9 as seed ortholog is 100%.

Group of orthologs #151. Best score 142 bits
Score difference with first non-orthologous sequence - S.stipitis:142 T.yellowstonii:142

A3GF89              	100.00%		B5YGC1              	100.00%
Bootstrap support for A3GF89 as seed ortholog is 100%.
Bootstrap support for B5YGC1 as seed ortholog is 100%.

Group of orthologs #152. Best score 141 bits
Score difference with first non-orthologous sequence - S.stipitis:30 T.yellowstonii:141

A3GGB2              	100.00%		B5YFM1              	100.00%
A3GGB1              	61.21%		
Bootstrap support for A3GGB2 as seed ortholog is 83%.
Bootstrap support for B5YFM1 as seed ortholog is 100%.

Group of orthologs #153. Best score 141 bits
Score difference with first non-orthologous sequence - S.stipitis:141 T.yellowstonii:141

A3LYR2              	100.00%		B5YH28              	100.00%
                    	       		B5YH27              	12.65%
Bootstrap support for A3LYR2 as seed ortholog is 100%.
Bootstrap support for B5YH28 as seed ortholog is 100%.

Group of orthologs #154. Best score 140 bits
Score difference with first non-orthologous sequence - S.stipitis:30 T.yellowstonii:140

A3LUM6              	100.00%		B5YIN0              	100.00%
                    	       		B5YHG6              	6.57%
                    	       		B5YIE3              	6.57%
Bootstrap support for A3LUM6 as seed ortholog is 76%.
Bootstrap support for B5YIN0 as seed ortholog is 100%.

Group of orthologs #155. Best score 140 bits
Score difference with first non-orthologous sequence - S.stipitis:140 T.yellowstonii:140

A3LQ89              	100.00%		B5YK93              	100.00%
Bootstrap support for A3LQ89 as seed ortholog is 100%.
Bootstrap support for B5YK93 as seed ortholog is 100%.

Group of orthologs #156. Best score 139 bits
Score difference with first non-orthologous sequence - S.stipitis:37 T.yellowstonii:139

A3LZC9              	100.00%		B5YJI4              	100.00%
Bootstrap support for A3LZC9 as seed ortholog is 77%.
Bootstrap support for B5YJI4 as seed ortholog is 100%.

Group of orthologs #157. Best score 138 bits
Score difference with first non-orthologous sequence - S.stipitis:138 T.yellowstonii:138

A3LQN4              	100.00%		B5YI11              	100.00%
A3GHZ7              	12.26%		
Bootstrap support for A3LQN4 as seed ortholog is 100%.
Bootstrap support for B5YI11 as seed ortholog is 100%.

Group of orthologs #158. Best score 137 bits
Score difference with first non-orthologous sequence - S.stipitis:137 T.yellowstonii:137

A3LYI9              	100.00%		B5YJK9              	100.00%
A3LU81              	52.16%		
Bootstrap support for A3LYI9 as seed ortholog is 100%.
Bootstrap support for B5YJK9 as seed ortholog is 100%.

Group of orthologs #159. Best score 136 bits
Score difference with first non-orthologous sequence - S.stipitis:86 T.yellowstonii:59

A3LQH4              	100.00%		B5YJ43              	100.00%
Bootstrap support for A3LQH4 as seed ortholog is 99%.
Bootstrap support for B5YJ43 as seed ortholog is 96%.

Group of orthologs #160. Best score 136 bits
Score difference with first non-orthologous sequence - S.stipitis:136 T.yellowstonii:136

A3LT61              	100.00%		B5YHS2              	100.00%
Bootstrap support for A3LT61 as seed ortholog is 100%.
Bootstrap support for B5YHS2 as seed ortholog is 100%.

Group of orthologs #161. Best score 135 bits
Score difference with first non-orthologous sequence - S.stipitis:135 T.yellowstonii:135

A3GFI1              	100.00%		B5YG03              	100.00%
A3M0D5              	13.23%		
Bootstrap support for A3GFI1 as seed ortholog is 100%.
Bootstrap support for B5YG03 as seed ortholog is 100%.

Group of orthologs #162. Best score 134 bits
Score difference with first non-orthologous sequence - S.stipitis:134 T.yellowstonii:134

A3GGU9              	100.00%		B5YGH6              	100.00%
Bootstrap support for A3GGU9 as seed ortholog is 100%.
Bootstrap support for B5YGH6 as seed ortholog is 100%.

Group of orthologs #163. Best score 133 bits
Score difference with first non-orthologous sequence - S.stipitis:133 T.yellowstonii:133

A3LTC2              	100.00%		B5YGV0              	100.00%
Bootstrap support for A3LTC2 as seed ortholog is 100%.
Bootstrap support for B5YGV0 as seed ortholog is 100%.

Group of orthologs #164. Best score 133 bits
Score difference with first non-orthologous sequence - S.stipitis:31 T.yellowstonii:133

P22144              	100.00%		B5YKT8              	100.00%
Bootstrap support for P22144 as seed ortholog is 80%.
Bootstrap support for B5YKT8 as seed ortholog is 100%.

Group of orthologs #165. Best score 131 bits
Score difference with first non-orthologous sequence - S.stipitis:131 T.yellowstonii:131

A3LQN1              	100.00%		B5YHC7              	100.00%
Bootstrap support for A3LQN1 as seed ortholog is 100%.
Bootstrap support for B5YHC7 as seed ortholog is 100%.

Group of orthologs #166. Best score 131 bits
Score difference with first non-orthologous sequence - S.stipitis:131 T.yellowstonii:29

A3LX74              	100.00%		B5YH63              	100.00%
Bootstrap support for A3LX74 as seed ortholog is 100%.
Bootstrap support for B5YH63 as seed ortholog is 74%.
Alternative seed ortholog is B5YL42 (29 bits away from this cluster)

Group of orthologs #167. Best score 130 bits
Score difference with first non-orthologous sequence - S.stipitis:130 T.yellowstonii:80

A3LTQ9              	100.00%		B5YL73              	100.00%
A3LTQ8              	64.71%		
A3M051              	54.33%		
A3M050              	36.33%		
Bootstrap support for A3LTQ9 as seed ortholog is 100%.
Bootstrap support for B5YL73 as seed ortholog is 99%.

Group of orthologs #168. Best score 130 bits
Score difference with first non-orthologous sequence - S.stipitis:130 T.yellowstonii:130

A3GH24              	100.00%		B5YG47              	100.00%
Bootstrap support for A3GH24 as seed ortholog is 100%.
Bootstrap support for B5YG47 as seed ortholog is 100%.

Group of orthologs #169. Best score 129 bits
Score difference with first non-orthologous sequence - S.stipitis:13 T.yellowstonii:129

A3LQ02              	100.00%		B5YJT4              	100.00%
Bootstrap support for A3LQ02 as seed ortholog is 67%.
Alternative seed ortholog is A3GHN0 (13 bits away from this cluster)
Bootstrap support for B5YJT4 as seed ortholog is 100%.

Group of orthologs #170. Best score 127 bits
Score difference with first non-orthologous sequence - S.stipitis:87 T.yellowstonii:127

A3LXQ6              	100.00%		B5YGD9              	100.00%
Bootstrap support for A3LXQ6 as seed ortholog is 99%.
Bootstrap support for B5YGD9 as seed ortholog is 100%.

Group of orthologs #171. Best score 126 bits
Score difference with first non-orthologous sequence - S.stipitis:126 T.yellowstonii:126

A3LNL6              	100.00%		B5YFW2              	100.00%
Bootstrap support for A3LNL6 as seed ortholog is 100%.
Bootstrap support for B5YFW2 as seed ortholog is 100%.

Group of orthologs #172. Best score 125 bits
Score difference with first non-orthologous sequence - S.stipitis:125 T.yellowstonii:125

A3LRW9              	100.00%		B5YKI7              	100.00%
Bootstrap support for A3LRW9 as seed ortholog is 100%.
Bootstrap support for B5YKI7 as seed ortholog is 100%.

Group of orthologs #173. Best score 123 bits
Score difference with first non-orthologous sequence - S.stipitis:123 T.yellowstonii:123

A3GHH1              	100.00%		B5YKX8              	100.00%
Bootstrap support for A3GHH1 as seed ortholog is 100%.
Bootstrap support for B5YKX8 as seed ortholog is 100%.

Group of orthologs #174. Best score 122 bits
Score difference with first non-orthologous sequence - S.stipitis:8 T.yellowstonii:122

A3LS68              	100.00%		B5YKX4              	100.00%
Bootstrap support for A3LS68 as seed ortholog is 57%.
Alternative seed ortholog is A3LSY4 (8 bits away from this cluster)
Bootstrap support for B5YKX4 as seed ortholog is 100%.

Group of orthologs #175. Best score 121 bits
Score difference with first non-orthologous sequence - S.stipitis:121 T.yellowstonii:121

A3LP92              	100.00%		B5YGI3              	100.00%
Bootstrap support for A3LP92 as seed ortholog is 100%.
Bootstrap support for B5YGI3 as seed ortholog is 100%.

Group of orthologs #176. Best score 118 bits
Score difference with first non-orthologous sequence - S.stipitis:12 T.yellowstonii:118

A3LRA4              	100.00%		B5YG19              	100.00%
Bootstrap support for A3LRA4 as seed ortholog is 59%.
Alternative seed ortholog is A3LMT5 (12 bits away from this cluster)
Bootstrap support for B5YG19 as seed ortholog is 100%.

Group of orthologs #177. Best score 115 bits
Score difference with first non-orthologous sequence - S.stipitis:115 T.yellowstonii:115

Q9C1D4              	100.00%		B5YKN8              	100.00%
Bootstrap support for Q9C1D4 as seed ortholog is 100%.
Bootstrap support for B5YKN8 as seed ortholog is 100%.

Group of orthologs #178. Best score 114 bits
Score difference with first non-orthologous sequence - S.stipitis:114 T.yellowstonii:114

A3LNM6              	100.00%		B5YIC0              	100.00%
Bootstrap support for A3LNM6 as seed ortholog is 100%.
Bootstrap support for B5YIC0 as seed ortholog is 100%.

Group of orthologs #179. Best score 114 bits
Score difference with first non-orthologous sequence - S.stipitis:114 T.yellowstonii:114

A3LVN3              	100.00%		B5YGI5              	100.00%
Bootstrap support for A3LVN3 as seed ortholog is 100%.
Bootstrap support for B5YGI5 as seed ortholog is 100%.

Group of orthologs #180. Best score 114 bits
Score difference with first non-orthologous sequence - S.stipitis:114 T.yellowstonii:114

A3LWT3              	100.00%		B5YHK5              	100.00%
Bootstrap support for A3LWT3 as seed ortholog is 100%.
Bootstrap support for B5YHK5 as seed ortholog is 100%.

Group of orthologs #181. Best score 113 bits
Score difference with first non-orthologous sequence - S.stipitis:113 T.yellowstonii:113

A3M0I4              	100.00%		B5YFM8              	100.00%
Bootstrap support for A3M0I4 as seed ortholog is 100%.
Bootstrap support for B5YFM8 as seed ortholog is 100%.

Group of orthologs #182. Best score 112 bits
Score difference with first non-orthologous sequence - S.stipitis:112 T.yellowstonii:112

A3LR66              	100.00%		B5YG92              	100.00%
                    	       		B5YGV2              	23.00%
Bootstrap support for A3LR66 as seed ortholog is 100%.
Bootstrap support for B5YG92 as seed ortholog is 100%.

Group of orthologs #183. Best score 112 bits
Score difference with first non-orthologous sequence - S.stipitis:38 T.yellowstonii:112

A3LUW1              	100.00%		B5YIG5              	100.00%
Bootstrap support for A3LUW1 as seed ortholog is 80%.
Bootstrap support for B5YIG5 as seed ortholog is 100%.

Group of orthologs #184. Best score 111 bits
Score difference with first non-orthologous sequence - S.stipitis:111 T.yellowstonii:111

A3LQB2              	100.00%		B5YJX0              	100.00%
Bootstrap support for A3LQB2 as seed ortholog is 100%.
Bootstrap support for B5YJX0 as seed ortholog is 100%.

Group of orthologs #185. Best score 110 bits
Score difference with first non-orthologous sequence - S.stipitis:46 T.yellowstonii:110

A3LSV4              	100.00%		B5YH65              	100.00%
Bootstrap support for A3LSV4 as seed ortholog is 87%.
Bootstrap support for B5YH65 as seed ortholog is 100%.

Group of orthologs #186. Best score 109 bits
Score difference with first non-orthologous sequence - S.stipitis:109 T.yellowstonii:109

A3LR07              	100.00%		B5YJT9              	100.00%
A3GHM9              	70.81%		
A3LP41              	35.90%		
A3GH68              	6.06%		
Bootstrap support for A3LR07 as seed ortholog is 100%.
Bootstrap support for B5YJT9 as seed ortholog is 100%.

Group of orthologs #187. Best score 109 bits
Score difference with first non-orthologous sequence - S.stipitis:17 T.yellowstonii:109

A3LV83              	100.00%		B5YJW3              	100.00%
A3LN35              	13.03%		
A3GHS5              	9.36%		
Bootstrap support for A3LV83 as seed ortholog is 65%.
Alternative seed ortholog is A3LZ70 (17 bits away from this cluster)
Bootstrap support for B5YJW3 as seed ortholog is 100%.

Group of orthologs #188. Best score 109 bits
Score difference with first non-orthologous sequence - S.stipitis:109 T.yellowstonii:109

A3LN60              	100.00%		B5YJ78              	100.00%
Bootstrap support for A3LN60 as seed ortholog is 100%.
Bootstrap support for B5YJ78 as seed ortholog is 100%.

Group of orthologs #189. Best score 109 bits
Score difference with first non-orthologous sequence - S.stipitis:42 T.yellowstonii:109

A3LWK9              	100.00%		B5YG37              	100.00%
Bootstrap support for A3LWK9 as seed ortholog is 97%.
Bootstrap support for B5YG37 as seed ortholog is 100%.

Group of orthologs #190. Best score 107 bits
Score difference with first non-orthologous sequence - S.stipitis:107 T.yellowstonii:31

A3GET1              	100.00%		B5YGB4              	100.00%
Bootstrap support for A3GET1 as seed ortholog is 100%.
Bootstrap support for B5YGB4 as seed ortholog is 80%.

Group of orthologs #191. Best score 106 bits
Score difference with first non-orthologous sequence - S.stipitis:106 T.yellowstonii:106

A3GI57              	100.00%		B5YGF7              	100.00%
Bootstrap support for A3GI57 as seed ortholog is 100%.
Bootstrap support for B5YGF7 as seed ortholog is 100%.

Group of orthologs #192. Best score 105 bits
Score difference with first non-orthologous sequence - S.stipitis:105 T.yellowstonii:105

A3LQN3              	100.00%		B5YJ68              	100.00%
Bootstrap support for A3LQN3 as seed ortholog is 100%.
Bootstrap support for B5YJ68 as seed ortholog is 100%.

Group of orthologs #193. Best score 105 bits
Score difference with first non-orthologous sequence - S.stipitis:105 T.yellowstonii:105

A3LWE2              	100.00%		B5YLB7              	100.00%
Bootstrap support for A3LWE2 as seed ortholog is 100%.
Bootstrap support for B5YLB7 as seed ortholog is 100%.

Group of orthologs #194. Best score 104 bits
Score difference with first non-orthologous sequence - S.stipitis:104 T.yellowstonii:104

A3GH60              	100.00%		B5YIL6              	100.00%
Bootstrap support for A3GH60 as seed ortholog is 100%.
Bootstrap support for B5YIL6 as seed ortholog is 100%.

Group of orthologs #195. Best score 104 bits
Score difference with first non-orthologous sequence - S.stipitis:104 T.yellowstonii:104

A3M007              	100.00%		B5YL31              	100.00%
Bootstrap support for A3M007 as seed ortholog is 100%.
Bootstrap support for B5YL31 as seed ortholog is 100%.

Group of orthologs #196. Best score 102 bits
Score difference with first non-orthologous sequence - S.stipitis:102 T.yellowstonii:102

A3GGD9              	100.00%		B5YGI4              	100.00%
A3GH28              	39.81%		
A3LW84              	35.56%		
Bootstrap support for A3GGD9 as seed ortholog is 100%.
Bootstrap support for B5YGI4 as seed ortholog is 100%.

Group of orthologs #197. Best score 102 bits
Score difference with first non-orthologous sequence - S.stipitis:102 T.yellowstonii:102

A3LSN8              	100.00%		B5YFY9              	100.00%
Bootstrap support for A3LSN8 as seed ortholog is 100%.
Bootstrap support for B5YFY9 as seed ortholog is 100%.

Group of orthologs #198. Best score 102 bits
Score difference with first non-orthologous sequence - S.stipitis:102 T.yellowstonii:102

A3M089              	100.00%		B5YIL4              	100.00%
Bootstrap support for A3M089 as seed ortholog is 100%.
Bootstrap support for B5YIL4 as seed ortholog is 100%.

Group of orthologs #199. Best score 101 bits
Score difference with first non-orthologous sequence - S.stipitis:48 T.yellowstonii:101

A3GFG6              	100.00%		B5YGH9              	100.00%
Bootstrap support for A3GFG6 as seed ortholog is 98%.
Bootstrap support for B5YGH9 as seed ortholog is 100%.

Group of orthologs #200. Best score 101 bits
Score difference with first non-orthologous sequence - S.stipitis:101 T.yellowstonii:101

A3GH23              	100.00%		B5YG32              	100.00%
Bootstrap support for A3GH23 as seed ortholog is 100%.
Bootstrap support for B5YG32 as seed ortholog is 100%.

Group of orthologs #201. Best score 101 bits
Score difference with first non-orthologous sequence - S.stipitis:101 T.yellowstonii:101

A3GI53              	100.00%		B5YKS1              	100.00%
Bootstrap support for A3GI53 as seed ortholog is 100%.
Bootstrap support for B5YKS1 as seed ortholog is 100%.

Group of orthologs #202. Best score 101 bits
Score difference with first non-orthologous sequence - S.stipitis:101 T.yellowstonii:101

A3LZH6              	100.00%		B5YFW1              	100.00%
Bootstrap support for A3LZH6 as seed ortholog is 100%.
Bootstrap support for B5YFW1 as seed ortholog is 100%.

Group of orthologs #203. Best score 100 bits
Score difference with first non-orthologous sequence - S.stipitis:54 T.yellowstonii:100

A3LPR7              	100.00%		B5YJZ6              	100.00%
Bootstrap support for A3LPR7 as seed ortholog is 84%.
Bootstrap support for B5YJZ6 as seed ortholog is 100%.

Group of orthologs #204. Best score 99 bits
Score difference with first non-orthologous sequence - S.stipitis:9 T.yellowstonii:99

A3GI80              	100.00%		B5YJ85              	100.00%
A3GG69              	7.54%		
Bootstrap support for A3GI80 as seed ortholog is 61%.
Alternative seed ortholog is A3LV78 (9 bits away from this cluster)
Bootstrap support for B5YJ85 as seed ortholog is 100%.

Group of orthologs #205. Best score 99 bits
Score difference with first non-orthologous sequence - S.stipitis:99 T.yellowstonii:99

A3GI41              	100.00%		B5YHP0              	100.00%
Bootstrap support for A3GI41 as seed ortholog is 100%.
Bootstrap support for B5YHP0 as seed ortholog is 100%.

Group of orthologs #206. Best score 99 bits
Score difference with first non-orthologous sequence - S.stipitis:32 T.yellowstonii:31

A3LQX4              	100.00%		B5YH53              	100.00%
Bootstrap support for A3LQX4 as seed ortholog is 73%.
Alternative seed ortholog is A3LZK5 (32 bits away from this cluster)
Bootstrap support for B5YH53 as seed ortholog is 80%.

Group of orthologs #207. Best score 99 bits
Score difference with first non-orthologous sequence - S.stipitis:99 T.yellowstonii:99

A3LST6              	100.00%		B5YHK4              	100.00%
Bootstrap support for A3LST6 as seed ortholog is 100%.
Bootstrap support for B5YHK4 as seed ortholog is 100%.

Group of orthologs #208. Best score 97 bits
Score difference with first non-orthologous sequence - S.stipitis:97 T.yellowstonii:97

A3LSD2              	100.00%		B5YKK4              	100.00%
A3LQR8              	52.17%		
A3LZU9              	27.68%		
Bootstrap support for A3LSD2 as seed ortholog is 100%.
Bootstrap support for B5YKK4 as seed ortholog is 100%.

Group of orthologs #209. Best score 97 bits
Score difference with first non-orthologous sequence - S.stipitis:97 T.yellowstonii:97

A3GFH1              	100.00%		B5YJQ6              	100.00%
Bootstrap support for A3GFH1 as seed ortholog is 100%.
Bootstrap support for B5YJQ6 as seed ortholog is 100%.

Group of orthologs #210. Best score 97 bits
Score difference with first non-orthologous sequence - S.stipitis:97 T.yellowstonii:97

A3LQP9              	100.00%		B5YHK1              	100.00%
Bootstrap support for A3LQP9 as seed ortholog is 100%.
Bootstrap support for B5YHK1 as seed ortholog is 100%.

Group of orthologs #211. Best score 96 bits
Score difference with first non-orthologous sequence - S.stipitis:96 T.yellowstonii:96

A3GGY9              	100.00%		B5YGI1              	100.00%
Bootstrap support for A3GGY9 as seed ortholog is 100%.
Bootstrap support for B5YGI1 as seed ortholog is 100%.

Group of orthologs #212. Best score 96 bits
Score difference with first non-orthologous sequence - S.stipitis:96 T.yellowstonii:96

A3LVT7              	100.00%		B5YJ89              	100.00%
Bootstrap support for A3LVT7 as seed ortholog is 100%.
Bootstrap support for B5YJ89 as seed ortholog is 100%.

Group of orthologs #213. Best score 96 bits
Score difference with first non-orthologous sequence - S.stipitis:96 T.yellowstonii:96

A3M0G0              	100.00%		B5YI23              	100.00%
Bootstrap support for A3M0G0 as seed ortholog is 100%.
Bootstrap support for B5YI23 as seed ortholog is 100%.

Group of orthologs #214. Best score 94 bits
Score difference with first non-orthologous sequence - S.stipitis:94 T.yellowstonii:94

A3LUL1              	100.00%		B5YHE3              	100.00%
Bootstrap support for A3LUL1 as seed ortholog is 100%.
Bootstrap support for B5YHE3 as seed ortholog is 100%.

Group of orthologs #215. Best score 93 bits
Score difference with first non-orthologous sequence - S.stipitis:93 T.yellowstonii:93

A3GGC4              	100.00%		B5YFP2              	100.00%
Bootstrap support for A3GGC4 as seed ortholog is 100%.
Bootstrap support for B5YFP2 as seed ortholog is 100%.

Group of orthologs #216. Best score 93 bits
Score difference with first non-orthologous sequence - S.stipitis:93 T.yellowstonii:93

A3LXT1              	100.00%		B5YJJ3              	100.00%
Bootstrap support for A3LXT1 as seed ortholog is 100%.
Bootstrap support for B5YJJ3 as seed ortholog is 100%.

Group of orthologs #217. Best score 90 bits
Score difference with first non-orthologous sequence - S.stipitis:90 T.yellowstonii:90

A3GFV7              	100.00%		B5YHQ1              	100.00%
Bootstrap support for A3GFV7 as seed ortholog is 100%.
Bootstrap support for B5YHQ1 as seed ortholog is 100%.

Group of orthologs #218. Best score 90 bits
Score difference with first non-orthologous sequence - S.stipitis:90 T.yellowstonii:90

A3M0N5              	100.00%		B5YHS9              	100.00%
Bootstrap support for A3M0N5 as seed ortholog is 100%.
Bootstrap support for B5YHS9 as seed ortholog is 100%.

Group of orthologs #219. Best score 89 bits
Score difference with first non-orthologous sequence - S.stipitis:89 T.yellowstonii:89

A3LWJ5              	100.00%		B5YKX9              	100.00%
A3LVH9              	16.01%		
A3GID9              	15.69%		
Bootstrap support for A3LWJ5 as seed ortholog is 100%.
Bootstrap support for B5YKX9 as seed ortholog is 100%.

Group of orthologs #220. Best score 89 bits
Score difference with first non-orthologous sequence - S.stipitis:89 T.yellowstonii:89

A3GGB3              	100.00%		B5YKU6              	100.00%
Bootstrap support for A3GGB3 as seed ortholog is 100%.
Bootstrap support for B5YKU6 as seed ortholog is 100%.

Group of orthologs #221. Best score 87 bits
Score difference with first non-orthologous sequence - S.stipitis:87 T.yellowstonii:87

A3LRU4              	100.00%		B5YJ55              	100.00%
Bootstrap support for A3LRU4 as seed ortholog is 100%.
Bootstrap support for B5YJ55 as seed ortholog is 100%.

Group of orthologs #222. Best score 85 bits
Score difference with first non-orthologous sequence - S.stipitis:13 T.yellowstonii:85

A3GI91              	100.00%		B5YI85              	100.00%
A3GG43              	5.00%		
Bootstrap support for A3GI91 as seed ortholog is 76%.
Bootstrap support for B5YI85 as seed ortholog is 100%.

Group of orthologs #223. Best score 85 bits
Score difference with first non-orthologous sequence - S.stipitis:85 T.yellowstonii:85

A3GHN3              	100.00%		B5YK64              	100.00%
Bootstrap support for A3GHN3 as seed ortholog is 100%.
Bootstrap support for B5YK64 as seed ortholog is 100%.

Group of orthologs #224. Best score 85 bits
Score difference with first non-orthologous sequence - S.stipitis:85 T.yellowstonii:85

A3LTD8              	100.00%		B5YKG8              	100.00%
Bootstrap support for A3LTD8 as seed ortholog is 100%.
Bootstrap support for B5YKG8 as seed ortholog is 100%.

Group of orthologs #225. Best score 85 bits
Score difference with first non-orthologous sequence - S.stipitis:28 T.yellowstonii:85

A3LYH4              	100.00%		B5YG35              	100.00%
Bootstrap support for A3LYH4 as seed ortholog is 88%.
Bootstrap support for B5YG35 as seed ortholog is 100%.

Group of orthologs #226. Best score 85 bits
Score difference with first non-orthologous sequence - S.stipitis:85 T.yellowstonii:85

A3M0H3              	100.00%		B5YH60              	100.00%
Bootstrap support for A3M0H3 as seed ortholog is 100%.
Bootstrap support for B5YH60 as seed ortholog is 100%.

Group of orthologs #227. Best score 84 bits
Score difference with first non-orthologous sequence - S.stipitis:84 T.yellowstonii:84

A3LYA4              	100.00%		B5YJJ5              	100.00%
Bootstrap support for A3LYA4 as seed ortholog is 100%.
Bootstrap support for B5YJJ5 as seed ortholog is 100%.

Group of orthologs #228. Best score 83 bits
Score difference with first non-orthologous sequence - S.stipitis:83 T.yellowstonii:83

A3LRB1              	100.00%		B5YIE4              	100.00%
Bootstrap support for A3LRB1 as seed ortholog is 100%.
Bootstrap support for B5YIE4 as seed ortholog is 100%.

Group of orthologs #229. Best score 83 bits
Score difference with first non-orthologous sequence - S.stipitis:83 T.yellowstonii:83

A3LXJ4              	100.00%		B5YHG5              	100.00%
Bootstrap support for A3LXJ4 as seed ortholog is 100%.
Bootstrap support for B5YHG5 as seed ortholog is 100%.

Group of orthologs #230. Best score 82 bits
Score difference with first non-orthologous sequence - S.stipitis:82 T.yellowstonii:82

A3LYD7              	100.00%		B5YFV9              	100.00%
Bootstrap support for A3LYD7 as seed ortholog is 100%.
Bootstrap support for B5YFV9 as seed ortholog is 100%.

Group of orthologs #231. Best score 82 bits
Score difference with first non-orthologous sequence - S.stipitis:82 T.yellowstonii:82

A3LYP8              	100.00%		B5YJV1              	100.00%
Bootstrap support for A3LYP8 as seed ortholog is 100%.
Bootstrap support for B5YJV1 as seed ortholog is 100%.

Group of orthologs #232. Best score 82 bits
Score difference with first non-orthologous sequence - S.stipitis:82 T.yellowstonii:82

A3LYA6              	100.00%		B5YKC3              	100.00%
Bootstrap support for A3LYA6 as seed ortholog is 100%.
Bootstrap support for B5YKC3 as seed ortholog is 100%.

Group of orthologs #233. Best score 81 bits
Score difference with first non-orthologous sequence - S.stipitis:34 T.yellowstonii:81

A3GFA6              	100.00%		B5YI05              	100.00%
                    	       		B5YIL0              	5.38%
Bootstrap support for A3GFA6 as seed ortholog is 90%.
Bootstrap support for B5YI05 as seed ortholog is 100%.

Group of orthologs #234. Best score 81 bits
Score difference with first non-orthologous sequence - S.stipitis:25 T.yellowstonii:81

A3LUZ5              	100.00%		B5YFZ1              	100.00%
Bootstrap support for A3LUZ5 as seed ortholog is 84%.
Bootstrap support for B5YFZ1 as seed ortholog is 100%.

Group of orthologs #235. Best score 81 bits
Score difference with first non-orthologous sequence - S.stipitis:81 T.yellowstonii:81

A3M025              	100.00%		B5YHB2              	100.00%
Bootstrap support for A3M025 as seed ortholog is 100%.
Bootstrap support for B5YHB2 as seed ortholog is 100%.

Group of orthologs #236. Best score 80 bits
Score difference with first non-orthologous sequence - S.stipitis:80 T.yellowstonii:80

A3LVU4              	100.00%		B5YL62              	100.00%
A3LNY1              	73.43%		
Bootstrap support for A3LVU4 as seed ortholog is 100%.
Bootstrap support for B5YL62 as seed ortholog is 100%.

Group of orthologs #237. Best score 80 bits
Score difference with first non-orthologous sequence - S.stipitis:80 T.yellowstonii:80

A3LU64              	100.00%		B5YL18              	100.00%
Bootstrap support for A3LU64 as seed ortholog is 100%.
Bootstrap support for B5YL18 as seed ortholog is 100%.

Group of orthologs #238. Best score 79 bits
Score difference with first non-orthologous sequence - S.stipitis:18 T.yellowstonii:79

A3LSH2              	100.00%		B5YG25              	100.00%
Bootstrap support for A3LSH2 as seed ortholog is 78%.
Bootstrap support for B5YG25 as seed ortholog is 100%.

Group of orthologs #239. Best score 77 bits
Score difference with first non-orthologous sequence - S.stipitis:77 T.yellowstonii:77

A3GFH5              	100.00%		B5YG30              	100.00%
Bootstrap support for A3GFH5 as seed ortholog is 100%.
Bootstrap support for B5YG30 as seed ortholog is 100%.

Group of orthologs #240. Best score 77 bits
Score difference with first non-orthologous sequence - S.stipitis:77 T.yellowstonii:77

A3GFA8              	100.00%		B5YKL4              	100.00%
Bootstrap support for A3GFA8 as seed ortholog is 100%.
Bootstrap support for B5YKL4 as seed ortholog is 100%.

Group of orthologs #241. Best score 77 bits
Score difference with first non-orthologous sequence - S.stipitis:77 T.yellowstonii:77

A3LQL5              	100.00%		B5YJY2              	100.00%
Bootstrap support for A3LQL5 as seed ortholog is 100%.
Bootstrap support for B5YJY2 as seed ortholog is 100%.

Group of orthologs #242. Best score 77 bits
Score difference with first non-orthologous sequence - S.stipitis:77 T.yellowstonii:77

A3LVK6              	100.00%		B5YHP2              	100.00%
Bootstrap support for A3LVK6 as seed ortholog is 100%.
Bootstrap support for B5YHP2 as seed ortholog is 100%.

Group of orthologs #243. Best score 77 bits
Score difference with first non-orthologous sequence - S.stipitis:77 T.yellowstonii:77

A3LXX9              	100.00%		B5YHI1              	100.00%
Bootstrap support for A3LXX9 as seed ortholog is 100%.
Bootstrap support for B5YHI1 as seed ortholog is 100%.

Group of orthologs #244. Best score 76 bits
Score difference with first non-orthologous sequence - S.stipitis:17 T.yellowstonii:76

A3LQM6              	100.00%		B5YG51              	100.00%
Bootstrap support for A3LQM6 as seed ortholog is 78%.
Bootstrap support for B5YG51 as seed ortholog is 100%.

Group of orthologs #245. Best score 76 bits
Score difference with first non-orthologous sequence - S.stipitis:76 T.yellowstonii:76

A3LQG8              	100.00%		B5YK63              	100.00%
Bootstrap support for A3LQG8 as seed ortholog is 100%.
Bootstrap support for B5YK63 as seed ortholog is 100%.

Group of orthologs #246. Best score 76 bits
Score difference with first non-orthologous sequence - S.stipitis:76 T.yellowstonii:76

A3LVJ4              	100.00%		B5YHY2              	100.00%
Bootstrap support for A3LVJ4 as seed ortholog is 100%.
Bootstrap support for B5YHY2 as seed ortholog is 100%.

Group of orthologs #247. Best score 75 bits
Score difference with first non-orthologous sequence - S.stipitis:75 T.yellowstonii:75

A3GG65              	100.00%		B5YG29              	100.00%
Bootstrap support for A3GG65 as seed ortholog is 100%.
Bootstrap support for B5YG29 as seed ortholog is 100%.

Group of orthologs #248. Best score 75 bits
Score difference with first non-orthologous sequence - S.stipitis:6 T.yellowstonii:75

A3LPP1              	100.00%		B5YG54              	100.00%
Bootstrap support for A3LPP1 as seed ortholog is 56%.
Alternative seed ortholog is A3LRM0 (6 bits away from this cluster)
Bootstrap support for B5YG54 as seed ortholog is 100%.

Group of orthologs #249. Best score 75 bits
Score difference with first non-orthologous sequence - S.stipitis:75 T.yellowstonii:75

A3GHW9              	100.00%		B5YJX3              	100.00%
Bootstrap support for A3GHW9 as seed ortholog is 100%.
Bootstrap support for B5YJX3 as seed ortholog is 100%.

Group of orthologs #250. Best score 74 bits
Score difference with first non-orthologous sequence - S.stipitis:74 T.yellowstonii:74

A3LQJ1              	100.00%		B5YG24              	100.00%
Bootstrap support for A3LQJ1 as seed ortholog is 100%.
Bootstrap support for B5YG24 as seed ortholog is 100%.

Group of orthologs #251. Best score 72 bits
Score difference with first non-orthologous sequence - S.stipitis:72 T.yellowstonii:72

A3LWS8              	100.00%		B5YKV0              	100.00%
A3LZB1              	14.99%		
Bootstrap support for A3LWS8 as seed ortholog is 100%.
Bootstrap support for B5YKV0 as seed ortholog is 100%.

Group of orthologs #252. Best score 72 bits
Score difference with first non-orthologous sequence - S.stipitis:72 T.yellowstonii:72

A3LZ83              	100.00%		B5YKV4              	100.00%
                    	       		B5YHC4              	9.53%
Bootstrap support for A3LZ83 as seed ortholog is 100%.
Bootstrap support for B5YKV4 as seed ortholog is 100%.

Group of orthologs #253. Best score 72 bits
Score difference with first non-orthologous sequence - S.stipitis:23 T.yellowstonii:72

A3LSJ1              	100.00%		B5YG43              	100.00%
Bootstrap support for A3LSJ1 as seed ortholog is 89%.
Bootstrap support for B5YG43 as seed ortholog is 100%.

Group of orthologs #254. Best score 72 bits
Score difference with first non-orthologous sequence - S.stipitis:72 T.yellowstonii:72

A3M0D0              	100.00%		B5YHV2              	100.00%
Bootstrap support for A3M0D0 as seed ortholog is 100%.
Bootstrap support for B5YHV2 as seed ortholog is 100%.

Group of orthologs #255. Best score 71 bits
Score difference with first non-orthologous sequence - S.stipitis:71 T.yellowstonii:71

A3GF50              	100.00%		B5YHY0              	100.00%
A3LP07              	32.72%		
A3LXC5              	32.44%		
A3M0C2              	30.76%		
A3LZ03              	24.02%		
A3LRI5              	22.19%		
A3LXT3              	21.77%		
A3LNZ4              	11.52%		
Bootstrap support for A3GF50 as seed ortholog is 100%.
Bootstrap support for B5YHY0 as seed ortholog is 100%.

Group of orthologs #256. Best score 71 bits
Score difference with first non-orthologous sequence - S.stipitis:71 T.yellowstonii:71

A3LWR6              	100.00%		B5YJJ4              	100.00%
A3LWS7              	26.48%		
Bootstrap support for A3LWR6 as seed ortholog is 100%.
Bootstrap support for B5YJJ4 as seed ortholog is 100%.

Group of orthologs #257. Best score 71 bits
Score difference with first non-orthologous sequence - S.stipitis:71 T.yellowstonii:71

A3LPT0              	100.00%		B5YJH1              	100.00%
Bootstrap support for A3LPT0 as seed ortholog is 100%.
Bootstrap support for B5YJH1 as seed ortholog is 100%.

Group of orthologs #258. Best score 71 bits
Score difference with first non-orthologous sequence - S.stipitis:71 T.yellowstonii:71

A3LWP2              	100.00%		B5YJ33              	100.00%
Bootstrap support for A3LWP2 as seed ortholog is 100%.
Bootstrap support for B5YJ33 as seed ortholog is 100%.

Group of orthologs #259. Best score 70 bits
Score difference with first non-orthologous sequence - S.stipitis:70 T.yellowstonii:70

A3GG87              	100.00%		B5YH84              	100.00%
Bootstrap support for A3GG87 as seed ortholog is 100%.
Bootstrap support for B5YH84 as seed ortholog is 100%.

Group of orthologs #260. Best score 70 bits
Score difference with first non-orthologous sequence - S.stipitis:70 T.yellowstonii:70

A3LWF3              	100.00%		B5YFM5              	100.00%
Bootstrap support for A3LWF3 as seed ortholog is 100%.
Bootstrap support for B5YFM5 as seed ortholog is 100%.

Group of orthologs #261. Best score 70 bits
Score difference with first non-orthologous sequence - S.stipitis:70 T.yellowstonii:70

A3LUV9              	100.00%		B5YKU8              	100.00%
Bootstrap support for A3LUV9 as seed ortholog is 100%.
Bootstrap support for B5YKU8 as seed ortholog is 100%.

Group of orthologs #262. Best score 69 bits
Score difference with first non-orthologous sequence - S.stipitis:69 T.yellowstonii:69

A3LY56              	100.00%		B5YHA3              	100.00%
A3LU23              	16.23%		
A3LQC6              	15.19%		
Bootstrap support for A3LY56 as seed ortholog is 100%.
Bootstrap support for B5YHA3 as seed ortholog is 100%.

Group of orthologs #263. Best score 69 bits
Score difference with first non-orthologous sequence - S.stipitis:69 T.yellowstonii:69

A3LUJ2              	100.00%		B5YHX3              	100.00%
Bootstrap support for A3LUJ2 as seed ortholog is 100%.
Bootstrap support for B5YHX3 as seed ortholog is 100%.

Group of orthologs #264. Best score 68 bits
Score difference with first non-orthologous sequence - S.stipitis:68 T.yellowstonii:68

A3M0N6              	100.00%		B5YKQ3              	100.00%
A3GFH2              	65.11%		
Bootstrap support for A3M0N6 as seed ortholog is 100%.
Bootstrap support for B5YKQ3 as seed ortholog is 100%.

Group of orthologs #265. Best score 67 bits
Score difference with first non-orthologous sequence - S.stipitis:12 T.yellowstonii:67

A3GH73              	100.00%		B5YGW2              	100.00%
A3LS56              	17.59%		
A3LN43              	15.28%		
Bootstrap support for A3GH73 as seed ortholog is 42%.
Alternative seed ortholog is A3LPQ4 (12 bits away from this cluster)
Bootstrap support for B5YGW2 as seed ortholog is 100%.

Group of orthologs #266. Best score 67 bits
Score difference with first non-orthologous sequence - S.stipitis:5 T.yellowstonii:67

A3GFD4              	100.00%		B5YIN8              	100.00%
Bootstrap support for A3GFD4 as seed ortholog is 54%.
Alternative seed ortholog is A3LN94 (5 bits away from this cluster)
Bootstrap support for B5YIN8 as seed ortholog is 100%.

Group of orthologs #267. Best score 66 bits
Score difference with first non-orthologous sequence - S.stipitis:66 T.yellowstonii:66

A3GEZ1              	100.00%		B5YKE9              	100.00%
A3LPC5              	33.45%		
Bootstrap support for A3GEZ1 as seed ortholog is 100%.
Bootstrap support for B5YKE9 as seed ortholog is 100%.

Group of orthologs #268. Best score 64 bits
Score difference with first non-orthologous sequence - S.stipitis:64 T.yellowstonii:64

A3LUI4              	100.00%		B5YJU9              	100.00%
Bootstrap support for A3LUI4 as seed ortholog is 100%.
Bootstrap support for B5YJU9 as seed ortholog is 100%.

Group of orthologs #269. Best score 64 bits
Score difference with first non-orthologous sequence - S.stipitis:64 T.yellowstonii:64

A3LWQ7              	100.00%		B5YIM6              	100.00%
Bootstrap support for A3LWQ7 as seed ortholog is 100%.
Bootstrap support for B5YIM6 as seed ortholog is 100%.

Group of orthologs #270. Best score 64 bits
Score difference with first non-orthologous sequence - S.stipitis:64 T.yellowstonii:64

A3M037              	100.00%		B5YGY6              	100.00%
Bootstrap support for A3M037 as seed ortholog is 100%.
Bootstrap support for B5YGY6 as seed ortholog is 100%.

Group of orthologs #271. Best score 64 bits
Score difference with first non-orthologous sequence - S.stipitis:20 T.yellowstonii:64

A3M091              	100.00%		B5YIQ8              	100.00%
Bootstrap support for A3M091 as seed ortholog is 73%.
Alternative seed ortholog is A3GHC5 (20 bits away from this cluster)
Bootstrap support for B5YIQ8 as seed ortholog is 100%.

Group of orthologs #272. Best score 63 bits
Score difference with first non-orthologous sequence - S.stipitis:18 T.yellowstonii:63

A3LW23              	100.00%		B5YGS4              	100.00%
                    	       		B5YGS1              	21.86%
Bootstrap support for A3LW23 as seed ortholog is 67%.
Alternative seed ortholog is A3LRL7 (18 bits away from this cluster)
Bootstrap support for B5YGS4 as seed ortholog is 100%.

Group of orthologs #273. Best score 63 bits
Score difference with first non-orthologous sequence - S.stipitis:63 T.yellowstonii:63

A3LMT6              	100.00%		B5YG40              	100.00%
Bootstrap support for A3LMT6 as seed ortholog is 100%.
Bootstrap support for B5YG40 as seed ortholog is 100%.

Group of orthologs #274. Best score 63 bits
Score difference with first non-orthologous sequence - S.stipitis:1 T.yellowstonii:63

A3LQL6              	100.00%		B5YGJ8              	100.00%
Bootstrap support for A3LQL6 as seed ortholog is 52%.
Alternative seed ortholog is A3LZF3 (1 bits away from this cluster)
Bootstrap support for B5YGJ8 as seed ortholog is 100%.

Group of orthologs #275. Best score 63 bits
Score difference with first non-orthologous sequence - S.stipitis:63 T.yellowstonii:63

A3LW16              	100.00%		B5YGC7              	100.00%
Bootstrap support for A3LW16 as seed ortholog is 100%.
Bootstrap support for B5YGC7 as seed ortholog is 100%.

Group of orthologs #276. Best score 63 bits
Score difference with first non-orthologous sequence - S.stipitis:5 T.yellowstonii:63

A3M0F8              	100.00%		B5YG58              	100.00%
Bootstrap support for A3M0F8 as seed ortholog is 68%.
Alternative seed ortholog is A3LYW2 (5 bits away from this cluster)
Bootstrap support for B5YG58 as seed ortholog is 100%.

Group of orthologs #277. Best score 62 bits
Score difference with first non-orthologous sequence - S.stipitis:62 T.yellowstonii:62

A3LQD1              	100.00%		B5YG83              	100.00%
                    	       		B5YHF1              	24.93%
                    	       		B5YG10              	21.18%
                    	       		B5YLD3              	16.62%
                    	       		B5YKF2              	15.82%
                    	       		B5YFL8              	15.01%
                    	       		B5YGJ1              	15.01%
                    	       		B5YGX1              	14.75%
                    	       		B5YGS0              	13.14%
                    	       		B5YH56              	11.26%
                    	       		B5YHJ7              	11.26%
                    	       		B5YI15              	10.72%
                    	       		B5YI82              	10.46%
                    	       		B5YK32              	9.12%
                    	       		B5YK42              	7.51%
                    	       		B5YK41              	6.70%
                    	       		B5YH74              	6.43%
                    	       		B5YKY9              	6.43%
                    	       		B5YKL9              	6.17%
Bootstrap support for A3LQD1 as seed ortholog is 100%.
Bootstrap support for B5YG83 as seed ortholog is 100%.

Group of orthologs #278. Best score 62 bits
Score difference with first non-orthologous sequence - S.stipitis:62 T.yellowstonii:62

A3GF86              	100.00%		B5YHQ6              	100.00%
A3LT66              	20.67%		
Bootstrap support for A3GF86 as seed ortholog is 100%.
Bootstrap support for B5YHQ6 as seed ortholog is 100%.

Group of orthologs #279. Best score 62 bits
Score difference with first non-orthologous sequence - S.stipitis:62 T.yellowstonii:62

A3LNB2              	100.00%		B5YK81              	100.00%
Bootstrap support for A3LNB2 as seed ortholog is 100%.
Bootstrap support for B5YK81 as seed ortholog is 100%.

Group of orthologs #280. Best score 61 bits
Score difference with first non-orthologous sequence - S.stipitis:61 T.yellowstonii:61

A3GFR3              	100.00%		B5YHD2              	100.00%
A3LUI7              	100.00%		
Bootstrap support for A3GFR3 as seed ortholog is 100%.
Bootstrap support for A3LUI7 as seed ortholog is 100%.
Bootstrap support for B5YHD2 as seed ortholog is 100%.

Group of orthologs #281. Best score 61 bits
Score difference with first non-orthologous sequence - S.stipitis:61 T.yellowstonii:61

A3GI07              	100.00%		B5YFR2              	100.00%
Bootstrap support for A3GI07 as seed ortholog is 100%.
Bootstrap support for B5YFR2 as seed ortholog is 100%.

Group of orthologs #282. Best score 61 bits
Score difference with first non-orthologous sequence - S.stipitis:61 T.yellowstonii:61

A3LQ32              	100.00%		B5YLA3              	100.00%
Bootstrap support for A3LQ32 as seed ortholog is 100%.
Bootstrap support for B5YLA3 as seed ortholog is 100%.

Group of orthologs #283. Best score 61 bits
Score difference with first non-orthologous sequence - S.stipitis:61 T.yellowstonii:61

A3LX39              	100.00%		B5YGH8              	100.00%
Bootstrap support for A3LX39 as seed ortholog is 100%.
Bootstrap support for B5YGH8 as seed ortholog is 100%.

Group of orthologs #284. Best score 59 bits
Score difference with first non-orthologous sequence - S.stipitis:59 T.yellowstonii:59

A3M0C4              	100.00%		B5YIH2              	100.00%
A3LTZ3              	17.90%		
Bootstrap support for A3M0C4 as seed ortholog is 100%.
Bootstrap support for B5YIH2 as seed ortholog is 100%.

Group of orthologs #285. Best score 59 bits
Score difference with first non-orthologous sequence - S.stipitis:59 T.yellowstonii:59

A3GGM6              	100.00%		B5YFY8              	100.00%
Bootstrap support for A3GGM6 as seed ortholog is 100%.
Bootstrap support for B5YFY8 as seed ortholog is 100%.

Group of orthologs #286. Best score 59 bits
Score difference with first non-orthologous sequence - S.stipitis:59 T.yellowstonii:15

A3GGS7              	100.00%		B5YJN4              	100.00%
Bootstrap support for A3GGS7 as seed ortholog is 100%.
Bootstrap support for B5YJN4 as seed ortholog is 73%.
Alternative seed ortholog is B5YHG1 (15 bits away from this cluster)

Group of orthologs #287. Best score 59 bits
Score difference with first non-orthologous sequence - S.stipitis:59 T.yellowstonii:59

A3GIC9              	100.00%		B5YLB8              	100.00%
Bootstrap support for A3GIC9 as seed ortholog is 100%.
Bootstrap support for B5YLB8 as seed ortholog is 100%.

Group of orthologs #288. Best score 59 bits
Score difference with first non-orthologous sequence - S.stipitis:59 T.yellowstonii:59

A3LWG1              	100.00%		B5YK94              	100.00%
Bootstrap support for A3LWG1 as seed ortholog is 100%.
Bootstrap support for B5YK94 as seed ortholog is 100%.

Group of orthologs #289. Best score 57 bits
Score difference with first non-orthologous sequence - S.stipitis:57 T.yellowstonii:57

A3LT09              	100.00%		B5YID5              	100.00%
                    	       		B5YIM1              	12.03%
Bootstrap support for A3LT09 as seed ortholog is 100%.
Bootstrap support for B5YID5 as seed ortholog is 100%.

Group of orthologs #290. Best score 57 bits
Score difference with first non-orthologous sequence - S.stipitis:57 T.yellowstonii:57

A3GFV0              	100.00%		B5YJF7              	100.00%
Bootstrap support for A3GFV0 as seed ortholog is 100%.
Bootstrap support for B5YJF7 as seed ortholog is 100%.

Group of orthologs #291. Best score 57 bits
Score difference with first non-orthologous sequence - S.stipitis:57 T.yellowstonii:57

A3LZ30              	100.00%		B5YG48              	100.00%
Bootstrap support for A3LZ30 as seed ortholog is 100%.
Bootstrap support for B5YG48 as seed ortholog is 100%.

Group of orthologs #292. Best score 57 bits
Score difference with first non-orthologous sequence - S.stipitis:57 T.yellowstonii:57

A3LZF9              	100.00%		B5YLC9              	100.00%
Bootstrap support for A3LZF9 as seed ortholog is 100%.
Bootstrap support for B5YLC9 as seed ortholog is 100%.

Group of orthologs #293. Best score 56 bits
Score difference with first non-orthologous sequence - S.stipitis:56 T.yellowstonii:56

A3LX03              	100.00%		B5YGE4              	100.00%
Bootstrap support for A3LX03 as seed ortholog is 100%.
Bootstrap support for B5YGE4 as seed ortholog is 100%.

Group of orthologs #294. Best score 55 bits
Score difference with first non-orthologous sequence - S.stipitis:55 T.yellowstonii:55

A3GHA3              	100.00%		B5YGY5              	100.00%
Bootstrap support for A3GHA3 as seed ortholog is 100%.
Bootstrap support for B5YGY5 as seed ortholog is 100%.

Group of orthologs #295. Best score 53 bits
Score difference with first non-orthologous sequence - S.stipitis:53 T.yellowstonii:53

A3LZ60              	100.00%		B5YJ40              	100.00%
Bootstrap support for A3LZ60 as seed ortholog is 100%.
Bootstrap support for B5YJ40 as seed ortholog is 100%.

Group of orthologs #296. Best score 52 bits
Score difference with first non-orthologous sequence - S.stipitis:52 T.yellowstonii:52

A3GGJ6              	100.00%		B5YGI6              	100.00%
Bootstrap support for A3GGJ6 as seed ortholog is 100%.
Bootstrap support for B5YGI6 as seed ortholog is 100%.

Group of orthologs #297. Best score 50 bits
Score difference with first non-orthologous sequence - S.stipitis:50 T.yellowstonii:50

A3LTP3              	100.00%		B5YJH0              	100.00%
Bootstrap support for A3LTP3 as seed ortholog is 100%.
Bootstrap support for B5YJH0 as seed ortholog is 100%.

Group of orthologs #298. Best score 49 bits
Score difference with first non-orthologous sequence - S.stipitis:49 T.yellowstonii:49

A3GH11              	100.00%		B5YK67              	100.00%
Bootstrap support for A3GH11 as seed ortholog is 100%.
Bootstrap support for B5YK67 as seed ortholog is 100%.

Group of orthologs #299. Best score 49 bits
Score difference with first non-orthologous sequence - S.stipitis:49 T.yellowstonii:49

A3LNI0              	100.00%		B5YI21              	100.00%
Bootstrap support for A3LNI0 as seed ortholog is 100%.
Bootstrap support for B5YI21 as seed ortholog is 100%.

Group of orthologs #300. Best score 49 bits
Score difference with first non-orthologous sequence - S.stipitis:5 T.yellowstonii:49

A3LQJ0              	100.00%		B5YG33              	100.00%
Bootstrap support for A3LQJ0 as seed ortholog is 56%.
Alternative seed ortholog is A3LUM0 (5 bits away from this cluster)
Bootstrap support for B5YG33 as seed ortholog is 100%.

Group of orthologs #301. Best score 48 bits
Score difference with first non-orthologous sequence - S.stipitis:48 T.yellowstonii:48

A3LWU7              	100.00%		B5YG98              	100.00%
A3LWU6              	78.95%		
Bootstrap support for A3LWU7 as seed ortholog is 100%.
Bootstrap support for B5YG98 as seed ortholog is 100%.

Group of orthologs #302. Best score 48 bits
Score difference with first non-orthologous sequence - S.stipitis:48 T.yellowstonii:48

A3LQ09              	100.00%		B5YJT6              	100.00%
Bootstrap support for A3LQ09 as seed ortholog is 100%.
Bootstrap support for B5YJT6 as seed ortholog is 100%.

Group of orthologs #303. Best score 48 bits
Score difference with first non-orthologous sequence - S.stipitis:48 T.yellowstonii:48

A3LTC4              	100.00%		B5YKP9              	100.00%
Bootstrap support for A3LTC4 as seed ortholog is 100%.
Bootstrap support for B5YKP9 as seed ortholog is 100%.

Group of orthologs #304. Best score 47 bits
Score difference with first non-orthologous sequence - S.stipitis:47 T.yellowstonii:47

A3GI61              	100.00%		B5YHI2              	100.00%
Bootstrap support for A3GI61 as seed ortholog is 100%.
Bootstrap support for B5YHI2 as seed ortholog is 100%.

Group of orthologs #305. Best score 47 bits
Score difference with first non-orthologous sequence - S.stipitis:47 T.yellowstonii:47

P49434              	100.00%		B5YI95              	100.00%
Bootstrap support for P49434 as seed ortholog is 100%.
Bootstrap support for B5YI95 as seed ortholog is 100%.

Group of orthologs #306. Best score 46 bits
Score difference with first non-orthologous sequence - S.stipitis:46 T.yellowstonii:46

A3LP87              	100.00%		B5YKZ7              	100.00%
A3LRW2              	100.00%		B5YIV2              	100.00%
A3LQW7              	28.40%		
A3LS22              	26.90%		
A3LQ01              	22.76%		
A3LSN3              	22.60%		
A3LQ55              	19.84%		
A3LNL1              	18.73%		
A3LNR6              	18.43%		
A3LWX3              	18.43%		
A3GFI4              	17.69%		
A3GFV3              	17.44%		
A3LZT3              	16.58%		
A3LX02              	15.23%		
A3LST5              	14.99%		
A3LWH3              	13.90%		
A3GH91              	13.39%		
A3GG51              	12.08%		
A3GGE9              	11.58%		
A3LSJ2              	10.88%		
A3LV40              	10.44%		
A3LQ99              	10.07%		
Bootstrap support for A3LP87 as seed ortholog is 100%.
Bootstrap support for A3LRW2 as seed ortholog is 100%.
Bootstrap support for B5YKZ7 as seed ortholog is 100%.
Bootstrap support for B5YIV2 as seed ortholog is 100%.

Group of orthologs #307. Best score 45 bits
Score difference with first non-orthologous sequence - S.stipitis:45 T.yellowstonii:45

A3GG95              	100.00%		B5YJL0              	100.00%
Bootstrap support for A3GG95 as seed ortholog is 100%.
Bootstrap support for B5YJL0 as seed ortholog is 100%.

Group of orthologs #308. Best score 45 bits
Score difference with first non-orthologous sequence - S.stipitis:45 T.yellowstonii:45

A3LP94              	100.00%		B5YL76              	100.00%
Bootstrap support for A3LP94 as seed ortholog is 100%.
Bootstrap support for B5YL76 as seed ortholog is 100%.

Group of orthologs #309. Best score 45 bits
Score difference with first non-orthologous sequence - S.stipitis:45 T.yellowstonii:45

A3LW30              	100.00%		B5YKS8              	100.00%
Bootstrap support for A3LW30 as seed ortholog is 100%.
Bootstrap support for B5YKS8 as seed ortholog is 100%.

Group of orthologs #310. Best score 42 bits
Score difference with first non-orthologous sequence - S.stipitis:42 T.yellowstonii:42

A3LSC6              	100.00%		B5YK98              	100.00%
Bootstrap support for A3LSC6 as seed ortholog is 100%.
Bootstrap support for B5YK98 as seed ortholog is 100%.

Group of orthologs #311. Best score 41 bits
Score difference with first non-orthologous sequence - S.stipitis:41 T.yellowstonii:41

A3LST9              	100.00%		B5YKM8              	100.00%
A3LZ17              	50.00%		
A3LZ45              	38.75%		
Bootstrap support for A3LST9 as seed ortholog is 100%.
Bootstrap support for B5YKM8 as seed ortholog is 100%.

Group of orthologs #312. Best score 41 bits
Score difference with first non-orthologous sequence - S.stipitis:41 T.yellowstonii:41

A3LZZ5              	100.00%		B5YHG2              	100.00%
Bootstrap support for A3LZZ5 as seed ortholog is 100%.
Bootstrap support for B5YHG2 as seed ortholog is 100%.

Group of orthologs #313. Best score 40 bits
Score difference with first non-orthologous sequence - S.stipitis:40 T.yellowstonii:40

A3GFD9              	100.00%		B5YIH1              	100.00%
Bootstrap support for A3GFD9 as seed ortholog is 100%.
Bootstrap support for B5YIH1 as seed ortholog is 100%.