###################################
1134 groups of orthologs
1348 in-paralogs from C.reinhardtii
1162 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3475 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3475 P.knowlesi:3475

A8HPL0              	100.00%		B3KZY4              	100.00%
Bootstrap support for A8HPL0 as seed ortholog is 100%.
Bootstrap support for B3KZY4 as seed ortholog is 100%.

Group of orthologs #2. Best score 2071 bits
Score difference with first non-orthologous sequence - C.reinhardtii:910 P.knowlesi:534

A8J1M5              	100.00%		B3L1Z2              	100.00%
A8J336              	7.06%		
Bootstrap support for A8J1M5 as seed ortholog is 100%.
Bootstrap support for B3L1Z2 as seed ortholog is 99%.

Group of orthologs #3. Best score 1756 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.knowlesi:668

A8JHU7              	100.00%		B3L363              	100.00%
A8IUF0              	9.92%		
A8J063              	5.20%		
A8I5C3              	5.02%		
Bootstrap support for A8JHU7 as seed ortholog is 75%.
Bootstrap support for B3L363 as seed ortholog is 100%.

Group of orthologs #4. Best score 1662 bits
Score difference with first non-orthologous sequence - C.reinhardtii:737 P.knowlesi:1662

A8IWA6              	100.00%		B3LBE1              	100.00%
Bootstrap support for A8IWA6 as seed ortholog is 100%.
Bootstrap support for B3LBE1 as seed ortholog is 100%.

Group of orthologs #5. Best score 1451 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1011 P.knowlesi:672

A8IRZ2              	100.00%		B3L428              	100.00%
Bootstrap support for A8IRZ2 as seed ortholog is 100%.
Bootstrap support for B3L428 as seed ortholog is 100%.

Group of orthologs #6. Best score 1394 bits
Score difference with first non-orthologous sequence - C.reinhardtii:471 P.knowlesi:571

Q9SMH5              	100.00%		B3KZT8              	100.00%
Bootstrap support for Q9SMH5 as seed ortholog is 99%.
Bootstrap support for B3KZT8 as seed ortholog is 99%.

Group of orthologs #7. Best score 1137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1137 P.knowlesi:439

A8JI25              	100.00%		B3L1P3              	100.00%
Bootstrap support for A8JI25 as seed ortholog is 100%.
Bootstrap support for B3L1P3 as seed ortholog is 100%.

Group of orthologs #8. Best score 1118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1118 P.knowlesi:1118

A8IY03              	100.00%		B3LB54              	100.00%
Bootstrap support for A8IY03 as seed ortholog is 100%.
Bootstrap support for B3LB54 as seed ortholog is 100%.

Group of orthologs #9. Best score 1059 bits
Score difference with first non-orthologous sequence - C.reinhardtii:640 P.knowlesi:715

A8HW56              	100.00%		B3L7L4              	100.00%
Bootstrap support for A8HW56 as seed ortholog is 100%.
Bootstrap support for B3L7L4 as seed ortholog is 100%.

Group of orthologs #10. Best score 1055 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1055 P.knowlesi:1055

A8JD08              	100.00%		B3LBF9              	100.00%
Bootstrap support for A8JD08 as seed ortholog is 100%.
Bootstrap support for B3LBF9 as seed ortholog is 100%.

Group of orthologs #11. Best score 1046 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1046 P.knowlesi:1046

A8JDR3              	100.00%		B3LBC1              	100.00%
Bootstrap support for A8JDR3 as seed ortholog is 100%.
Bootstrap support for B3LBC1 as seed ortholog is 100%.

Group of orthologs #12. Best score 1040 bits
Score difference with first non-orthologous sequence - C.reinhardtii:482 P.knowlesi:662

A8JHX9              	100.00%		B3L9Q6              	100.00%
Bootstrap support for A8JHX9 as seed ortholog is 100%.
Bootstrap support for B3L9Q6 as seed ortholog is 100%.

Group of orthologs #13. Best score 969 bits
Score difference with first non-orthologous sequence - C.reinhardtii:969 P.knowlesi:969

A8J9F3              	100.00%		B3L8Q4              	100.00%
Bootstrap support for A8J9F3 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #14. Best score 930 bits
Score difference with first non-orthologous sequence - C.reinhardtii:930 P.knowlesi:930

A8I9Z6              	100.00%		B3L0J5              	100.00%
Bootstrap support for A8I9Z6 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #15. Best score 908 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.knowlesi:330

A8I972              	100.00%		B3L1E0              	100.00%
Bootstrap support for A8I972 as seed ortholog is 99%.
Bootstrap support for B3L1E0 as seed ortholog is 100%.

Group of orthologs #16. Best score 894 bits
Score difference with first non-orthologous sequence - C.reinhardtii:352 P.knowlesi:755

A8JEU4              	100.00%		B3L1A4              	100.00%
Bootstrap support for A8JEU4 as seed ortholog is 100%.
Bootstrap support for B3L1A4 as seed ortholog is 100%.

Group of orthologs #17. Best score 878 bits
Score difference with first non-orthologous sequence - C.reinhardtii:491 P.knowlesi:448

A8I542              	100.00%		B3KZL1              	100.00%
Bootstrap support for A8I542 as seed ortholog is 100%.
Bootstrap support for B3KZL1 as seed ortholog is 100%.

Group of orthologs #18. Best score 853 bits
Score difference with first non-orthologous sequence - C.reinhardtii:853 P.knowlesi:853

Q540H1              	100.00%		B3L1P1              	100.00%
                    	       		B3L347              	65.67%
Bootstrap support for Q540H1 as seed ortholog is 100%.
Bootstrap support for B3L1P1 as seed ortholog is 100%.

Group of orthologs #19. Best score 846 bits
Score difference with first non-orthologous sequence - C.reinhardtii:846 P.knowlesi:846

A8HPJ0              	100.00%		B3L1S9              	100.00%
Bootstrap support for A8HPJ0 as seed ortholog is 100%.
Bootstrap support for B3L1S9 as seed ortholog is 100%.

Group of orthologs #20. Best score 834 bits
Score difference with first non-orthologous sequence - C.reinhardtii:748 P.knowlesi:834

A8IXZ0              	100.00%		B3L3M0              	100.00%
Bootstrap support for A8IXZ0 as seed ortholog is 100%.
Bootstrap support for B3L3M0 as seed ortholog is 100%.

Group of orthologs #21. Best score 819 bits
Score difference with first non-orthologous sequence - C.reinhardtii:275 P.knowlesi:616

A8I7T8              	100.00%		B3L2J7              	100.00%
A8I7S9              	71.85%		
Bootstrap support for A8I7T8 as seed ortholog is 100%.
Bootstrap support for B3L2J7 as seed ortholog is 100%.

Group of orthologs #22. Best score 796 bits
Score difference with first non-orthologous sequence - C.reinhardtii:796 P.knowlesi:796

A8I9D7              	100.00%		B3L3I5              	100.00%
Bootstrap support for A8I9D7 as seed ortholog is 100%.
Bootstrap support for B3L3I5 as seed ortholog is 100%.

Group of orthologs #23. Best score 795 bits
Score difference with first non-orthologous sequence - C.reinhardtii:538 P.knowlesi:795

A8HP06              	100.00%		B3L2B2              	100.00%
Bootstrap support for A8HP06 as seed ortholog is 100%.
Bootstrap support for B3L2B2 as seed ortholog is 100%.

Group of orthologs #24. Best score 793 bits
Score difference with first non-orthologous sequence - C.reinhardtii:591 P.knowlesi:793

A8JEV6              	100.00%		B3LCZ1              	100.00%
Bootstrap support for A8JEV6 as seed ortholog is 100%.
Bootstrap support for B3LCZ1 as seed ortholog is 100%.

Group of orthologs #25. Best score 785 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.knowlesi:785

A8IZU0              	100.00%		B3L5E9              	100.00%
Bootstrap support for A8IZU0 as seed ortholog is 99%.
Bootstrap support for B3L5E9 as seed ortholog is 100%.

Group of orthologs #26. Best score 735 bits
Score difference with first non-orthologous sequence - C.reinhardtii:593 P.knowlesi:735

A8I164              	100.00%		B3LBT4              	100.00%
Bootstrap support for A8I164 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #27. Best score 733 bits
Score difference with first non-orthologous sequence - C.reinhardtii:733 P.knowlesi:733

A8IVG0              	100.00%		B3L184              	100.00%
Bootstrap support for A8IVG0 as seed ortholog is 100%.
Bootstrap support for B3L184 as seed ortholog is 100%.

Group of orthologs #28. Best score 719 bits
Score difference with first non-orthologous sequence - C.reinhardtii:719 P.knowlesi:719

A8HRR9              	100.00%		B3L7Y9              	100.00%
Bootstrap support for A8HRR9 as seed ortholog is 100%.
Bootstrap support for B3L7Y9 as seed ortholog is 100%.

Group of orthologs #29. Best score 708 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:708

A8IQU3              	100.00%		B3LD12              	100.00%
Bootstrap support for A8IQU3 as seed ortholog is 99%.
Bootstrap support for B3LD12 as seed ortholog is 100%.

Group of orthologs #30. Best score 700 bits
Score difference with first non-orthologous sequence - C.reinhardtii:700 P.knowlesi:700

A8J6S7              	100.00%		B3L997              	100.00%
Bootstrap support for A8J6S7 as seed ortholog is 100%.
Bootstrap support for B3L997 as seed ortholog is 100%.

Group of orthologs #31. Best score 686 bits
Score difference with first non-orthologous sequence - C.reinhardtii:585 P.knowlesi:686

A8IA45              	100.00%		B3KZZ1              	100.00%
Bootstrap support for A8IA45 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #32. Best score 677 bits
Score difference with first non-orthologous sequence - C.reinhardtii:677 P.knowlesi:677

A8JGS8              	100.00%		B3L369              	100.00%
Bootstrap support for A8JGS8 as seed ortholog is 100%.
Bootstrap support for B3L369 as seed ortholog is 100%.

Group of orthologs #33. Best score 664 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.knowlesi:196

A8JGT9              	100.00%		B3L842              	100.00%
Bootstrap support for A8JGT9 as seed ortholog is 99%.
Bootstrap support for B3L842 as seed ortholog is 99%.

Group of orthologs #34. Best score 658 bits
Score difference with first non-orthologous sequence - C.reinhardtii:658 P.knowlesi:658

A8I4S9              	100.00%		B3LCI5              	100.00%
Bootstrap support for A8I4S9 as seed ortholog is 100%.
Bootstrap support for B3LCI5 as seed ortholog is 100%.

Group of orthologs #35. Best score 654 bits
Score difference with first non-orthologous sequence - C.reinhardtii:654 P.knowlesi:654

A8IUN1              	100.00%		B3L4J0              	100.00%
Bootstrap support for A8IUN1 as seed ortholog is 100%.
Bootstrap support for B3L4J0 as seed ortholog is 100%.

Group of orthologs #36. Best score 653 bits
Score difference with first non-orthologous sequence - C.reinhardtii:450 P.knowlesi:270

A8IHB3              	100.00%		B3L3L7              	100.00%
Bootstrap support for A8IHB3 as seed ortholog is 100%.
Bootstrap support for B3L3L7 as seed ortholog is 100%.

Group of orthologs #37. Best score 653 bits
Score difference with first non-orthologous sequence - C.reinhardtii:498 P.knowlesi:364

A8IV67              	100.00%		B3LBS7              	100.00%
Bootstrap support for A8IV67 as seed ortholog is 100%.
Bootstrap support for B3LBS7 as seed ortholog is 100%.

Group of orthologs #38. Best score 649 bits
Score difference with first non-orthologous sequence - C.reinhardtii:649 P.knowlesi:536

A8JC00              	100.00%		B3L4K9              	100.00%
Bootstrap support for A8JC00 as seed ortholog is 100%.
Bootstrap support for B3L4K9 as seed ortholog is 100%.

Group of orthologs #39. Best score 648 bits
Score difference with first non-orthologous sequence - C.reinhardtii:648 P.knowlesi:648

A8IEL6              	100.00%		B3L8D7              	100.00%
Bootstrap support for A8IEL6 as seed ortholog is 100%.
Bootstrap support for B3L8D7 as seed ortholog is 100%.

Group of orthologs #40. Best score 646 bits
Score difference with first non-orthologous sequence - C.reinhardtii:646 P.knowlesi:646

A8JH39              	100.00%		B3L165              	100.00%
Bootstrap support for A8JH39 as seed ortholog is 100%.
Bootstrap support for B3L165 as seed ortholog is 100%.

Group of orthologs #41. Best score 645 bits
Score difference with first non-orthologous sequence - C.reinhardtii:321 P.knowlesi:227

A8IK98              	100.00%		B3L4J4              	100.00%
Bootstrap support for A8IK98 as seed ortholog is 100%.
Bootstrap support for B3L4J4 as seed ortholog is 100%.

Group of orthologs #42. Best score 644 bits
Score difference with first non-orthologous sequence - C.reinhardtii:644 P.knowlesi:644

A8I232              	100.00%		B3LAR0              	100.00%
Bootstrap support for A8I232 as seed ortholog is 100%.
Bootstrap support for B3LAR0 as seed ortholog is 100%.

Group of orthologs #43. Best score 644 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.knowlesi:40

A8JAV1              	100.00%		B3LDA3              	100.00%
Bootstrap support for A8JAV1 as seed ortholog is 100%.
Bootstrap support for B3LDA3 as seed ortholog is 94%.

Group of orthologs #44. Best score 643 bits
Score difference with first non-orthologous sequence - C.reinhardtii:643 P.knowlesi:643

A8IAC7              	100.00%		B3L7Y7              	100.00%
Bootstrap support for A8IAC7 as seed ortholog is 100%.
Bootstrap support for B3L7Y7 as seed ortholog is 100%.

Group of orthologs #45. Best score 643 bits
Score difference with first non-orthologous sequence - C.reinhardtii:643 P.knowlesi:296

A8II71              	100.00%		B3L6Z9              	100.00%
Bootstrap support for A8II71 as seed ortholog is 100%.
Bootstrap support for B3L6Z9 as seed ortholog is 100%.

Group of orthologs #46. Best score 633 bits
Score difference with first non-orthologous sequence - C.reinhardtii:633 P.knowlesi:633

A8J3A4              	100.00%		B3L0U2              	100.00%
Bootstrap support for A8J3A4 as seed ortholog is 100%.
Bootstrap support for B3L0U2 as seed ortholog is 100%.

Group of orthologs #47. Best score 627 bits
Score difference with first non-orthologous sequence - C.reinhardtii:543 P.knowlesi:627

A8IIP9              	100.00%		B3L5D0              	100.00%
Bootstrap support for A8IIP9 as seed ortholog is 100%.
Bootstrap support for B3L5D0 as seed ortholog is 100%.

Group of orthologs #48. Best score 626 bits
Score difference with first non-orthologous sequence - C.reinhardtii:626 P.knowlesi:203

A8J0B0              	100.00%		B3L9J7              	100.00%
Bootstrap support for A8J0B0 as seed ortholog is 100%.
Bootstrap support for B3L9J7 as seed ortholog is 99%.

Group of orthologs #49. Best score 612 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 P.knowlesi:407

A8IT25              	100.00%		B3L3Z3              	100.00%
Bootstrap support for A8IT25 as seed ortholog is 100%.
Bootstrap support for B3L3Z3 as seed ortholog is 100%.

Group of orthologs #50. Best score 611 bits
Score difference with first non-orthologous sequence - C.reinhardtii:501 P.knowlesi:611

A8JCV8              	100.00%		B3L7C9              	100.00%
A8JCQ8              	35.55%		
A8JFR9              	19.92%		
Bootstrap support for A8JCV8 as seed ortholog is 100%.
Bootstrap support for B3L7C9 as seed ortholog is 100%.

Group of orthologs #51. Best score 610 bits
Score difference with first non-orthologous sequence - C.reinhardtii:542 P.knowlesi:610

A8J7J2              	100.00%		B3L402              	100.00%
Bootstrap support for A8J7J2 as seed ortholog is 100%.
Bootstrap support for B3L402 as seed ortholog is 100%.

Group of orthologs #52. Best score 607 bits
Score difference with first non-orthologous sequence - C.reinhardtii:607 P.knowlesi:607

A8JG07              	100.00%		B3L4A4              	100.00%
Bootstrap support for A8JG07 as seed ortholog is 100%.
Bootstrap support for B3L4A4 as seed ortholog is 100%.

Group of orthologs #53. Best score 606 bits
Score difference with first non-orthologous sequence - C.reinhardtii:606 P.knowlesi:606

A8IXE0              	100.00%		B3L654              	100.00%
Bootstrap support for A8IXE0 as seed ortholog is 100%.
Bootstrap support for B3L654 as seed ortholog is 100%.

Group of orthologs #54. Best score 599 bits
Score difference with first non-orthologous sequence - C.reinhardtii:433 P.knowlesi:287

A8IIP7              	100.00%		B3L5B0              	100.00%
Bootstrap support for A8IIP7 as seed ortholog is 100%.
Bootstrap support for B3L5B0 as seed ortholog is 100%.

Group of orthologs #55. Best score 596 bits
Score difference with first non-orthologous sequence - C.reinhardtii:536 P.knowlesi:596

A8J524              	100.00%		B3L4C8              	100.00%
Bootstrap support for A8J524 as seed ortholog is 100%.
Bootstrap support for B3L4C8 as seed ortholog is 100%.

Group of orthologs #56. Best score 595 bits
Score difference with first non-orthologous sequence - C.reinhardtii:537 P.knowlesi:509

A8HQ74              	100.00%		B3L4B5              	100.00%
Bootstrap support for A8HQ74 as seed ortholog is 100%.
Bootstrap support for B3L4B5 as seed ortholog is 100%.

Group of orthologs #57. Best score 593 bits
Score difference with first non-orthologous sequence - C.reinhardtii:521 P.knowlesi:593

A8II42              	100.00%		B3LCT4              	100.00%
Bootstrap support for A8II42 as seed ortholog is 100%.
Bootstrap support for B3LCT4 as seed ortholog is 100%.

Group of orthologs #58. Best score 590 bits
Score difference with first non-orthologous sequence - C.reinhardtii:590 P.knowlesi:590

A8J0N7              	100.00%		B3L8H1              	100.00%
Bootstrap support for A8J0N7 as seed ortholog is 100%.
Bootstrap support for B3L8H1 as seed ortholog is 100%.

Group of orthologs #59. Best score 589 bits
Score difference with first non-orthologous sequence - C.reinhardtii:497 P.knowlesi:499

A8JE04              	100.00%		B3L746              	100.00%
Bootstrap support for A8JE04 as seed ortholog is 100%.
Bootstrap support for B3L746 as seed ortholog is 100%.

Group of orthologs #60. Best score 584 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 P.knowlesi:584

A8J7C8              	100.00%		B3L892              	100.00%
Bootstrap support for A8J7C8 as seed ortholog is 100%.
Bootstrap support for B3L892 as seed ortholog is 100%.

Group of orthologs #61. Best score 582 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.knowlesi:369

A8JCM3              	100.00%		B3L5Y4              	100.00%
Bootstrap support for A8JCM3 as seed ortholog is 100%.
Bootstrap support for B3L5Y4 as seed ortholog is 100%.

Group of orthologs #62. Best score 577 bits
Score difference with first non-orthologous sequence - C.reinhardtii:577 P.knowlesi:577

A8I8N8              	100.00%		B3LC00              	100.00%
Bootstrap support for A8I8N8 as seed ortholog is 100%.
Bootstrap support for B3LC00 as seed ortholog is 100%.

Group of orthologs #63. Best score 571 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.knowlesi:273

A8IR41              	100.00%		B3LBM5              	100.00%
Bootstrap support for A8IR41 as seed ortholog is 100%.
Bootstrap support for B3LBM5 as seed ortholog is 100%.

Group of orthologs #64. Best score 570 bits
Score difference with first non-orthologous sequence - C.reinhardtii:570 P.knowlesi:570

A8HYA9              	100.00%		B3L2U4              	100.00%
Bootstrap support for A8HYA9 as seed ortholog is 100%.
Bootstrap support for B3L2U4 as seed ortholog is 100%.

Group of orthologs #65. Best score 569 bits
Score difference with first non-orthologous sequence - C.reinhardtii:569 P.knowlesi:569

A8INS0              	100.00%		B3L866              	100.00%
Bootstrap support for A8INS0 as seed ortholog is 100%.
Bootstrap support for B3L866 as seed ortholog is 100%.

Group of orthologs #66. Best score 569 bits
Score difference with first non-orthologous sequence - C.reinhardtii:569 P.knowlesi:569

Q8VZZ5              	100.00%		B3L0N2              	100.00%
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.
Bootstrap support for B3L0N2 as seed ortholog is 100%.

Group of orthologs #67. Best score 566 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.knowlesi:241

A8IMK1              	100.00%		B3L3U9              	100.00%
Bootstrap support for A8IMK1 as seed ortholog is 99%.
Bootstrap support for B3L3U9 as seed ortholog is 100%.

Group of orthologs #68. Best score 566 bits
Score difference with first non-orthologous sequence - C.reinhardtii:566 P.knowlesi:566

A8IRK2              	100.00%		B3LA88              	100.00%
Bootstrap support for A8IRK2 as seed ortholog is 100%.
Bootstrap support for B3LA88 as seed ortholog is 100%.

Group of orthologs #69. Best score 563 bits
Score difference with first non-orthologous sequence - C.reinhardtii:563 P.knowlesi:67

A8J1U1              	100.00%		B3LCL1              	100.00%
A8I7T1              	10.22%		
Q66T67              	7.33%		
Bootstrap support for A8J1U1 as seed ortholog is 100%.
Bootstrap support for B3LCL1 as seed ortholog is 89%.

Group of orthologs #70. Best score 562 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:396

A8IU68              	100.00%		B3L9E5              	100.00%
Bootstrap support for A8IU68 as seed ortholog is 90%.
Bootstrap support for B3L9E5 as seed ortholog is 100%.

Group of orthologs #71. Best score 559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:559 P.knowlesi:559

A8INY3              	100.00%		B3KZB0              	100.00%
Bootstrap support for A8INY3 as seed ortholog is 100%.
Bootstrap support for B3KZB0 as seed ortholog is 100%.

Group of orthologs #72. Best score 559 bits
Score difference with first non-orthologous sequence - C.reinhardtii:559 P.knowlesi:286

A8J1C1              	100.00%		B3LCP8              	100.00%
Bootstrap support for A8J1C1 as seed ortholog is 100%.
Bootstrap support for B3LCP8 as seed ortholog is 99%.

Group of orthologs #73. Best score 553 bits
Score difference with first non-orthologous sequence - C.reinhardtii:553 P.knowlesi:553

A8I175              	100.00%		B3L4H0              	100.00%
Bootstrap support for A8I175 as seed ortholog is 100%.
Bootstrap support for B3L4H0 as seed ortholog is 100%.

Group of orthologs #74. Best score 551 bits
Score difference with first non-orthologous sequence - C.reinhardtii:551 P.knowlesi:326

A8IWA5              	100.00%		B3L682              	100.00%
Bootstrap support for A8IWA5 as seed ortholog is 100%.
Bootstrap support for B3L682 as seed ortholog is 100%.

Group of orthologs #75. Best score 550 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.knowlesi:550

A8J0R6              	100.00%		B3L6U2              	100.00%
Bootstrap support for A8J0R6 as seed ortholog is 99%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #76. Best score 548 bits
Score difference with first non-orthologous sequence - C.reinhardtii:548 P.knowlesi:548

A8JH98              	100.00%		B3L3V4              	100.00%
Bootstrap support for A8JH98 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #77. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:545 P.knowlesi:545

A8JH25              	100.00%		B3LBK2              	100.00%
Bootstrap support for A8JH25 as seed ortholog is 100%.
Bootstrap support for B3LBK2 as seed ortholog is 100%.

Group of orthologs #78. Best score 545 bits
Score difference with first non-orthologous sequence - C.reinhardtii:545 P.knowlesi:545

A8JIR0              	100.00%		B3LBP4              	100.00%
Bootstrap support for A8JIR0 as seed ortholog is 100%.
Bootstrap support for B3LBP4 as seed ortholog is 100%.

Group of orthologs #79. Best score 542 bits
Score difference with first non-orthologous sequence - C.reinhardtii:490 P.knowlesi:542

A8J9S7              	100.00%		B3L8E1              	100.00%
Bootstrap support for A8J9S7 as seed ortholog is 100%.
Bootstrap support for B3L8E1 as seed ortholog is 100%.

Group of orthologs #80. Best score 540 bits
Score difference with first non-orthologous sequence - C.reinhardtii:540 P.knowlesi:540

A8IAN1              	100.00%		B3L7U8              	100.00%
Bootstrap support for A8IAN1 as seed ortholog is 100%.
Bootstrap support for B3L7U8 as seed ortholog is 100%.

Group of orthologs #81. Best score 533 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 P.knowlesi:434

A8JI26              	100.00%		B3KZR4              	100.00%
Bootstrap support for A8JI26 as seed ortholog is 100%.
Bootstrap support for B3KZR4 as seed ortholog is 100%.

Group of orthologs #82. Best score 532 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 P.knowlesi:376

A8JBN7              	100.00%		B3L1P5              	100.00%
Bootstrap support for A8JBN7 as seed ortholog is 100%.
Bootstrap support for B3L1P5 as seed ortholog is 100%.

Group of orthologs #83. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:530 P.knowlesi:90

A8J568              	100.00%		B3L6H5              	100.00%
Bootstrap support for A8J568 as seed ortholog is 100%.
Bootstrap support for B3L6H5 as seed ortholog is 93%.

Group of orthologs #84. Best score 530 bits
Score difference with first non-orthologous sequence - C.reinhardtii:530 P.knowlesi:530

A8JC99              	100.00%		B3LBT3              	100.00%
Bootstrap support for A8JC99 as seed ortholog is 100%.
Bootstrap support for B3LBT3 as seed ortholog is 100%.

Group of orthologs #85. Best score 529 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.knowlesi:255

Q9XGU3              	100.00%		B3LAL6              	100.00%
Bootstrap support for Q9XGU3 as seed ortholog is 100%.
Bootstrap support for B3LAL6 as seed ortholog is 100%.

Group of orthologs #86. Best score 528 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.knowlesi:89

A8IHD9              	100.00%		B3L263              	100.00%
Bootstrap support for A8IHD9 as seed ortholog is 84%.
Bootstrap support for B3L263 as seed ortholog is 95%.

Group of orthologs #87. Best score 528 bits
Score difference with first non-orthologous sequence - C.reinhardtii:413 P.knowlesi:74

A8IA39              	100.00%		B3L839              	100.00%
Bootstrap support for A8IA39 as seed ortholog is 100%.
Bootstrap support for B3L839 as seed ortholog is 77%.

Group of orthologs #88. Best score 521 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 P.knowlesi:284

A8IP17              	100.00%		B3L971              	100.00%
Bootstrap support for A8IP17 as seed ortholog is 100%.
Bootstrap support for B3L971 as seed ortholog is 100%.

Group of orthologs #89. Best score 519 bits
Score difference with first non-orthologous sequence - C.reinhardtii:519 P.knowlesi:519

A8IUL6              	100.00%		B3L4Q4              	100.00%
Bootstrap support for A8IUL6 as seed ortholog is 100%.
Bootstrap support for B3L4Q4 as seed ortholog is 100%.

Group of orthologs #90. Best score 518 bits
Score difference with first non-orthologous sequence - C.reinhardtii:518 P.knowlesi:518

A8ID84              	100.00%		B3L240              	100.00%
Bootstrap support for A8ID84 as seed ortholog is 100%.
Bootstrap support for B3L240 as seed ortholog is 100%.

Group of orthologs #91. Best score 514 bits
Score difference with first non-orthologous sequence - C.reinhardtii:514 P.knowlesi:514

A8J6M5              	100.00%		B3L633              	100.00%
A8J6M4              	80.42%		
Bootstrap support for A8J6M5 as seed ortholog is 100%.
Bootstrap support for B3L633 as seed ortholog is 100%.

Group of orthologs #92. Best score 512 bits
Score difference with first non-orthologous sequence - C.reinhardtii:512 P.knowlesi:156

A8HPT4              	100.00%		B3L4Z9              	100.00%
Bootstrap support for A8HPT4 as seed ortholog is 100%.
Bootstrap support for B3L4Z9 as seed ortholog is 99%.

Group of orthologs #93. Best score 510 bits
Score difference with first non-orthologous sequence - C.reinhardtii:510 P.knowlesi:510

A8IED9              	100.00%		B3LAJ1              	100.00%
Bootstrap support for A8IED9 as seed ortholog is 100%.
Bootstrap support for B3LAJ1 as seed ortholog is 100%.

Group of orthologs #94. Best score 509 bits
Score difference with first non-orthologous sequence - C.reinhardtii:509 P.knowlesi:509

A8ILN4              	100.00%		B3L1Y7              	100.00%
Bootstrap support for A8ILN4 as seed ortholog is 100%.
Bootstrap support for B3L1Y7 as seed ortholog is 100%.

Group of orthologs #95. Best score 509 bits
Score difference with first non-orthologous sequence - C.reinhardtii:509 P.knowlesi:279

A8JF35              	100.00%		B3L8A1              	100.00%
Bootstrap support for A8JF35 as seed ortholog is 100%.
Bootstrap support for B3L8A1 as seed ortholog is 100%.

Group of orthologs #96. Best score 508 bits
Score difference with first non-orthologous sequence - C.reinhardtii:508 P.knowlesi:508

A8HYH7              	100.00%		B3L619              	100.00%
Bootstrap support for A8HYH7 as seed ortholog is 100%.
Bootstrap support for B3L619 as seed ortholog is 100%.

Group of orthologs #97. Best score 507 bits
Score difference with first non-orthologous sequence - C.reinhardtii:302 P.knowlesi:507

A8IH85              	100.00%		B3L4W9              	100.00%
Bootstrap support for A8IH85 as seed ortholog is 100%.
Bootstrap support for B3L4W9 as seed ortholog is 100%.

Group of orthologs #98. Best score 506 bits
Score difference with first non-orthologous sequence - C.reinhardtii:506 P.knowlesi:506

A8IVW3              	100.00%		B3L8T7              	100.00%
Bootstrap support for A8IVW3 as seed ortholog is 100%.
Bootstrap support for B3L8T7 as seed ortholog is 100%.

Group of orthologs #99. Best score 506 bits
Score difference with first non-orthologous sequence - C.reinhardtii:506 P.knowlesi:506

A8JG58              	100.00%		B3LAH4              	100.00%
Bootstrap support for A8JG58 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #100. Best score 503 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.knowlesi:503

A8HVM3              	100.00%		B3L565              	100.00%
Bootstrap support for A8HVM3 as seed ortholog is 99%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #101. Best score 503 bits
Score difference with first non-orthologous sequence - C.reinhardtii:370 P.knowlesi:503

P26526              	100.00%		B3L0I2              	100.00%
Bootstrap support for P26526 as seed ortholog is 100%.
Bootstrap support for B3L0I2 as seed ortholog is 100%.

Group of orthologs #102. Best score 501 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.knowlesi:501

A8IBN3              	100.00%		B3LCD4              	100.00%
Bootstrap support for A8IBN3 as seed ortholog is 99%.
Bootstrap support for B3LCD4 as seed ortholog is 100%.

Group of orthologs #103. Best score 498 bits
Score difference with first non-orthologous sequence - C.reinhardtii:444 P.knowlesi:498

A8HP46              	100.00%		B3KZW6              	100.00%
Bootstrap support for A8HP46 as seed ortholog is 100%.
Bootstrap support for B3KZW6 as seed ortholog is 100%.

Group of orthologs #104. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:495 P.knowlesi:24

A8IVJ3              	100.00%		B3LCI6              	100.00%
A8IVJ6              	51.15%		
A8J8G9              	7.65%		
Bootstrap support for A8IVJ3 as seed ortholog is 100%.
Bootstrap support for B3LCI6 as seed ortholog is 91%.

Group of orthologs #105. Best score 495 bits
Score difference with first non-orthologous sequence - C.reinhardtii:495 P.knowlesi:280

A8J8K0              	100.00%		B3L8U0              	100.00%
Bootstrap support for A8J8K0 as seed ortholog is 100%.
Bootstrap support for B3L8U0 as seed ortholog is 100%.

Group of orthologs #106. Best score 494 bits
Score difference with first non-orthologous sequence - C.reinhardtii:494 P.knowlesi:494

A8J5F7              	100.00%		B3L9M2              	100.00%
Bootstrap support for A8J5F7 as seed ortholog is 100%.
Bootstrap support for B3L9M2 as seed ortholog is 100%.

Group of orthologs #107. Best score 493 bits
Score difference with first non-orthologous sequence - C.reinhardtii:493 P.knowlesi:493

A8IE23              	100.00%		B3LBD4              	100.00%
Bootstrap support for A8IE23 as seed ortholog is 100%.
Bootstrap support for B3LBD4 as seed ortholog is 100%.

Group of orthologs #108. Best score 491 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.knowlesi:206

A8JGB2              	100.00%		B3L6X8              	100.00%
Bootstrap support for A8JGB2 as seed ortholog is 95%.
Bootstrap support for B3L6X8 as seed ortholog is 99%.

Group of orthologs #109. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.knowlesi:61

A8HS40              	100.00%		B3L9B1              	100.00%
Bootstrap support for A8HS40 as seed ortholog is 99%.
Bootstrap support for B3L9B1 as seed ortholog is 91%.

Group of orthologs #110. Best score 488 bits
Score difference with first non-orthologous sequence - C.reinhardtii:488 P.knowlesi:488

A8J3N8              	100.00%		B3L9L0              	100.00%
Bootstrap support for A8J3N8 as seed ortholog is 100%.
Bootstrap support for B3L9L0 as seed ortholog is 100%.

Group of orthologs #111. Best score 487 bits
Score difference with first non-orthologous sequence - C.reinhardtii:487 P.knowlesi:31

A8J4W8              	100.00%		B3L4L2              	100.00%
Bootstrap support for A8J4W8 as seed ortholog is 100%.
Bootstrap support for B3L4L2 as seed ortholog is 83%.

Group of orthologs #112. Best score 485 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.knowlesi:485

A8J9Q1              	100.00%		B3LC85              	100.00%
Bootstrap support for A8J9Q1 as seed ortholog is 100%.
Bootstrap support for B3LC85 as seed ortholog is 100%.

Group of orthologs #113. Best score 484 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.knowlesi:160

A8HQA8              	100.00%		B3L9V8              	100.00%
Bootstrap support for A8HQA8 as seed ortholog is 99%.
Bootstrap support for B3L9V8 as seed ortholog is 99%.

Group of orthologs #114. Best score 484 bits
Score difference with first non-orthologous sequence - C.reinhardtii:484 P.knowlesi:484

A8J2W2              	100.00%		B3L4H1              	100.00%
Bootstrap support for A8J2W2 as seed ortholog is 100%.
Bootstrap support for B3L4H1 as seed ortholog is 100%.

Group of orthologs #115. Best score 482 bits
Score difference with first non-orthologous sequence - C.reinhardtii:482 P.knowlesi:408

A8J014              	100.00%		B3L7W9              	100.00%
Bootstrap support for A8J014 as seed ortholog is 100%.
Bootstrap support for B3L7W9 as seed ortholog is 100%.

Group of orthologs #116. Best score 481 bits
Score difference with first non-orthologous sequence - C.reinhardtii:481 P.knowlesi:206

A8J3N3              	100.00%		B3L6I2              	100.00%
Bootstrap support for A8J3N3 as seed ortholog is 100%.
Bootstrap support for B3L6I2 as seed ortholog is 100%.

Group of orthologs #117. Best score 479 bits
Score difference with first non-orthologous sequence - C.reinhardtii:479 P.knowlesi:479

A8J940              	100.00%		B3LC95              	100.00%
Bootstrap support for A8J940 as seed ortholog is 100%.
Bootstrap support for B3LC95 as seed ortholog is 100%.

Group of orthologs #118. Best score 478 bits
Score difference with first non-orthologous sequence - C.reinhardtii:478 P.knowlesi:478

A8HNE3              	100.00%		B3L999              	100.00%
Bootstrap support for A8HNE3 as seed ortholog is 100%.
Bootstrap support for B3L999 as seed ortholog is 100%.

Group of orthologs #119. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:476 P.knowlesi:476

A8IWF9              	100.00%		B3L1W5              	100.00%
Bootstrap support for A8IWF9 as seed ortholog is 100%.
Bootstrap support for B3L1W5 as seed ortholog is 100%.

Group of orthologs #120. Best score 476 bits
Score difference with first non-orthologous sequence - C.reinhardtii:476 P.knowlesi:476

A8JHE3              	100.00%		B3L694              	100.00%
Bootstrap support for A8JHE3 as seed ortholog is 100%.
Bootstrap support for B3L694 as seed ortholog is 100%.

Group of orthologs #121. Best score 473 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 P.knowlesi:307

A8JIJ1              	100.00%		B3L0Q5              	100.00%
Bootstrap support for A8JIJ1 as seed ortholog is 100%.
Bootstrap support for B3L0Q5 as seed ortholog is 100%.

Group of orthologs #122. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:470 P.knowlesi:470

A8HZ23              	100.00%		B3KZK7              	100.00%
Bootstrap support for A8HZ23 as seed ortholog is 100%.
Bootstrap support for B3KZK7 as seed ortholog is 100%.

Group of orthologs #123. Best score 470 bits
Score difference with first non-orthologous sequence - C.reinhardtii:284 P.knowlesi:470

A8J280              	100.00%		B3L538              	100.00%
Bootstrap support for A8J280 as seed ortholog is 100%.
Bootstrap support for B3L538 as seed ortholog is 100%.

Group of orthologs #124. Best score 469 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.knowlesi:261

A8HXA2              	100.00%		B3LBS6              	100.00%
Bootstrap support for A8HXA2 as seed ortholog is 99%.
Bootstrap support for B3LBS6 as seed ortholog is 100%.

Group of orthologs #125. Best score 469 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 P.knowlesi:469

A8J4L1              	100.00%		B3L6T7              	100.00%
Bootstrap support for A8J4L1 as seed ortholog is 100%.
Bootstrap support for B3L6T7 as seed ortholog is 100%.

Group of orthologs #126. Best score 466 bits
Score difference with first non-orthologous sequence - C.reinhardtii:394 P.knowlesi:158

A8IWJ5              	100.00%		B3L0N7              	100.00%
Bootstrap support for A8IWJ5 as seed ortholog is 100%.
Bootstrap support for B3L0N7 as seed ortholog is 99%.

Group of orthologs #127. Best score 465 bits
Score difference with first non-orthologous sequence - C.reinhardtii:465 P.knowlesi:465

A8HYU5              	100.00%		B3L2N9              	100.00%
Bootstrap support for A8HYU5 as seed ortholog is 100%.
Bootstrap support for B3L2N9 as seed ortholog is 100%.

Group of orthologs #128. Best score 464 bits
Score difference with first non-orthologous sequence - C.reinhardtii:464 P.knowlesi:464

A8HQ52              	100.00%		B3L9X6              	100.00%
Bootstrap support for A8HQ52 as seed ortholog is 100%.
Bootstrap support for B3L9X6 as seed ortholog is 100%.

Group of orthologs #129. Best score 462 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.knowlesi:242

A8IVR6              	100.00%		B3L7D9              	100.00%
Bootstrap support for A8IVR6 as seed ortholog is 99%.
Bootstrap support for B3L7D9 as seed ortholog is 100%.

Group of orthologs #130. Best score 461 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.knowlesi:461

A8IDL8              	100.00%		B3L776              	100.00%
Bootstrap support for A8IDL8 as seed ortholog is 99%.
Bootstrap support for B3L776 as seed ortholog is 100%.

Group of orthologs #131. Best score 460 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 P.knowlesi:460

A8HXR2              	100.00%		B3L8S5              	100.00%
P17746              	8.78%		
Bootstrap support for A8HXR2 as seed ortholog is 100%.
Bootstrap support for B3L8S5 as seed ortholog is 100%.

Group of orthologs #132. Best score 460 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.knowlesi:460

A8J3G7              	100.00%		B3L2S3              	100.00%
Bootstrap support for A8J3G7 as seed ortholog is 79%.
Bootstrap support for B3L2S3 as seed ortholog is 100%.

Group of orthologs #133. Best score 459 bits
Score difference with first non-orthologous sequence - C.reinhardtii:373 P.knowlesi:459

A8IYG8              	100.00%		B3L5H4              	100.00%
Bootstrap support for A8IYG8 as seed ortholog is 100%.
Bootstrap support for B3L5H4 as seed ortholog is 100%.

Group of orthologs #134. Best score 459 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:343

A8JF80              	100.00%		B3L4N6              	100.00%
Bootstrap support for A8JF80 as seed ortholog is 99%.
Bootstrap support for B3L4N6 as seed ortholog is 100%.

Group of orthologs #135. Best score 458 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:286

A8IBD5              	100.00%		B3KZB3              	100.00%
Bootstrap support for A8IBD5 as seed ortholog is 97%.
Bootstrap support for B3KZB3 as seed ortholog is 100%.

Group of orthologs #136. Best score 456 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.knowlesi:253

A8I985              	100.00%		B3L711              	100.00%
Bootstrap support for A8I985 as seed ortholog is 99%.
Bootstrap support for B3L711 as seed ortholog is 100%.

Group of orthologs #137. Best score 452 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.knowlesi:452

A8HS79              	100.00%		B3L9R6              	100.00%
Bootstrap support for A8HS79 as seed ortholog is 100%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #138. Best score 450 bits
Score difference with first non-orthologous sequence - C.reinhardtii:450 P.knowlesi:364

A8JFK4              	100.00%		B3LD11              	100.00%
A8J4R9              	19.96%		
Q8W4V3              	19.77%		
Bootstrap support for A8JFK4 as seed ortholog is 100%.
Bootstrap support for B3LD11 as seed ortholog is 100%.

Group of orthologs #139. Best score 439 bits
Score difference with first non-orthologous sequence - C.reinhardtii:439 P.knowlesi:439

A8I793              	100.00%		B3L5F6              	100.00%
Bootstrap support for A8I793 as seed ortholog is 100%.
Bootstrap support for B3L5F6 as seed ortholog is 100%.

Group of orthologs #140. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.knowlesi:438

A8I495              	100.00%		B3L0B3              	100.00%
Bootstrap support for A8I495 as seed ortholog is 80%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #141. Best score 438 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.knowlesi:438

A8JFR4              	100.00%		B3L7W8              	100.00%
Bootstrap support for A8JFR4 as seed ortholog is 100%.
Bootstrap support for B3L7W8 as seed ortholog is 100%.

Group of orthologs #142. Best score 437 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.knowlesi:437

A8I6G3              	100.00%		B3LBY6              	100.00%
Bootstrap support for A8I6G3 as seed ortholog is 99%.
Bootstrap support for B3LBY6 as seed ortholog is 100%.

Group of orthologs #143. Best score 434 bits
Score difference with first non-orthologous sequence - C.reinhardtii:434 P.knowlesi:434

A8HXM5              	100.00%		B3LD39              	100.00%
Bootstrap support for A8HXM5 as seed ortholog is 100%.
Bootstrap support for B3LD39 as seed ortholog is 100%.

Group of orthologs #144. Best score 433 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 P.knowlesi:433

A8J0X7              	100.00%		B3KZQ8              	100.00%
Bootstrap support for A8J0X7 as seed ortholog is 100%.
Bootstrap support for B3KZQ8 as seed ortholog is 100%.

Group of orthologs #145. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:428 P.knowlesi:428

A8IIG8              	100.00%		B3LD45              	100.00%
Bootstrap support for A8IIG8 as seed ortholog is 100%.
Bootstrap support for B3LD45 as seed ortholog is 100%.

Group of orthologs #146. Best score 428 bits
Score difference with first non-orthologous sequence - C.reinhardtii:428 P.knowlesi:428

A8JEP9              	100.00%		B3LA93              	100.00%
Bootstrap support for A8JEP9 as seed ortholog is 100%.
Bootstrap support for B3LA93 as seed ortholog is 100%.

Group of orthologs #147. Best score 423 bits
Score difference with first non-orthologous sequence - C.reinhardtii:423 P.knowlesi:257

A8ILR9              	100.00%		B3LAV4              	100.00%
A8IKH1              	6.13%		
Bootstrap support for A8ILR9 as seed ortholog is 100%.
Bootstrap support for B3LAV4 as seed ortholog is 100%.

Group of orthologs #148. Best score 422 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.knowlesi:422

A8I0G3              	100.00%		B3KZ01              	100.00%
Bootstrap support for A8I0G3 as seed ortholog is 99%.
Bootstrap support for B3KZ01 as seed ortholog is 100%.

Group of orthologs #149. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:421

A8IIL1              	100.00%		B3L1X3              	100.00%
A8JDP0              	7.02%		
Bootstrap support for A8IIL1 as seed ortholog is 99%.
Bootstrap support for B3L1X3 as seed ortholog is 100%.

Group of orthologs #150. Best score 421 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.knowlesi:194

A8J448              	100.00%		B3L2Q5              	100.00%
Bootstrap support for A8J448 as seed ortholog is 99%.
Bootstrap support for B3L2Q5 as seed ortholog is 99%.

Group of orthologs #151. Best score 420 bits
Score difference with first non-orthologous sequence - C.reinhardtii:420 P.knowlesi:280

A8J387              	100.00%		B3LCI0              	100.00%
Bootstrap support for A8J387 as seed ortholog is 100%.
Bootstrap support for B3LCI0 as seed ortholog is 100%.

Group of orthologs #152. Best score 419 bits
Score difference with first non-orthologous sequence - C.reinhardtii:419 P.knowlesi:419

A8IID0              	100.00%		B3L3M4              	100.00%
Bootstrap support for A8IID0 as seed ortholog is 100%.
Bootstrap support for B3L3M4 as seed ortholog is 100%.

Group of orthologs #153. Best score 418 bits
Score difference with first non-orthologous sequence - C.reinhardtii:418 P.knowlesi:418

A8J9E6              	100.00%		B3LBE8              	100.00%
Bootstrap support for A8J9E6 as seed ortholog is 100%.
Bootstrap support for B3LBE8 as seed ortholog is 100%.

Group of orthologs #154. Best score 416 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.knowlesi:164

A8IBY2              	100.00%		B3LCA3              	100.00%
Bootstrap support for A8IBY2 as seed ortholog is 99%.
Bootstrap support for B3LCA3 as seed ortholog is 99%.

Group of orthologs #155. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 P.knowlesi:415

A8IST3              	100.00%		B3KZ79              	100.00%
A8J1K0              	45.79%		
A8J9X3              	34.51%		
Bootstrap support for A8IST3 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #156. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.knowlesi:76

A8IMP0              	100.00%		B3L454              	100.00%
Bootstrap support for A8IMP0 as seed ortholog is 100%.
Bootstrap support for B3L454 as seed ortholog is 98%.

Group of orthologs #157. Best score 415 bits
Score difference with first non-orthologous sequence - C.reinhardtii:415 P.knowlesi:415

A8IWV0              	100.00%		B3L299              	100.00%
Bootstrap support for A8IWV0 as seed ortholog is 100%.
Bootstrap support for B3L299 as seed ortholog is 100%.

Group of orthologs #158. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.knowlesi:414

A8IET6              	100.00%		B3L3U5              	100.00%
Bootstrap support for A8IET6 as seed ortholog is 100%.
Bootstrap support for B3L3U5 as seed ortholog is 100%.

Group of orthologs #159. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.knowlesi:288

A8I675              	100.00%		B3L794              	100.00%
Bootstrap support for A8I675 as seed ortholog is 100%.
Bootstrap support for B3L794 as seed ortholog is 100%.

Group of orthologs #160. Best score 414 bits
Score difference with first non-orthologous sequence - C.reinhardtii:414 P.knowlesi:414

Q84UB2              	100.00%		B3L3R6              	100.00%
Bootstrap support for Q84UB2 as seed ortholog is 100%.
Bootstrap support for B3L3R6 as seed ortholog is 100%.

Group of orthologs #161. Best score 411 bits
Score difference with first non-orthologous sequence - C.reinhardtii:411 P.knowlesi:411

A8IBR6              	100.00%		B3LD81              	100.00%
Bootstrap support for A8IBR6 as seed ortholog is 100%.
Bootstrap support for B3LD81 as seed ortholog is 100%.

Group of orthologs #162. Best score 409 bits
Score difference with first non-orthologous sequence - C.reinhardtii:409 P.knowlesi:409

A8I0Z4              	100.00%		B3L7S4              	100.00%
Bootstrap support for A8I0Z4 as seed ortholog is 100%.
Bootstrap support for B3L7S4 as seed ortholog is 100%.

Group of orthologs #163. Best score 409 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.knowlesi:409

A8JHR9              	100.00%		B3L9D3              	100.00%
Bootstrap support for A8JHR9 as seed ortholog is 99%.
Bootstrap support for B3L9D3 as seed ortholog is 100%.

Group of orthologs #164. Best score 408 bits
Score difference with first non-orthologous sequence - C.reinhardtii:408 P.knowlesi:408

A8J2Z8              	100.00%		B3KZ67              	100.00%
Bootstrap support for A8J2Z8 as seed ortholog is 100%.
Bootstrap support for B3KZ67 as seed ortholog is 100%.

Group of orthologs #165. Best score 406 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:65

A8J6K6              	100.00%		B3L2D6              	100.00%
Bootstrap support for A8J6K6 as seed ortholog is 99%.
Bootstrap support for B3L2D6 as seed ortholog is 94%.

Group of orthologs #166. Best score 404 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:181

A8IJV1              	100.00%		B3L0G9              	100.00%
Bootstrap support for A8IJV1 as seed ortholog is 99%.
Bootstrap support for B3L0G9 as seed ortholog is 99%.

Group of orthologs #167. Best score 401 bits
Score difference with first non-orthologous sequence - C.reinhardtii:401 P.knowlesi:401

A8JAP7              	100.00%		B3L2M5              	100.00%
Bootstrap support for A8JAP7 as seed ortholog is 100%.
Bootstrap support for B3L2M5 as seed ortholog is 100%.

Group of orthologs #168. Best score 400 bits
Score difference with first non-orthologous sequence - C.reinhardtii:400 P.knowlesi:400

A8JCS4              	100.00%		B3L733              	100.00%
Bootstrap support for A8JCS4 as seed ortholog is 100%.
Bootstrap support for B3L733 as seed ortholog is 100%.

Group of orthologs #169. Best score 399 bits
Score difference with first non-orthologous sequence - C.reinhardtii:399 P.knowlesi:399

A8JAY4              	100.00%		B3LC50              	100.00%
Bootstrap support for A8JAY4 as seed ortholog is 100%.
Bootstrap support for B3LC50 as seed ortholog is 100%.

Group of orthologs #170. Best score 398 bits
Score difference with first non-orthologous sequence - C.reinhardtii:398 P.knowlesi:398

A8J146              	100.00%		B3LD69              	100.00%
Bootstrap support for A8J146 as seed ortholog is 100%.
Bootstrap support for B3LD69 as seed ortholog is 100%.

Group of orthologs #171. Best score 396 bits
Score difference with first non-orthologous sequence - C.reinhardtii:396 P.knowlesi:396

A8HPZ4              	100.00%		B3LBA5              	100.00%
Bootstrap support for A8HPZ4 as seed ortholog is 100%.
Bootstrap support for B3LBA5 as seed ortholog is 100%.

Group of orthologs #172. Best score 393 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.knowlesi:27

A8JDN1              	100.00%		B3L2U9              	100.00%
A8JBP0              	13.99%		
Bootstrap support for A8JDN1 as seed ortholog is 99%.
Bootstrap support for B3L2U9 as seed ortholog is 78%.

Group of orthologs #173. Best score 392 bits
Score difference with first non-orthologous sequence - C.reinhardtii:392 P.knowlesi:255

A8IRT6              	100.00%		B3L070              	100.00%
Bootstrap support for A8IRT6 as seed ortholog is 100%.
Bootstrap support for B3L070 as seed ortholog is 100%.

Group of orthologs #174. Best score 391 bits
Score difference with first non-orthologous sequence - C.reinhardtii:391 P.knowlesi:391

A8HYQ1              	100.00%		B3LAN7              	100.00%
Bootstrap support for A8HYQ1 as seed ortholog is 100%.
Bootstrap support for B3LAN7 as seed ortholog is 100%.

Group of orthologs #175. Best score 389 bits
Score difference with first non-orthologous sequence - C.reinhardtii:389 P.knowlesi:389

A8IA86              	100.00%		B3LAT9              	100.00%
Bootstrap support for A8IA86 as seed ortholog is 100%.
Bootstrap support for B3LAT9 as seed ortholog is 100%.

Group of orthologs #176. Best score 388 bits
Score difference with first non-orthologous sequence - C.reinhardtii:388 P.knowlesi:388

A8IPH5              	100.00%		B3L5Z1              	100.00%
Bootstrap support for A8IPH5 as seed ortholog is 100%.
Bootstrap support for B3L5Z1 as seed ortholog is 100%.

Group of orthologs #177. Best score 385 bits
Score difference with first non-orthologous sequence - C.reinhardtii:385 P.knowlesi:385

A8I093              	100.00%		B3L6G7              	100.00%
Bootstrap support for A8I093 as seed ortholog is 100%.
Bootstrap support for B3L6G7 as seed ortholog is 100%.

Group of orthologs #178. Best score 384 bits
Score difference with first non-orthologous sequence - C.reinhardtii:384 P.knowlesi:384

A8IWJ8              	100.00%		B3L4N7              	100.00%
Bootstrap support for A8IWJ8 as seed ortholog is 100%.
Bootstrap support for B3L4N7 as seed ortholog is 100%.

Group of orthologs #179. Best score 381 bits
Score difference with first non-orthologous sequence - C.reinhardtii:381 P.knowlesi:336

A8HZA9              	100.00%		B3L4H6              	100.00%
Bootstrap support for A8HZA9 as seed ortholog is 100%.
Bootstrap support for B3L4H6 as seed ortholog is 100%.

Group of orthologs #180. Best score 380 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:46

A8JH58              	100.00%		B3L611              	100.00%
Bootstrap support for A8JH58 as seed ortholog is 91%.
Bootstrap support for B3L611 as seed ortholog is 85%.

Group of orthologs #181. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.knowlesi:285

A8J8Y1              	100.00%		B3L122              	100.00%
Bootstrap support for A8J8Y1 as seed ortholog is 100%.
Bootstrap support for B3L122 as seed ortholog is 100%.

Group of orthologs #182. Best score 379 bits
Score difference with first non-orthologous sequence - C.reinhardtii:379 P.knowlesi:379

A8J5U1              	100.00%		B3L8M2              	100.00%
Bootstrap support for A8J5U1 as seed ortholog is 100%.
Bootstrap support for B3L8M2 as seed ortholog is 100%.

Group of orthologs #183. Best score 377 bits
Score difference with first non-orthologous sequence - C.reinhardtii:377 P.knowlesi:377

A8J168              	100.00%		B3KZH9              	100.00%
Bootstrap support for A8J168 as seed ortholog is 100%.
Bootstrap support for B3KZH9 as seed ortholog is 100%.

Group of orthologs #184. Best score 376 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.knowlesi:146

Q6IV67              	100.00%		B3L472              	100.00%
Bootstrap support for Q6IV67 as seed ortholog is 100%.
Bootstrap support for B3L472 as seed ortholog is 100%.

Group of orthologs #185. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:375 P.knowlesi:375

A8IDM1              	100.00%		B3L6G4              	100.00%
Bootstrap support for A8IDM1 as seed ortholog is 100%.
Bootstrap support for B3L6G4 as seed ortholog is 100%.

Group of orthologs #186. Best score 375 bits
Score difference with first non-orthologous sequence - C.reinhardtii:268 P.knowlesi:206

A8J1X8              	100.00%		B3KZP7              	100.00%
Bootstrap support for A8J1X8 as seed ortholog is 100%.
Bootstrap support for B3KZP7 as seed ortholog is 99%.

Group of orthologs #187. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 P.knowlesi:171

A8IHM8              	100.00%		B3L769              	100.00%
Bootstrap support for A8IHM8 as seed ortholog is 100%.
Bootstrap support for B3L769 as seed ortholog is 100%.

Group of orthologs #188. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:374 P.knowlesi:374

A8IW34              	100.00%		B3L781              	100.00%
Bootstrap support for A8IW34 as seed ortholog is 100%.
Bootstrap support for B3L781 as seed ortholog is 100%.

Group of orthologs #189. Best score 374 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:154

A8J1Z0              	100.00%		B3L3U6              	100.00%
Bootstrap support for A8J1Z0 as seed ortholog is 99%.
Bootstrap support for B3L3U6 as seed ortholog is 99%.

Group of orthologs #190. Best score 371 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.knowlesi:371

A8I2V9              	100.00%		B3L8F2              	100.00%
Bootstrap support for A8I2V9 as seed ortholog is 94%.
Bootstrap support for B3L8F2 as seed ortholog is 100%.

Group of orthologs #191. Best score 370 bits
Score difference with first non-orthologous sequence - C.reinhardtii:370 P.knowlesi:370

A8J0I0              	100.00%		B3L6J8              	100.00%
Bootstrap support for A8J0I0 as seed ortholog is 100%.
Bootstrap support for B3L6J8 as seed ortholog is 100%.

Group of orthologs #192. Best score 368 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.knowlesi:368

A8HPA0              	100.00%		B3L6T8              	100.00%
Bootstrap support for A8HPA0 as seed ortholog is 100%.
Bootstrap support for B3L6T8 as seed ortholog is 100%.

Group of orthologs #193. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:367 P.knowlesi:279

A8IFH4              	100.00%		B3L3C9              	100.00%
Bootstrap support for A8IFH4 as seed ortholog is 100%.
Bootstrap support for B3L3C9 as seed ortholog is 100%.

Group of orthologs #194. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.knowlesi:367

A8JC04              	100.00%		B3L2P2              	100.00%
Bootstrap support for A8JC04 as seed ortholog is 99%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #195. Best score 367 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 P.knowlesi:367

Q6Q242              	100.00%		B3L4M7              	100.00%
Bootstrap support for Q6Q242 as seed ortholog is 100%.
Bootstrap support for B3L4M7 as seed ortholog is 100%.

Group of orthologs #196. Best score 364 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.knowlesi:364

A8HME6              	100.00%		B3LCN2              	100.00%
Bootstrap support for A8HME6 as seed ortholog is 100%.
Bootstrap support for B3LCN2 as seed ortholog is 100%.

Group of orthologs #197. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 P.knowlesi:363

A8IDE6              	100.00%		B3L6F2              	100.00%
Bootstrap support for A8IDE6 as seed ortholog is 100%.
Bootstrap support for B3L6F2 as seed ortholog is 100%.

Group of orthologs #198. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:363 P.knowlesi:363

A8IM71              	100.00%		B3L5Q6              	100.00%
Bootstrap support for A8IM71 as seed ortholog is 100%.
Bootstrap support for B3L5Q6 as seed ortholog is 100%.

Group of orthologs #199. Best score 363 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.knowlesi:363

A8J5P7              	100.00%		B3L310              	100.00%
Bootstrap support for A8J5P7 as seed ortholog is 100%.
Bootstrap support for B3L310 as seed ortholog is 100%.

Group of orthologs #200. Best score 361 bits
Score difference with first non-orthologous sequence - C.reinhardtii:361 P.knowlesi:361

A8JGK6              	100.00%		B3LA33              	100.00%
Bootstrap support for A8JGK6 as seed ortholog is 100%.
Bootstrap support for B3LA33 as seed ortholog is 100%.

Group of orthologs #201. Best score 358 bits
Score difference with first non-orthologous sequence - C.reinhardtii:358 P.knowlesi:358

A8HPR5              	100.00%		B3LAN9              	100.00%
A8J484              	45.61%		
Bootstrap support for A8HPR5 as seed ortholog is 100%.
Bootstrap support for B3LAN9 as seed ortholog is 100%.

Group of orthologs #202. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:355 P.knowlesi:355

A8HME4              	100.00%		B3L9U8              	100.00%
Bootstrap support for A8HME4 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #203. Best score 355 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.knowlesi:355

Q42690              	100.00%		B3L9W9              	100.00%
Bootstrap support for Q42690 as seed ortholog is 96%.
Bootstrap support for B3L9W9 as seed ortholog is 100%.

Group of orthologs #204. Best score 353 bits
Score difference with first non-orthologous sequence - C.reinhardtii:353 P.knowlesi:353

A8JD96              	100.00%		B3L1J6              	100.00%
Bootstrap support for A8JD96 as seed ortholog is 100%.
Bootstrap support for B3L1J6 as seed ortholog is 100%.

Group of orthologs #205. Best score 352 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.knowlesi:160

A8I1P3              	100.00%		B3L755              	100.00%
Bootstrap support for A8I1P3 as seed ortholog is 93%.
Bootstrap support for B3L755 as seed ortholog is 100%.

Group of orthologs #206. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.knowlesi:351

A8IF08              	100.00%		B3L0L1              	100.00%
Bootstrap support for A8IF08 as seed ortholog is 100%.
Bootstrap support for B3L0L1 as seed ortholog is 100%.

Group of orthologs #207. Best score 351 bits
Score difference with first non-orthologous sequence - C.reinhardtii:351 P.knowlesi:351

A8ITK3              	100.00%		B3LAE9              	100.00%
Bootstrap support for A8ITK3 as seed ortholog is 100%.
Bootstrap support for B3LAE9 as seed ortholog is 100%.

Group of orthologs #208. Best score 349 bits
Score difference with first non-orthologous sequence - C.reinhardtii:349 P.knowlesi:349

A8J5T5              	100.00%		B3L0L0              	100.00%
Bootstrap support for A8J5T5 as seed ortholog is 100%.
Bootstrap support for B3L0L0 as seed ortholog is 100%.

Group of orthologs #209. Best score 348 bits
Score difference with first non-orthologous sequence - C.reinhardtii:182 P.knowlesi:196

A8JHL1              	100.00%		B3LDD0              	100.00%
Bootstrap support for A8JHL1 as seed ortholog is 99%.
Bootstrap support for B3LDD0 as seed ortholog is 99%.

Group of orthologs #210. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.knowlesi:347

A8HX38              	100.00%		B3L753              	100.00%
Bootstrap support for A8HX38 as seed ortholog is 99%.
Bootstrap support for B3L753 as seed ortholog is 100%.

Group of orthologs #211. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:347 P.knowlesi:347

A8HPU4              	100.00%		B3LBS4              	100.00%
Bootstrap support for A8HPU4 as seed ortholog is 100%.
Bootstrap support for B3LBS4 as seed ortholog is 100%.

Group of orthologs #212. Best score 347 bits
Score difference with first non-orthologous sequence - C.reinhardtii:256 P.knowlesi:347

A8IT31              	100.00%		B3L878              	100.00%
Bootstrap support for A8IT31 as seed ortholog is 100%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #213. Best score 345 bits
Score difference with first non-orthologous sequence - C.reinhardtii:345 P.knowlesi:345

A8IRV0              	100.00%		B3LBF1              	100.00%
Bootstrap support for A8IRV0 as seed ortholog is 100%.
Bootstrap support for B3LBF1 as seed ortholog is 100%.

Group of orthologs #214. Best score 345 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.knowlesi:345

A8JCY9              	100.00%		B3L287              	100.00%
Bootstrap support for A8JCY9 as seed ortholog is 100%.
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #215. Best score 343 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 P.knowlesi:343

A8JDI7              	100.00%		B3L1D8              	100.00%
Bootstrap support for A8JDI7 as seed ortholog is 100%.
Bootstrap support for B3L1D8 as seed ortholog is 100%.

Group of orthologs #216. Best score 343 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.knowlesi:343

A8JHC9              	100.00%		B3L1Y4              	100.00%
Bootstrap support for A8JHC9 as seed ortholog is 100%.
Bootstrap support for B3L1Y4 as seed ortholog is 100%.

Group of orthologs #217. Best score 342 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.knowlesi:342

A8J6M3              	100.00%		B3L8C2              	100.00%
Bootstrap support for A8J6M3 as seed ortholog is 100%.
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #218. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:341 P.knowlesi:341

A8IKR1              	100.00%		B3L384              	100.00%
A8J103              	11.62%		
Bootstrap support for A8IKR1 as seed ortholog is 100%.
Bootstrap support for B3L384 as seed ortholog is 100%.

Group of orthologs #219. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.knowlesi:341

A8IVK1              	100.00%		B3L699              	100.00%
Bootstrap support for A8IVK1 as seed ortholog is 100%.
Bootstrap support for B3L699 as seed ortholog is 100%.

Group of orthologs #220. Best score 341 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.knowlesi:341

A8IQ05              	100.00%		B3LA75              	100.00%
Bootstrap support for A8IQ05 as seed ortholog is 100%.
Bootstrap support for B3LA75 as seed ortholog is 100%.

Group of orthologs #221. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:340 P.knowlesi:63

A8JDY3              	100.00%		B3KZU1              	100.00%
Bootstrap support for A8JDY3 as seed ortholog is 100%.
Bootstrap support for B3KZU1 as seed ortholog is 71%.
Alternative seed ortholog is B3L5Y2 (63 bits away from this cluster)

Group of orthologs #222. Best score 340 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 P.knowlesi:193

A8J1T4              	100.00%		B3LCW5              	100.00%
Bootstrap support for A8J1T4 as seed ortholog is 100%.
Bootstrap support for B3LCW5 as seed ortholog is 99%.

Group of orthologs #223. Best score 339 bits
Score difference with first non-orthologous sequence - C.reinhardtii:339 P.knowlesi:62

A8J510              	100.00%		B3L8H3              	100.00%
                    	       		B3L6N3              	11.95%
Bootstrap support for A8J510 as seed ortholog is 100%.
Bootstrap support for B3L8H3 as seed ortholog is 92%.

Group of orthologs #224. Best score 338 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.knowlesi:181

A8IAJ1              	100.00%		B3L9J0              	100.00%
Bootstrap support for A8IAJ1 as seed ortholog is 99%.
Bootstrap support for B3L9J0 as seed ortholog is 100%.

Group of orthologs #225. Best score 336 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.knowlesi:24

A8HSJ3              	100.00%		B3L8L4              	100.00%
                    	       		B3L498              	7.25%
Bootstrap support for A8HSJ3 as seed ortholog is 88%.
Bootstrap support for B3L8L4 as seed ortholog is 70%.
Alternative seed ortholog is B3L068 (24 bits away from this cluster)

Group of orthologs #226. Best score 334 bits
Score difference with first non-orthologous sequence - C.reinhardtii:334 P.knowlesi:334

A8JF71              	100.00%		B3L7S7              	100.00%
Bootstrap support for A8JF71 as seed ortholog is 100%.
Bootstrap support for B3L7S7 as seed ortholog is 100%.

Group of orthologs #227. Best score 333 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 P.knowlesi:333

A8J5K4              	100.00%		B3L4Y8              	100.00%
Bootstrap support for A8J5K4 as seed ortholog is 100%.
Bootstrap support for B3L4Y8 as seed ortholog is 100%.

Group of orthologs #228. Best score 333 bits
Score difference with first non-orthologous sequence - C.reinhardtii:333 P.knowlesi:333

A8JHM2              	100.00%		B3LB47              	100.00%
Bootstrap support for A8JHM2 as seed ortholog is 100%.
Bootstrap support for B3LB47 as seed ortholog is 100%.

Group of orthologs #229. Best score 332 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.knowlesi:332

A8J3F9              	100.00%		B3LAG9              	100.00%
Bootstrap support for A8J3F9 as seed ortholog is 99%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #230. Best score 329 bits
Score difference with first non-orthologous sequence - C.reinhardtii:329 P.knowlesi:329

A8IAM9              	100.00%		B3L422              	100.00%
Bootstrap support for A8IAM9 as seed ortholog is 100%.
Bootstrap support for B3L422 as seed ortholog is 100%.

Group of orthologs #231. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 P.knowlesi:327

A8HM38              	100.00%		B3L6B4              	100.00%
Bootstrap support for A8HM38 as seed ortholog is 100%.
Bootstrap support for B3L6B4 as seed ortholog is 100%.

Group of orthologs #232. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 P.knowlesi:327

A8IK52              	100.00%		B3KZ23              	100.00%
Bootstrap support for A8IK52 as seed ortholog is 100%.
Bootstrap support for B3KZ23 as seed ortholog is 100%.

Group of orthologs #233. Best score 327 bits
Score difference with first non-orthologous sequence - C.reinhardtii:327 P.knowlesi:327

A8JHA4              	100.00%		B3LD14              	100.00%
Bootstrap support for A8JHA4 as seed ortholog is 100%.
Bootstrap support for B3LD14 as seed ortholog is 100%.

Group of orthologs #234. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 P.knowlesi:208

A8J6S4              	100.00%		B3L873              	100.00%
Q6VTH1              	16.98%		
A8II54              	14.49%		
Bootstrap support for A8J6S4 as seed ortholog is 100%.
Bootstrap support for B3L873 as seed ortholog is 100%.

Group of orthologs #235. Best score 326 bits
Score difference with first non-orthologous sequence - C.reinhardtii:326 P.knowlesi:326

A8HUE0              	100.00%		B3L8Q5              	100.00%
Bootstrap support for A8HUE0 as seed ortholog is 100%.
Bootstrap support for B3L8Q5 as seed ortholog is 100%.

Group of orthologs #236. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:325

A8IEF3              	100.00%		B3LAC9              	100.00%
Bootstrap support for A8IEF3 as seed ortholog is 99%.
Bootstrap support for B3LAC9 as seed ortholog is 100%.

Group of orthologs #237. Best score 325 bits
Score difference with first non-orthologous sequence - C.reinhardtii:325 P.knowlesi:214

A8J2Z9              	100.00%		B3L014              	100.00%
Bootstrap support for A8J2Z9 as seed ortholog is 100%.
Bootstrap support for B3L014 as seed ortholog is 100%.

Group of orthologs #238. Best score 324 bits
Score difference with first non-orthologous sequence - C.reinhardtii:324 P.knowlesi:324

A8J386              	100.00%		B3L4Y9              	100.00%
Bootstrap support for A8J386 as seed ortholog is 100%.
Bootstrap support for B3L4Y9 as seed ortholog is 100%.

Group of orthologs #239. Best score 323 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:115

A8JDQ4              	100.00%		B3L6H8              	100.00%
Bootstrap support for A8JDQ4 as seed ortholog is 100%.
Bootstrap support for B3L6H8 as seed ortholog is 100%.

Group of orthologs #240. Best score 321 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:321

A8IS72              	100.00%		B3L6V4              	100.00%
Bootstrap support for A8IS72 as seed ortholog is 93%.
Bootstrap support for B3L6V4 as seed ortholog is 100%.

Group of orthologs #241. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 P.knowlesi:320

A8J8T7              	100.00%		B3LBC7              	100.00%
A8JDQ7              	46.59%		
Bootstrap support for A8J8T7 as seed ortholog is 100%.
Bootstrap support for B3LBC7 as seed ortholog is 100%.

Group of orthologs #242. Best score 320 bits
Score difference with first non-orthologous sequence - C.reinhardtii:320 P.knowlesi:320

A8HX04              	100.00%		B3LCC4              	100.00%
Bootstrap support for A8HX04 as seed ortholog is 100%.
Bootstrap support for B3LCC4 as seed ortholog is 100%.

Group of orthologs #243. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.knowlesi:319

A8IN76              	100.00%		B3L6H1              	100.00%
Bootstrap support for A8IN76 as seed ortholog is 100%.
Bootstrap support for B3L6H1 as seed ortholog is 100%.

Group of orthologs #244. Best score 319 bits
Score difference with first non-orthologous sequence - C.reinhardtii:319 P.knowlesi:319

Q8LRU3              	100.00%		B3LA52              	100.00%
Bootstrap support for Q8LRU3 as seed ortholog is 100%.
Bootstrap support for B3LA52 as seed ortholog is 100%.

Group of orthologs #245. Best score 318 bits
Score difference with first non-orthologous sequence - C.reinhardtii:318 P.knowlesi:318

A8IWF2              	100.00%		B3L7Z8              	100.00%
Bootstrap support for A8IWF2 as seed ortholog is 100%.
Bootstrap support for B3L7Z8 as seed ortholog is 100%.

Group of orthologs #246. Best score 314 bits
Score difference with first non-orthologous sequence - C.reinhardtii:314 P.knowlesi:314

A8HVA6              	100.00%		B3L8L1              	100.00%
Bootstrap support for A8HVA6 as seed ortholog is 100%.
Bootstrap support for B3L8L1 as seed ortholog is 100%.

Group of orthologs #247. Best score 313 bits
Score difference with first non-orthologous sequence - C.reinhardtii:234 P.knowlesi:313

A8J0A5              	100.00%		B3L5B4              	100.00%
Bootstrap support for A8J0A5 as seed ortholog is 100%.
Bootstrap support for B3L5B4 as seed ortholog is 100%.

Group of orthologs #248. Best score 312 bits
Score difference with first non-orthologous sequence - C.reinhardtii:312 P.knowlesi:312

A8IMC5              	100.00%		B3L351              	100.00%
Bootstrap support for A8IMC5 as seed ortholog is 100%.
Bootstrap support for B3L351 as seed ortholog is 100%.

Group of orthologs #249. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:311 P.knowlesi:311

A8J633              	100.00%		B3L0Z7              	100.00%
Bootstrap support for A8J633 as seed ortholog is 100%.
Bootstrap support for B3L0Z7 as seed ortholog is 100%.

Group of orthologs #250. Best score 311 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.knowlesi:311

A8J2R6              	100.00%		B3L7I7              	100.00%
Bootstrap support for A8J2R6 as seed ortholog is 100%.
Bootstrap support for B3L7I7 as seed ortholog is 100%.

Group of orthologs #251. Best score 309 bits
Score difference with first non-orthologous sequence - C.reinhardtii:309 P.knowlesi:309

A8HS48              	100.00%		B3L3W7              	100.00%
Bootstrap support for A8HS48 as seed ortholog is 100%.
Bootstrap support for B3L3W7 as seed ortholog is 100%.

Group of orthologs #252. Best score 308 bits
Score difference with first non-orthologous sequence - C.reinhardtii:308 P.knowlesi:308

A8I8V6              	100.00%		B3L3U0              	100.00%
Bootstrap support for A8I8V6 as seed ortholog is 100%.
Bootstrap support for B3L3U0 as seed ortholog is 100%.

Group of orthologs #253. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.knowlesi:307

A8I982              	100.00%		B3L1H7              	100.00%
Bootstrap support for A8I982 as seed ortholog is 100%.
Bootstrap support for B3L1H7 as seed ortholog is 100%.

Group of orthologs #254. Best score 307 bits
Score difference with first non-orthologous sequence - C.reinhardtii:307 P.knowlesi:307

A8IZK3              	100.00%		B3LAL7              	100.00%
Bootstrap support for A8IZK3 as seed ortholog is 100%.
Bootstrap support for B3LAL7 as seed ortholog is 100%.

Group of orthologs #255. Best score 306 bits
Score difference with first non-orthologous sequence - C.reinhardtii:306 P.knowlesi:306

A8IKA1              	100.00%		B3L0S1              	100.00%
Bootstrap support for A8IKA1 as seed ortholog is 100%.
Bootstrap support for B3L0S1 as seed ortholog is 100%.

Group of orthologs #256. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:305 P.knowlesi:305

A8JCG5              	100.00%		B3L1L0              	100.00%
                    	       		B3L992              	99.73%
Bootstrap support for A8JCG5 as seed ortholog is 100%.
Bootstrap support for B3L1L0 as seed ortholog is 100%.

Group of orthologs #257. Best score 305 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.knowlesi:305

A8HPD2              	100.00%		B3L3R5              	100.00%
Bootstrap support for A8HPD2 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #258. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:304 P.knowlesi:304

A8IMP6              	100.00%		B3L4K6              	100.00%
Bootstrap support for A8IMP6 as seed ortholog is 100%.
Bootstrap support for B3L4K6 as seed ortholog is 100%.

Group of orthologs #259. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:304

A8IQM3              	100.00%		B3L6C5              	100.00%
Bootstrap support for A8IQM3 as seed ortholog is 94%.
Bootstrap support for B3L6C5 as seed ortholog is 100%.

Group of orthologs #260. Best score 304 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:105

A8JFV3              	100.00%		B3L1K2              	100.00%
Bootstrap support for A8JFV3 as seed ortholog is 98%.
Bootstrap support for B3L1K2 as seed ortholog is 99%.

Group of orthologs #261. Best score 303 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.knowlesi:159

A8JGT1              	100.00%		B3L6M6              	100.00%
Bootstrap support for A8JGT1 as seed ortholog is 85%.
Bootstrap support for B3L6M6 as seed ortholog is 99%.

Group of orthologs #262. Best score 302 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.knowlesi:173

A8ITS8              	100.00%		B3LC21              	100.00%
Bootstrap support for A8ITS8 as seed ortholog is 100%.
Bootstrap support for B3LC21 as seed ortholog is 100%.

Group of orthologs #263. Best score 301 bits
Score difference with first non-orthologous sequence - C.reinhardtii:301 P.knowlesi:112

A8JGX1              	100.00%		B3L067              	100.00%
Bootstrap support for A8JGX1 as seed ortholog is 100%.
Bootstrap support for B3L067 as seed ortholog is 99%.

Group of orthologs #264. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.knowlesi:300

A8J4L6              	100.00%		B3L828              	100.00%
A8J629              	34.49%		
Bootstrap support for A8J4L6 as seed ortholog is 100%.
Bootstrap support for B3L828 as seed ortholog is 100%.

Group of orthologs #265. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.knowlesi:300

A8IJG8              	100.00%		B3L0B5              	100.00%
Bootstrap support for A8IJG8 as seed ortholog is 100%.
Bootstrap support for B3L0B5 as seed ortholog is 100%.

Group of orthologs #266. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:300 P.knowlesi:300

A8INT0              	100.00%		B3LAW4              	100.00%
Bootstrap support for A8INT0 as seed ortholog is 100%.
Bootstrap support for B3LAW4 as seed ortholog is 100%.

Group of orthologs #267. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:140

A8IWK9              	100.00%		B3L9V4              	100.00%
Bootstrap support for A8IWK9 as seed ortholog is 97%.
Bootstrap support for B3L9V4 as seed ortholog is 99%.

Group of orthologs #268. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.knowlesi:129

A8J195              	100.00%		B3LCV2              	100.00%
Bootstrap support for A8J195 as seed ortholog is 100%.
Bootstrap support for B3LCV2 as seed ortholog is 100%.

Group of orthologs #269. Best score 300 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.knowlesi:211

A8JGU0              	100.00%		B3L6A1              	100.00%
Bootstrap support for A8JGU0 as seed ortholog is 99%.
Bootstrap support for B3L6A1 as seed ortholog is 100%.

Group of orthologs #270. Best score 299 bits
Score difference with first non-orthologous sequence - C.reinhardtii:299 P.knowlesi:299

A8IIS1              	100.00%		B3L9T7              	100.00%
Bootstrap support for A8IIS1 as seed ortholog is 100%.
Bootstrap support for B3L9T7 as seed ortholog is 100%.

Group of orthologs #271. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.knowlesi:226

A8IL29              	100.00%		B3L1W8              	100.00%
Bootstrap support for A8IL29 as seed ortholog is 99%.
Bootstrap support for B3L1W8 as seed ortholog is 100%.

Group of orthologs #272. Best score 298 bits
Score difference with first non-orthologous sequence - C.reinhardtii:298 P.knowlesi:298

A8I4P5              	100.00%		B3L9A1              	100.00%
Bootstrap support for A8I4P5 as seed ortholog is 100%.
Bootstrap support for B3L9A1 as seed ortholog is 100%.

Group of orthologs #273. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 P.knowlesi:297

A8IZE7              	100.00%		B3L212              	100.00%
Bootstrap support for A8IZE7 as seed ortholog is 100%.
Bootstrap support for B3L212 as seed ortholog is 100%.

Group of orthologs #274. Best score 297 bits
Score difference with first non-orthologous sequence - C.reinhardtii:297 P.knowlesi:297

A8J5W3              	100.00%		B3L2A8              	100.00%
Bootstrap support for A8J5W3 as seed ortholog is 100%.
Bootstrap support for B3L2A8 as seed ortholog is 100%.

Group of orthologs #275. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:295 P.knowlesi:295

A8I629              	100.00%		B3L752              	100.00%
Bootstrap support for A8I629 as seed ortholog is 100%.
Bootstrap support for B3L752 as seed ortholog is 100%.

Group of orthologs #276. Best score 295 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.knowlesi:206

A8IRX5              	100.00%		B3L4Y0              	100.00%
Bootstrap support for A8IRX5 as seed ortholog is 100%.
Bootstrap support for B3L4Y0 as seed ortholog is 100%.

Group of orthologs #277. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.knowlesi:55

A8IL68              	100.00%		B3L2B7              	100.00%
Bootstrap support for A8IL68 as seed ortholog is 99%.
Bootstrap support for B3L2B7 as seed ortholog is 87%.

Group of orthologs #278. Best score 294 bits
Score difference with first non-orthologous sequence - C.reinhardtii:294 P.knowlesi:294

A8J2I5              	100.00%		B3L0A6              	100.00%
Bootstrap support for A8J2I5 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.

Group of orthologs #279. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.knowlesi:203

A8JGV6              	100.00%		B3L1B8              	100.00%
Q7X7A7              	17.35%		
Bootstrap support for A8JGV6 as seed ortholog is 100%.
Bootstrap support for B3L1B8 as seed ortholog is 100%.

Group of orthologs #280. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:292 P.knowlesi:292

A8HQU3              	100.00%		B3LC55              	100.00%
Bootstrap support for A8HQU3 as seed ortholog is 100%.
Bootstrap support for B3LC55 as seed ortholog is 100%.

Group of orthologs #281. Best score 292 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:132

A8IRS1              	100.00%		B3L646              	100.00%
Bootstrap support for A8IRS1 as seed ortholog is 99%.
Bootstrap support for B3L646 as seed ortholog is 98%.

Group of orthologs #282. Best score 290 bits
Score difference with first non-orthologous sequence - C.reinhardtii:290 P.knowlesi:290

A8HQF0              	100.00%		B3L4Q7              	100.00%
Bootstrap support for A8HQF0 as seed ortholog is 100%.
Bootstrap support for B3L4Q7 as seed ortholog is 100%.

Group of orthologs #283. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.knowlesi:289

A8IZI8              	100.00%		B3L2D0              	100.00%
Bootstrap support for A8IZI8 as seed ortholog is 100%.
Bootstrap support for B3L2D0 as seed ortholog is 100%.

Group of orthologs #284. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:289 P.knowlesi:289

A8JAG5              	100.00%		B3LCP1              	100.00%
Bootstrap support for A8JAG5 as seed ortholog is 100%.
Bootstrap support for B3LCP1 as seed ortholog is 100%.

Group of orthologs #285. Best score 289 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.knowlesi:289

Q84X74              	100.00%		B3LB10              	100.00%
Bootstrap support for Q84X74 as seed ortholog is 100%.
Bootstrap support for B3LB10 as seed ortholog is 100%.

Group of orthologs #286. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.knowlesi:195

A8J1B6              	100.00%		B3L2D4              	100.00%
Bootstrap support for A8J1B6 as seed ortholog is 99%.
Bootstrap support for B3L2D4 as seed ortholog is 100%.

Group of orthologs #287. Best score 288 bits
Score difference with first non-orthologous sequence - C.reinhardtii:288 P.knowlesi:288

A8J825              	100.00%		B3LAR4              	100.00%
Bootstrap support for A8J825 as seed ortholog is 100%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #288. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:217 P.knowlesi:161

A8HPL8              	100.00%		B3L1E7              	100.00%
Bootstrap support for A8HPL8 as seed ortholog is 99%.
Bootstrap support for B3L1E7 as seed ortholog is 99%.

Group of orthologs #289. Best score 287 bits
Score difference with first non-orthologous sequence - C.reinhardtii:287 P.knowlesi:287

A8J027              	100.00%		B3L5I1              	100.00%
Bootstrap support for A8J027 as seed ortholog is 100%.
Bootstrap support for B3L5I1 as seed ortholog is 100%.

Group of orthologs #290. Best score 285 bits
Score difference with first non-orthologous sequence - C.reinhardtii:285 P.knowlesi:285

A8J4X1              	100.00%		B3LDE8              	100.00%
Bootstrap support for A8J4X1 as seed ortholog is 100%.
Bootstrap support for B3LDE8 as seed ortholog is 100%.

Group of orthologs #291. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:283 P.knowlesi:283

A8IW43              	100.00%		B3LC99              	100.00%
A8I7H0              	9.29%		
A8JHY5              	6.56%		
Bootstrap support for A8IW43 as seed ortholog is 100%.
Bootstrap support for B3LC99 as seed ortholog is 100%.

Group of orthologs #292. Best score 283 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:122

A8IZ93              	100.00%		B3L8Y4              	100.00%
Bootstrap support for A8IZ93 as seed ortholog is 100%.
Bootstrap support for B3L8Y4 as seed ortholog is 99%.

Group of orthologs #293. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.knowlesi:163

A8JC09              	100.00%		B3L520              	100.00%
A8HQY2              	13.87%		
Bootstrap support for A8JC09 as seed ortholog is 82%.
Bootstrap support for B3L520 as seed ortholog is 99%.

Group of orthologs #294. Best score 282 bits
Score difference with first non-orthologous sequence - C.reinhardtii:282 P.knowlesi:282

A8IRV6              	100.00%		B3L691              	100.00%
Bootstrap support for A8IRV6 as seed ortholog is 100%.
Bootstrap support for B3L691 as seed ortholog is 100%.

Group of orthologs #295. Best score 281 bits
Score difference with first non-orthologous sequence - C.reinhardtii:281 P.knowlesi:281

A8J5E0              	100.00%		B3L9C8              	100.00%
Bootstrap support for A8J5E0 as seed ortholog is 100%.
Bootstrap support for B3L9C8 as seed ortholog is 100%.

Group of orthologs #296. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:99

A8IRT2              	100.00%		B3LC19              	100.00%
Bootstrap support for A8IRT2 as seed ortholog is 100%.
Bootstrap support for B3LC19 as seed ortholog is 99%.

Group of orthologs #297. Best score 280 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.knowlesi:280

A8JF74              	100.00%		B3LBA1              	100.00%
Bootstrap support for A8JF74 as seed ortholog is 94%.
Bootstrap support for B3LBA1 as seed ortholog is 100%.

Group of orthologs #298. Best score 279 bits
Score difference with first non-orthologous sequence - C.reinhardtii:279 P.knowlesi:279

A8J399              	100.00%		B3L8I7              	100.00%
A8ILT7              	46.47%		
A8J993              	26.87%		
A8J0U2              	26.03%		
A8J0U4              	25.50%		
A8J0U1              	24.97%		
A8J0U0              	24.87%		
A8JH07              	19.49%		
Q8LP67              	19.39%		
A8JJL0              	10.75%		
A8ILI7              	8.11%		
Bootstrap support for A8J399 as seed ortholog is 100%.
Bootstrap support for B3L8I7 as seed ortholog is 100%.

Group of orthologs #299. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 P.knowlesi:278

A8HUA7              	100.00%		B3L7E2              	100.00%
A8HUA1              	75.62%		
Bootstrap support for A8HUA7 as seed ortholog is 100%.
Bootstrap support for B3L7E2 as seed ortholog is 100%.

Group of orthologs #300. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 P.knowlesi:278

A8JI52              	100.00%		B3L430              	100.00%
Bootstrap support for A8JI52 as seed ortholog is 100%.
Bootstrap support for B3L430 as seed ortholog is 100%.

Group of orthologs #301. Best score 278 bits
Score difference with first non-orthologous sequence - C.reinhardtii:278 P.knowlesi:278

A8JCW5              	100.00%		B3L9V6              	100.00%
Bootstrap support for A8JCW5 as seed ortholog is 100%.
Bootstrap support for B3L9V6 as seed ortholog is 100%.

Group of orthologs #302. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:276 P.knowlesi:276

A8IF80              	100.00%		B3L504              	100.00%
Bootstrap support for A8IF80 as seed ortholog is 100%.
Bootstrap support for B3L504 as seed ortholog is 100%.

Group of orthologs #303. Best score 276 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.knowlesi:276

A8IQC5              	100.00%		B3LBB4              	100.00%
Bootstrap support for A8IQC5 as seed ortholog is 100%.
Bootstrap support for B3LBB4 as seed ortholog is 100%.

Group of orthologs #304. Best score 274 bits
Score difference with first non-orthologous sequence - C.reinhardtii:167 P.knowlesi:274

A8I9S6              	100.00%		B3L4B2              	100.00%
Bootstrap support for A8I9S6 as seed ortholog is 99%.
Bootstrap support for B3L4B2 as seed ortholog is 100%.

Group of orthologs #305. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 P.knowlesi:273

A8JGX0              	100.00%		B3L598              	100.00%
Bootstrap support for A8JGX0 as seed ortholog is 100%.
Bootstrap support for B3L598 as seed ortholog is 100%.

Group of orthologs #306. Best score 273 bits
Score difference with first non-orthologous sequence - C.reinhardtii:273 P.knowlesi:273

A8JEW4              	100.00%		B3L7X1              	100.00%
Bootstrap support for A8JEW4 as seed ortholog is 100%.
Bootstrap support for B3L7X1 as seed ortholog is 100%.

Group of orthologs #307. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.knowlesi:272

A8HYC0              	100.00%		B3KZC4              	100.00%
Bootstrap support for A8HYC0 as seed ortholog is 100%.
Bootstrap support for B3KZC4 as seed ortholog is 100%.

Group of orthologs #308. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.knowlesi:272

A8I7S0              	100.00%		B3L1F7              	100.00%
Bootstrap support for A8I7S0 as seed ortholog is 100%.
Bootstrap support for B3L1F7 as seed ortholog is 100%.

Group of orthologs #309. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.knowlesi:272

A8J5W8              	100.00%		B3L0G0              	100.00%
Bootstrap support for A8J5W8 as seed ortholog is 100%.
Bootstrap support for B3L0G0 as seed ortholog is 100%.

Group of orthologs #310. Best score 272 bits
Score difference with first non-orthologous sequence - C.reinhardtii:272 P.knowlesi:272

A8JGF8              	100.00%		B3L665              	100.00%
Bootstrap support for A8JGF8 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #311. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:271 P.knowlesi:271

A8HRF8              	100.00%		B3LCC3              	100.00%
Bootstrap support for A8HRF8 as seed ortholog is 100%.
Bootstrap support for B3LCC3 as seed ortholog is 100%.

Group of orthologs #312. Best score 271 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:142

A8ILX2              	100.00%		B3L342              	100.00%
Bootstrap support for A8ILX2 as seed ortholog is 100%.
Bootstrap support for B3L342 as seed ortholog is 100%.

Group of orthologs #313. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.knowlesi:270

A8J3F7              	100.00%		B3L152              	100.00%
Bootstrap support for A8J3F7 as seed ortholog is 99%.
Bootstrap support for B3L152 as seed ortholog is 100%.

Group of orthologs #314. Best score 270 bits
Score difference with first non-orthologous sequence - C.reinhardtii:270 P.knowlesi:270

A8J5Z0              	100.00%		B3L5A9              	100.00%
Bootstrap support for A8J5Z0 as seed ortholog is 100%.
Bootstrap support for B3L5A9 as seed ortholog is 100%.

Group of orthologs #315. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.knowlesi:269

A8HYQ9              	100.00%		B3L4Z6              	100.00%
Bootstrap support for A8HYQ9 as seed ortholog is 100%.
Bootstrap support for B3L4Z6 as seed ortholog is 100%.

Group of orthologs #316. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.knowlesi:269

A8IC90              	100.00%		B3L020              	100.00%
Bootstrap support for A8IC90 as seed ortholog is 100%.
Bootstrap support for B3L020 as seed ortholog is 100%.

Group of orthologs #317. Best score 269 bits
Score difference with first non-orthologous sequence - C.reinhardtii:269 P.knowlesi:269

A8J8T5              	100.00%		B3L3Y9              	100.00%
Bootstrap support for A8J8T5 as seed ortholog is 100%.
Bootstrap support for B3L3Y9 as seed ortholog is 100%.

Group of orthologs #318. Best score 267 bits
Score difference with first non-orthologous sequence - C.reinhardtii:267 P.knowlesi:267

A8JFW4              	100.00%		B3L8L9              	100.00%
Bootstrap support for A8JFW4 as seed ortholog is 100%.
Bootstrap support for B3L8L9 as seed ortholog is 100%.

Group of orthologs #319. Best score 266 bits
Score difference with first non-orthologous sequence - C.reinhardtii:266 P.knowlesi:266

A8JHC1              	100.00%		B3L9E8              	100.00%
Bootstrap support for A8JHC1 as seed ortholog is 100%.
Bootstrap support for B3L9E8 as seed ortholog is 100%.

Group of orthologs #320. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.knowlesi:265

A8JH50              	100.00%		B3L2P1              	100.00%
Bootstrap support for A8JH50 as seed ortholog is 100%.
Bootstrap support for B3L2P1 as seed ortholog is 100%.

Group of orthologs #321. Best score 265 bits
Score difference with first non-orthologous sequence - C.reinhardtii:265 P.knowlesi:265

A8JBN5              	100.00%		B3L830              	100.00%
Bootstrap support for A8JBN5 as seed ortholog is 100%.
Bootstrap support for B3L830 as seed ortholog is 100%.

Group of orthologs #322. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.knowlesi:264

A8IB25              	100.00%		B3L230              	100.00%
Bootstrap support for A8IB25 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #323. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.knowlesi:264

A8I4T2              	100.00%		B3LA05              	100.00%
Bootstrap support for A8I4T2 as seed ortholog is 100%.
Bootstrap support for B3LA05 as seed ortholog is 100%.

Group of orthologs #324. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.knowlesi:264

A8IDY0              	100.00%		B3L9B3              	100.00%
Bootstrap support for A8IDY0 as seed ortholog is 100%.
Bootstrap support for B3L9B3 as seed ortholog is 100%.

Group of orthologs #325. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.knowlesi:130

A8JB50              	100.00%		B3L322              	100.00%
Bootstrap support for A8JB50 as seed ortholog is 87%.
Bootstrap support for B3L322 as seed ortholog is 99%.

Group of orthologs #326. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:264 P.knowlesi:264

A8J4I7              	100.00%		B3LAM7              	100.00%
Bootstrap support for A8J4I7 as seed ortholog is 100%.
Bootstrap support for B3LAM7 as seed ortholog is 100%.

Group of orthologs #327. Best score 264 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.knowlesi:42

A8JHQ7              	100.00%		B3L6D9              	100.00%
Bootstrap support for A8JHQ7 as seed ortholog is 96%.
Bootstrap support for B3L6D9 as seed ortholog is 96%.

Group of orthologs #328. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.knowlesi:263

A8HY93              	100.00%		B3LAH8              	100.00%
Bootstrap support for A8HY93 as seed ortholog is 100%.
Bootstrap support for B3LAH8 as seed ortholog is 100%.

Group of orthologs #329. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.knowlesi:263

A8J0Y4              	100.00%		B3L3N6              	100.00%
Bootstrap support for A8J0Y4 as seed ortholog is 87%.
Bootstrap support for B3L3N6 as seed ortholog is 100%.

Group of orthologs #330. Best score 263 bits
Score difference with first non-orthologous sequence - C.reinhardtii:263 P.knowlesi:263

A8J5Y9              	100.00%		B3L7D0              	100.00%
Bootstrap support for A8J5Y9 as seed ortholog is 100%.
Bootstrap support for B3L7D0 as seed ortholog is 100%.

Group of orthologs #331. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:261

A8ICN2              	100.00%		B3L4U8              	100.00%
A8HNN4              	54.61%		B3LCF6              	11.11%
A8HNN6              	53.03%		
Bootstrap support for A8ICN2 as seed ortholog is 100%.
Bootstrap support for B3L4U8 as seed ortholog is 100%.

Group of orthologs #332. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:261 P.knowlesi:261

A8ICB3              	100.00%		B3L8V3              	100.00%
Bootstrap support for A8ICB3 as seed ortholog is 100%.
Bootstrap support for B3L8V3 as seed ortholog is 100%.

Group of orthologs #333. Best score 261 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.knowlesi:261

A8J1F4              	100.00%		B3L228              	100.00%
Bootstrap support for A8J1F4 as seed ortholog is 75%.
Bootstrap support for B3L228 as seed ortholog is 100%.

Group of orthologs #334. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.knowlesi:260

A8HWK6              	100.00%		B3LB03              	100.00%
Bootstrap support for A8HWK6 as seed ortholog is 100%.
Bootstrap support for B3LB03 as seed ortholog is 100%.

Group of orthologs #335. Best score 260 bits
Score difference with first non-orthologous sequence - C.reinhardtii:260 P.knowlesi:260

A8JBB2              	100.00%		B3L4N0              	100.00%
Bootstrap support for A8JBB2 as seed ortholog is 100%.
Bootstrap support for B3L4N0 as seed ortholog is 100%.

Group of orthologs #336. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.knowlesi:76

A8IKE3              	100.00%		B3L4U0              	100.00%
A8IKD6              	72.06%		
Q9FXT7              	37.19%		
A8JI35              	8.67%		
Bootstrap support for A8IKE3 as seed ortholog is 97%.
Bootstrap support for B3L4U0 as seed ortholog is 98%.

Group of orthologs #337. Best score 259 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.knowlesi:259

A8JCK1              	100.00%		B3L7E4              	100.00%
A8JEF7              	18.78%		
Bootstrap support for A8JCK1 as seed ortholog is 69%.
Alternative seed ortholog is A8IG50 (24 bits away from this cluster)
Bootstrap support for B3L7E4 as seed ortholog is 100%.

Group of orthologs #338. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.knowlesi:258

A8J8V5              	100.00%		B3L3E0              	100.00%
Bootstrap support for A8J8V5 as seed ortholog is 100%.
Bootstrap support for B3L3E0 as seed ortholog is 100%.

Group of orthologs #339. Best score 258 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.knowlesi:137

A8JBJ3              	100.00%		B3LB25              	100.00%
Bootstrap support for A8JBJ3 as seed ortholog is 99%.
Bootstrap support for B3LB25 as seed ortholog is 100%.

Group of orthologs #340. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:257 P.knowlesi:257

A8ILL5              	100.00%		B3KZR6              	100.00%
Bootstrap support for A8ILL5 as seed ortholog is 100%.
Bootstrap support for B3KZR6 as seed ortholog is 100%.

Group of orthologs #341. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.knowlesi:257

A8IL38              	100.00%		B3L8A8              	100.00%
Bootstrap support for A8IL38 as seed ortholog is 99%.
Bootstrap support for B3L8A8 as seed ortholog is 100%.

Group of orthologs #342. Best score 257 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.knowlesi:257

A8JIS8              	100.00%		B3LAC7              	100.00%
Bootstrap support for A8JIS8 as seed ortholog is 61%.
Alternative seed ortholog is A8IVZ2 (18 bits away from this cluster)
Bootstrap support for B3LAC7 as seed ortholog is 100%.

Group of orthologs #343. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:255 P.knowlesi:255

A8HM54              	100.00%		B3L4Y1              	100.00%
Bootstrap support for A8HM54 as seed ortholog is 100%.
Bootstrap support for B3L4Y1 as seed ortholog is 100%.

Group of orthologs #344. Best score 255 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.knowlesi:255

A8I274              	100.00%		B3LAY5              	100.00%
Bootstrap support for A8I274 as seed ortholog is 100%.
Bootstrap support for B3LAY5 as seed ortholog is 100%.

Group of orthologs #345. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:254 P.knowlesi:254

A8II74              	100.00%		B3L4L9              	100.00%
Bootstrap support for A8II74 as seed ortholog is 100%.
Bootstrap support for B3L4L9 as seed ortholog is 100%.

Group of orthologs #346. Best score 254 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.knowlesi:139

A8IDP6              	100.00%		B3LBF2              	100.00%
Bootstrap support for A8IDP6 as seed ortholog is 99%.
Bootstrap support for B3LBF2 as seed ortholog is 100%.

Group of orthologs #347. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.knowlesi:253

A8HMQ7              	100.00%		B3LAK2              	100.00%
Bootstrap support for A8HMQ7 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 100%.

Group of orthologs #348. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.knowlesi:253

A8J6K9              	100.00%		B3KZR0              	100.00%
Bootstrap support for A8J6K9 as seed ortholog is 100%.
Bootstrap support for B3KZR0 as seed ortholog is 100%.

Group of orthologs #349. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.knowlesi:253

A8J6I8              	100.00%		B3LA14              	100.00%
Bootstrap support for A8J6I8 as seed ortholog is 100%.
Bootstrap support for B3LA14 as seed ortholog is 100%.

Group of orthologs #350. Best score 253 bits
Score difference with first non-orthologous sequence - C.reinhardtii:253 P.knowlesi:253

A8JDN9              	100.00%		B3L3C0              	100.00%
Bootstrap support for A8JDN9 as seed ortholog is 100%.
Bootstrap support for B3L3C0 as seed ortholog is 100%.

Group of orthologs #351. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.knowlesi:252

A8HQ81              	100.00%		B3L086              	100.00%
Bootstrap support for A8HQ81 as seed ortholog is 100%.
Bootstrap support for B3L086 as seed ortholog is 100%.

Group of orthologs #352. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.knowlesi:252

A8HQI6              	100.00%		B3L786              	100.00%
Bootstrap support for A8HQI6 as seed ortholog is 100%.
Bootstrap support for B3L786 as seed ortholog is 100%.

Group of orthologs #353. Best score 252 bits
Score difference with first non-orthologous sequence - C.reinhardtii:252 P.knowlesi:173

A8J4N7              	100.00%		B3L5J3              	100.00%
Bootstrap support for A8J4N7 as seed ortholog is 100%.
Bootstrap support for B3L5J3 as seed ortholog is 99%.

Group of orthologs #354. Best score 251 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.knowlesi:251

A8J3F6              	100.00%		B3L8C3              	100.00%
Bootstrap support for A8J3F6 as seed ortholog is 100%.
Bootstrap support for B3L8C3 as seed ortholog is 100%.

Group of orthologs #355. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.knowlesi:250

A8HMG4              	100.00%		B3L9A7              	100.00%
Bootstrap support for A8HMG4 as seed ortholog is 100%.
Bootstrap support for B3L9A7 as seed ortholog is 100%.

Group of orthologs #356. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.knowlesi:86

A8J018              	100.00%		B3LAT1              	100.00%
Bootstrap support for A8J018 as seed ortholog is 100%.
Bootstrap support for B3LAT1 as seed ortholog is 61%.
Alternative seed ortholog is B3L315 (86 bits away from this cluster)

Group of orthologs #357. Best score 250 bits
Score difference with first non-orthologous sequence - C.reinhardtii:250 P.knowlesi:250

A8JD37              	100.00%		B3L5R4              	100.00%
Bootstrap support for A8JD37 as seed ortholog is 100%.
Bootstrap support for B3L5R4 as seed ortholog is 100%.

Group of orthologs #358. Best score 249 bits
Score difference with first non-orthologous sequence - C.reinhardtii:249 P.knowlesi:111

A8I9J2              	100.00%		B3L6N0              	100.00%
Bootstrap support for A8I9J2 as seed ortholog is 100%.
Bootstrap support for B3L6N0 as seed ortholog is 99%.

Group of orthologs #359. Best score 248 bits
Score difference with first non-orthologous sequence - C.reinhardtii:248 P.knowlesi:248

A8JFI7              	100.00%		B3L7Q3              	100.00%
Bootstrap support for A8JFI7 as seed ortholog is 100%.
Bootstrap support for B3L7Q3 as seed ortholog is 100%.

Group of orthologs #360. Best score 247 bits
Score difference with first non-orthologous sequence - C.reinhardtii:247 P.knowlesi:247

A8HYL2              	100.00%		B3L0H3              	100.00%
Bootstrap support for A8HYL2 as seed ortholog is 100%.
Bootstrap support for B3L0H3 as seed ortholog is 100%.

Group of orthologs #361. Best score 245 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.knowlesi:245

A8ITJ3              	100.00%		B3LAN0              	100.00%
Bootstrap support for A8ITJ3 as seed ortholog is 100%.
Bootstrap support for B3LAN0 as seed ortholog is 100%.

Group of orthologs #362. Best score 244 bits
Score difference with first non-orthologous sequence - C.reinhardtii:244 P.knowlesi:244

A8IAX2              	100.00%		B3L7F1              	100.00%
Bootstrap support for A8IAX2 as seed ortholog is 100%.
Bootstrap support for B3L7F1 as seed ortholog is 100%.

Group of orthologs #363. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:137 P.knowlesi:185

A8HZ26              	100.00%		B3L1F8              	100.00%
Bootstrap support for A8HZ26 as seed ortholog is 99%.
Bootstrap support for B3L1F8 as seed ortholog is 99%.

Group of orthologs #364. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.knowlesi:243

A8HTX3              	100.00%		B3L5A0              	100.00%
Bootstrap support for A8HTX3 as seed ortholog is 100%.
Bootstrap support for B3L5A0 as seed ortholog is 100%.

Group of orthologs #365. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.knowlesi:243

A8HP55              	100.00%		B3LAE0              	100.00%
Bootstrap support for A8HP55 as seed ortholog is 100%.
Bootstrap support for B3LAE0 as seed ortholog is 100%.

Group of orthologs #366. Best score 243 bits
Score difference with first non-orthologous sequence - C.reinhardtii:243 P.knowlesi:243

A8ID63              	100.00%		B3L787              	100.00%
Bootstrap support for A8ID63 as seed ortholog is 100%.
Bootstrap support for B3L787 as seed ortholog is 100%.

Group of orthologs #367. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.knowlesi:242

A8IP78              	100.00%		B3L2R4              	100.00%
Bootstrap support for A8IP78 as seed ortholog is 100%.
Bootstrap support for B3L2R4 as seed ortholog is 100%.

Group of orthologs #368. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.knowlesi:242

A8IYD3              	100.00%		B3LB36              	100.00%
Bootstrap support for A8IYD3 as seed ortholog is 100%.
Bootstrap support for B3LB36 as seed ortholog is 100%.

Group of orthologs #369. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.knowlesi:242

A8J339              	100.00%		B3LC53              	100.00%
Bootstrap support for A8J339 as seed ortholog is 100%.
Bootstrap support for B3LC53 as seed ortholog is 100%.

Group of orthologs #370. Best score 242 bits
Score difference with first non-orthologous sequence - C.reinhardtii:242 P.knowlesi:242

A8JGD2              	100.00%		B3L2G8              	100.00%
Bootstrap support for A8JGD2 as seed ortholog is 100%.
Bootstrap support for B3L2G8 as seed ortholog is 100%.

Group of orthologs #371. Best score 241 bits
Score difference with first non-orthologous sequence - C.reinhardtii:241 P.knowlesi:158

A8IVI0              	100.00%		B3L2N7              	100.00%
Bootstrap support for A8IVI0 as seed ortholog is 100%.
Bootstrap support for B3L2N7 as seed ortholog is 99%.

Group of orthologs #372. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.knowlesi:106

A8IK09              	100.00%		B3L7M9              	100.00%
A8HSA7              	100.00%		B3L7V1              	100.00%
A8J9M0              	100.00%		
A8HWY2              	90.91%		
Bootstrap support for A8IK09 as seed ortholog is 99%.
Bootstrap support for A8HSA7 as seed ortholog is 99%.
Bootstrap support for A8J9M0 as seed ortholog is 99%.
Bootstrap support for B3L7M9 as seed ortholog is 100%.
Bootstrap support for B3L7V1 as seed ortholog is 100%.

Group of orthologs #373. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.knowlesi:240

A8HXQ8              	100.00%		B3KZH6              	100.00%
Bootstrap support for A8HXQ8 as seed ortholog is 100%.
Bootstrap support for B3KZH6 as seed ortholog is 100%.

Group of orthologs #374. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.knowlesi:240

A8I1A7              	100.00%		B3L3Q4              	100.00%
Bootstrap support for A8I1A7 as seed ortholog is 100%.
Bootstrap support for B3L3Q4 as seed ortholog is 100%.

Group of orthologs #375. Best score 240 bits
Score difference with first non-orthologous sequence - C.reinhardtii:240 P.knowlesi:191

A8ILF4              	100.00%		B3L7N3              	100.00%
Bootstrap support for A8ILF4 as seed ortholog is 100%.
Bootstrap support for B3L7N3 as seed ortholog is 99%.

Group of orthologs #376. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.knowlesi:239

A8I5X1              	100.00%		B3LA31              	100.00%
Bootstrap support for A8I5X1 as seed ortholog is 100%.
Bootstrap support for B3LA31 as seed ortholog is 100%.

Group of orthologs #377. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:239 P.knowlesi:239

A8IWK3              	100.00%		B3L7V3              	100.00%
Bootstrap support for A8IWK3 as seed ortholog is 100%.
Bootstrap support for B3L7V3 as seed ortholog is 100%.

Group of orthologs #378. Best score 239 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.knowlesi:193

A8JC30              	100.00%		B3L1J2              	100.00%
Bootstrap support for A8JC30 as seed ortholog is 100%.
Bootstrap support for B3L1J2 as seed ortholog is 100%.

Group of orthologs #379. Best score 238 bits
Score difference with first non-orthologous sequence - C.reinhardtii:238 P.knowlesi:238

A8JCM8              	100.00%		B3L0I9              	100.00%
Bootstrap support for A8JCM8 as seed ortholog is 100%.
Bootstrap support for B3L0I9 as seed ortholog is 100%.

Group of orthologs #380. Best score 237 bits
Score difference with first non-orthologous sequence - C.reinhardtii:237 P.knowlesi:237

A8JCR0              	100.00%		B3LCV6              	100.00%
Bootstrap support for A8JCR0 as seed ortholog is 100%.
Bootstrap support for B3LCV6 as seed ortholog is 100%.

Group of orthologs #381. Best score 236 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.knowlesi:102

A8IRR7              	100.00%		B3L0A3              	100.00%
Bootstrap support for A8IRR7 as seed ortholog is 86%.
Bootstrap support for B3L0A3 as seed ortholog is 99%.

Group of orthologs #382. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:106

A8IVQ7              	100.00%		B3KZA2              	100.00%
Bootstrap support for A8IVQ7 as seed ortholog is 99%.
Bootstrap support for B3KZA2 as seed ortholog is 99%.

Group of orthologs #383. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:235 P.knowlesi:235

A8IWJ3              	100.00%		B3L6W6              	100.00%
Bootstrap support for A8IWJ3 as seed ortholog is 100%.
Bootstrap support for B3L6W6 as seed ortholog is 100%.

Group of orthologs #384. Best score 235 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.knowlesi:235

A8J6H8              	100.00%		B3L632              	100.00%
Bootstrap support for A8J6H8 as seed ortholog is 99%.
Bootstrap support for B3L632 as seed ortholog is 100%.

Group of orthologs #385. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:233

Q948T5              	100.00%		B3LC44              	100.00%
A8IG47              	14.45%		
Bootstrap support for Q948T5 as seed ortholog is 99%.
Bootstrap support for B3LC44 as seed ortholog is 100%.

Group of orthologs #386. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.knowlesi:233

A8HTX4              	100.00%		B3L0B9              	100.00%
Bootstrap support for A8HTX4 as seed ortholog is 100%.
Bootstrap support for B3L0B9 as seed ortholog is 100%.

Group of orthologs #387. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.knowlesi:233

A8HXK0              	100.00%		B3L629              	100.00%
Bootstrap support for A8HXK0 as seed ortholog is 100%.
Bootstrap support for B3L629 as seed ortholog is 100%.

Group of orthologs #388. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:233 P.knowlesi:233

A8IKZ2              	100.00%		B3L8I5              	100.00%
Bootstrap support for A8IKZ2 as seed ortholog is 100%.
Bootstrap support for B3L8I5 as seed ortholog is 100%.

Group of orthologs #389. Best score 233 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.knowlesi:233

A8J768              	100.00%		B3L6A6              	100.00%
Bootstrap support for A8J768 as seed ortholog is 100%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #390. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:232 P.knowlesi:232

A8IGM2              	100.00%		B3L2Z8              	100.00%
Bootstrap support for A8IGM2 as seed ortholog is 100%.
Bootstrap support for B3L2Z8 as seed ortholog is 100%.

Group of orthologs #391. Best score 232 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:232

A8IJE8              	100.00%		B3L2K3              	100.00%
Bootstrap support for A8IJE8 as seed ortholog is 95%.
Bootstrap support for B3L2K3 as seed ortholog is 100%.

Group of orthologs #392. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:181 P.knowlesi:230

A8J2N5              	100.00%		B3L5M0              	100.00%
Bootstrap support for A8J2N5 as seed ortholog is 100%.
Bootstrap support for B3L5M0 as seed ortholog is 100%.

Group of orthologs #393. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.knowlesi:42

A8JC40              	100.00%		B3KZK4              	100.00%
Bootstrap support for A8JC40 as seed ortholog is 100%.
Bootstrap support for B3KZK4 as seed ortholog is 98%.

Group of orthologs #394. Best score 230 bits
Score difference with first non-orthologous sequence - C.reinhardtii:230 P.knowlesi:230

A8JIU5              	100.00%		B3L9D4              	100.00%
Bootstrap support for A8JIU5 as seed ortholog is 100%.
Bootstrap support for B3L9D4 as seed ortholog is 100%.

Group of orthologs #395. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 P.knowlesi:229

A8IJK3              	100.00%		B3L5D4              	100.00%
Bootstrap support for A8IJK3 as seed ortholog is 100%.
Bootstrap support for B3L5D4 as seed ortholog is 100%.

Group of orthologs #396. Best score 229 bits
Score difference with first non-orthologous sequence - C.reinhardtii:229 P.knowlesi:32

A8J5R1              	100.00%		B3L8T8              	100.00%
Bootstrap support for A8J5R1 as seed ortholog is 100%.
Bootstrap support for B3L8T8 as seed ortholog is 78%.

Group of orthologs #397. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.knowlesi:228

A8J0V5              	100.00%		B3L0W6              	100.00%
Bootstrap support for A8J0V5 as seed ortholog is 100%.
Bootstrap support for B3L0W6 as seed ortholog is 100%.

Group of orthologs #398. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.knowlesi:228

A8J0I7              	100.00%		B3L640              	100.00%
Bootstrap support for A8J0I7 as seed ortholog is 100%.
Bootstrap support for B3L640 as seed ortholog is 100%.

Group of orthologs #399. Best score 228 bits
Score difference with first non-orthologous sequence - C.reinhardtii:228 P.knowlesi:133

A8IYT7              	100.00%		B3LBU1              	100.00%
Bootstrap support for A8IYT7 as seed ortholog is 100%.
Bootstrap support for B3LBU1 as seed ortholog is 99%.

Group of orthologs #400. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.knowlesi:227

A8HME7              	100.00%		B3L2P9              	100.00%
Bootstrap support for A8HME7 as seed ortholog is 100%.
Bootstrap support for B3L2P9 as seed ortholog is 100%.

Group of orthologs #401. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.knowlesi:117

A8IAK4              	100.00%		B3L826              	100.00%
Bootstrap support for A8IAK4 as seed ortholog is 100%.
Bootstrap support for B3L826 as seed ortholog is 99%.

Group of orthologs #402. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:110

A8J7F6              	100.00%		B3L1W6              	100.00%
Bootstrap support for A8J7F6 as seed ortholog is 96%.
Bootstrap support for B3L1W6 as seed ortholog is 99%.

Group of orthologs #403. Best score 227 bits
Score difference with first non-orthologous sequence - C.reinhardtii:227 P.knowlesi:227

A8J2Z6              	100.00%		B3L7H9              	100.00%
Bootstrap support for A8J2Z6 as seed ortholog is 100%.
Bootstrap support for B3L7H9 as seed ortholog is 100%.

Group of orthologs #404. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:226 P.knowlesi:226

A8HTE5              	100.00%		B3L4D2              	100.00%
Bootstrap support for A8HTE5 as seed ortholog is 100%.
Bootstrap support for B3L4D2 as seed ortholog is 100%.

Group of orthologs #405. Best score 226 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.knowlesi:226

Q8HTL2              	100.00%		B3L5D5              	100.00%
Bootstrap support for Q8HTL2 as seed ortholog is 81%.
Bootstrap support for B3L5D5 as seed ortholog is 100%.

Group of orthologs #406. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.knowlesi:225

A8IN95              	100.00%		B3LA43              	100.00%
Bootstrap support for A8IN95 as seed ortholog is 100%.
Bootstrap support for B3LA43 as seed ortholog is 100%.

Group of orthologs #407. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.knowlesi:225

A8IY85              	100.00%		B3L986              	100.00%
Bootstrap support for A8IY85 as seed ortholog is 100%.
Bootstrap support for B3L986 as seed ortholog is 100%.

Group of orthologs #408. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:142

A8J8C2              	100.00%		B3L749              	100.00%
Bootstrap support for A8J8C2 as seed ortholog is 98%.
Bootstrap support for B3L749 as seed ortholog is 99%.

Group of orthologs #409. Best score 225 bits
Score difference with first non-orthologous sequence - C.reinhardtii:225 P.knowlesi:225

A8JGS3              	100.00%		B3L7E0              	100.00%
Bootstrap support for A8JGS3 as seed ortholog is 100%.
Bootstrap support for B3L7E0 as seed ortholog is 100%.

Group of orthologs #410. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.knowlesi:224

A8IJQ4              	100.00%		B3L4C7              	100.00%
Bootstrap support for A8IJQ4 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #411. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:224 P.knowlesi:224

A8I843              	100.00%		B3LBE4              	100.00%
Bootstrap support for A8I843 as seed ortholog is 100%.
Bootstrap support for B3LBE4 as seed ortholog is 100%.

Group of orthologs #412. Best score 224 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:224

A8IXB8              	100.00%		B3L1G8              	100.00%
Bootstrap support for A8IXB8 as seed ortholog is 98%.
Bootstrap support for B3L1G8 as seed ortholog is 100%.

Group of orthologs #413. Best score 223 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.knowlesi:223

A8HY75              	100.00%		B3L163              	100.00%
Bootstrap support for A8HY75 as seed ortholog is 99%.
Bootstrap support for B3L163 as seed ortholog is 100%.

Group of orthologs #414. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.knowlesi:222

A8J1G8              	100.00%		B3L8H9              	100.00%
Bootstrap support for A8J1G8 as seed ortholog is 100%.
Bootstrap support for B3L8H9 as seed ortholog is 100%.

Group of orthologs #415. Best score 222 bits
Score difference with first non-orthologous sequence - C.reinhardtii:222 P.knowlesi:163

O48949              	100.00%		B3L111              	100.00%
Bootstrap support for O48949 as seed ortholog is 100%.
Bootstrap support for B3L111 as seed ortholog is 99%.

Group of orthologs #416. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:221

A8HNG4              	100.00%		B3L789              	100.00%
Bootstrap support for A8HNG4 as seed ortholog is 100%.
Bootstrap support for B3L789 as seed ortholog is 100%.

Group of orthologs #417. Best score 221 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.knowlesi:41

A8JFI8              	100.00%		B3LC83              	100.00%
Bootstrap support for A8JFI8 as seed ortholog is 99%.
Bootstrap support for B3LC83 as seed ortholog is 95%.

Group of orthologs #418. Best score 220 bits
Score difference with first non-orthologous sequence - C.reinhardtii:220 P.knowlesi:220

A8IA18              	100.00%		B3L7Q9              	100.00%
Bootstrap support for A8IA18 as seed ortholog is 100%.
Bootstrap support for B3L7Q9 as seed ortholog is 100%.

Group of orthologs #419. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.knowlesi:64

A8J282              	100.00%		B3L4V7              	100.00%
A8JDL5              	8.19%		
Bootstrap support for A8J282 as seed ortholog is 96%.
Bootstrap support for B3L4V7 as seed ortholog is 99%.

Group of orthologs #420. Best score 219 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.knowlesi:141

A8JCX9              	100.00%		B3L6W2              	100.00%
Bootstrap support for A8JCX9 as seed ortholog is 100%.
Bootstrap support for B3L6W2 as seed ortholog is 100%.

Group of orthologs #421. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.knowlesi:111

A8HQ77              	100.00%		B3L5Z0              	100.00%
Bootstrap support for A8HQ77 as seed ortholog is 99%.
Bootstrap support for B3L5Z0 as seed ortholog is 100%.

Group of orthologs #422. Best score 218 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:61

A8JD64              	100.00%		B3L3Y1              	100.00%
Bootstrap support for A8JD64 as seed ortholog is 95%.
Bootstrap support for B3L3Y1 as seed ortholog is 99%.

Group of orthologs #423. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:12 P.knowlesi:217

A8ICW2              	100.00%		B3LA59              	100.00%
A8HPT5              	9.13%		B3L0M2              	45.84%
                    	       		B3KZU8              	31.13%
Bootstrap support for A8ICW2 as seed ortholog is 38%.
Alternative seed ortholog is A8IKR9 (12 bits away from this cluster)
Bootstrap support for B3LA59 as seed ortholog is 100%.

Group of orthologs #424. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:131

A8I427              	100.00%		B3L4W6              	100.00%
Bootstrap support for A8I427 as seed ortholog is 99%.
Bootstrap support for B3L4W6 as seed ortholog is 100%.

Group of orthologs #425. Best score 217 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:115

A8J0P9              	100.00%		B3L2G9              	100.00%
Bootstrap support for A8J0P9 as seed ortholog is 98%.
Bootstrap support for B3L2G9 as seed ortholog is 99%.

Group of orthologs #426. Best score 216 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:216

A8I1A4              	100.00%		B3L6X5              	100.00%
Bootstrap support for A8I1A4 as seed ortholog is 99%.
Bootstrap support for B3L6X5 as seed ortholog is 100%.

Group of orthologs #427. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:58

A8HN42              	100.00%		B3L5Q4              	100.00%
Bootstrap support for A8HN42 as seed ortholog is 100%.
Bootstrap support for B3L5Q4 as seed ortholog is 99%.

Group of orthologs #428. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.knowlesi:215

A8I7W6              	100.00%		B3L2J5              	100.00%
Bootstrap support for A8I7W6 as seed ortholog is 100%.
Bootstrap support for B3L2J5 as seed ortholog is 100%.

Group of orthologs #429. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.knowlesi:215

A8I2T0              	100.00%		B3L7M5              	100.00%
Bootstrap support for A8I2T0 as seed ortholog is 100%.
Bootstrap support for B3L7M5 as seed ortholog is 100%.

Group of orthologs #430. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:31 P.knowlesi:153

A8IVK0              	100.00%		B3L2B5              	100.00%
Bootstrap support for A8IVK0 as seed ortholog is 90%.
Bootstrap support for B3L2B5 as seed ortholog is 100%.

Group of orthologs #431. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.knowlesi:215

A8J8J1              	100.00%		B3LC03              	100.00%
Bootstrap support for A8J8J1 as seed ortholog is 100%.
Bootstrap support for B3LC03 as seed ortholog is 100%.

Group of orthologs #432. Best score 215 bits
Score difference with first non-orthologous sequence - C.reinhardtii:215 P.knowlesi:158

A8JAW4              	100.00%		B3LAB0              	100.00%
Bootstrap support for A8JAW4 as seed ortholog is 100%.
Bootstrap support for B3LAB0 as seed ortholog is 99%.

Group of orthologs #433. Best score 213 bits
Score difference with first non-orthologous sequence - C.reinhardtii:213 P.knowlesi:213

A8J3T9              	100.00%		B3L1B5              	100.00%
Bootstrap support for A8J3T9 as seed ortholog is 100%.
Bootstrap support for B3L1B5 as seed ortholog is 100%.

Group of orthologs #434. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:212

A8HNF4              	100.00%		B3L0G6              	100.00%
Bootstrap support for A8HNF4 as seed ortholog is 100%.
Bootstrap support for B3L0G6 as seed ortholog is 100%.

Group of orthologs #435. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:212

A8HNP3              	100.00%		B3L838              	100.00%
Bootstrap support for A8HNP3 as seed ortholog is 100%.
Bootstrap support for B3L838 as seed ortholog is 100%.

Group of orthologs #436. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:212

A8HVQ1              	100.00%		B3LAS9              	100.00%
Bootstrap support for A8HVQ1 as seed ortholog is 100%.
Bootstrap support for B3LAS9 as seed ortholog is 100%.

Group of orthologs #437. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:212

A8IRL9              	100.00%		B3LAR7              	100.00%
Bootstrap support for A8IRL9 as seed ortholog is 100%.
Bootstrap support for B3LAR7 as seed ortholog is 100%.

Group of orthologs #438. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:212 P.knowlesi:212

A8J9B2              	100.00%		B3L984              	100.00%
Bootstrap support for A8J9B2 as seed ortholog is 100%.
Bootstrap support for B3L984 as seed ortholog is 100%.

Group of orthologs #439. Best score 212 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:212

Q84X75              	100.00%		B3L2P6              	100.00%
Bootstrap support for Q84X75 as seed ortholog is 99%.
Bootstrap support for B3L2P6 as seed ortholog is 100%.

Group of orthologs #440. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:135

A8HQG8              	100.00%		B3LCA6              	100.00%
Bootstrap support for A8HQG8 as seed ortholog is 95%.
Bootstrap support for B3LCA6 as seed ortholog is 99%.

Group of orthologs #441. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.knowlesi:211

A8HQR0              	100.00%		B3LCL3              	100.00%
Bootstrap support for A8HQR0 as seed ortholog is 100%.
Bootstrap support for B3LCL3 as seed ortholog is 100%.

Group of orthologs #442. Best score 211 bits
Score difference with first non-orthologous sequence - C.reinhardtii:211 P.knowlesi:59

A8JHX0              	100.00%		B3L702              	100.00%
Bootstrap support for A8JHX0 as seed ortholog is 100%.
Bootstrap support for B3L702 as seed ortholog is 97%.

Group of orthologs #443. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.knowlesi:210

A8I263              	100.00%		B3L0V6              	100.00%
A8J129              	35.50%		
A8HXW8              	18.29%		
Bootstrap support for A8I263 as seed ortholog is 100%.
Bootstrap support for B3L0V6 as seed ortholog is 100%.

Group of orthologs #444. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:210 P.knowlesi:210

A8HYG6              	100.00%		B3L7K8              	100.00%
Bootstrap support for A8HYG6 as seed ortholog is 100%.
Bootstrap support for B3L7K8 as seed ortholog is 100%.

Group of orthologs #445. Best score 210 bits
Score difference with first non-orthologous sequence - C.reinhardtii:163 P.knowlesi:210

A8IRQ1              	100.00%		B3L6C0              	100.00%
Bootstrap support for A8IRQ1 as seed ortholog is 100%.
Bootstrap support for B3L6C0 as seed ortholog is 100%.

Group of orthologs #446. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 P.knowlesi:209

A8HN69              	100.00%		B3LBX9              	100.00%
Bootstrap support for A8HN69 as seed ortholog is 100%.
Bootstrap support for B3LBX9 as seed ortholog is 100%.

Group of orthologs #447. Best score 209 bits
Score difference with first non-orthologous sequence - C.reinhardtii:209 P.knowlesi:209

A8IGY1              	100.00%		B3L734              	100.00%
Bootstrap support for A8IGY1 as seed ortholog is 100%.
Bootstrap support for B3L734 as seed ortholog is 100%.

Group of orthologs #448. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.knowlesi:208

A8J149              	100.00%		B3L0B0              	100.00%
Bootstrap support for A8J149 as seed ortholog is 100%.
Bootstrap support for B3L0B0 as seed ortholog is 100%.

Group of orthologs #449. Best score 208 bits
Score difference with first non-orthologous sequence - C.reinhardtii:208 P.knowlesi:82

Q5S7Y5              	100.00%		B3LA18              	100.00%
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.
Bootstrap support for B3LA18 as seed ortholog is 99%.

Group of orthologs #450. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:35

A8J8R3              	100.00%		B3LBN5              	100.00%
A8J8R1              	46.82%		
Bootstrap support for A8J8R3 as seed ortholog is 93%.
Bootstrap support for B3LBN5 as seed ortholog is 83%.

Group of orthologs #451. Best score 207 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:207

A8I2N1              	100.00%		B3LCI8              	100.00%
Bootstrap support for A8I2N1 as seed ortholog is 99%.
Bootstrap support for B3LCI8 as seed ortholog is 100%.

Group of orthologs #452. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.knowlesi:206

A8JFG3              	100.00%		B3LB98              	100.00%
A7LGV1              	33.85%		
A8J4Z2              	6.90%		
A8IXK0              	5.42%		
Bootstrap support for A8JFG3 as seed ortholog is 100%.
Bootstrap support for B3LB98 as seed ortholog is 100%.

Group of orthologs #453. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.knowlesi:206

A8IX41              	100.00%		B3L593              	100.00%
Bootstrap support for A8IX41 as seed ortholog is 100%.
Bootstrap support for B3L593 as seed ortholog is 100%.

Group of orthologs #454. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.knowlesi:206

A8IT69              	100.00%		B3LB46              	100.00%
Bootstrap support for A8IT69 as seed ortholog is 100%.
Bootstrap support for B3LB46 as seed ortholog is 100%.

Group of orthologs #455. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.knowlesi:206

A8J6P3              	100.00%		B3L5Y9              	100.00%
Bootstrap support for A8J6P3 as seed ortholog is 100%.
Bootstrap support for B3L5Y9 as seed ortholog is 100%.

Group of orthologs #456. Best score 206 bits
Score difference with first non-orthologous sequence - C.reinhardtii:206 P.knowlesi:206

A8JDZ8              	100.00%		B3L1U4              	100.00%
Bootstrap support for A8JDZ8 as seed ortholog is 100%.
Bootstrap support for B3L1U4 as seed ortholog is 100%.

Group of orthologs #457. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.knowlesi:205

A8J073              	100.00%		B3L0E1              	100.00%
Bootstrap support for A8J073 as seed ortholog is 100%.
Bootstrap support for B3L0E1 as seed ortholog is 100%.

Group of orthologs #458. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.knowlesi:205

A8IL60              	100.00%		B3LAS6              	100.00%
Bootstrap support for A8IL60 as seed ortholog is 99%.
Bootstrap support for B3LAS6 as seed ortholog is 100%.

Group of orthologs #459. Best score 205 bits
Score difference with first non-orthologous sequence - C.reinhardtii:205 P.knowlesi:205

A8JAS9              	100.00%		B3LB97              	100.00%
Bootstrap support for A8JAS9 as seed ortholog is 100%.
Bootstrap support for B3LB97 as seed ortholog is 100%.

Group of orthologs #460. Best score 204 bits
Score difference with first non-orthologous sequence - C.reinhardtii:204 P.knowlesi:204

A8ID74              	100.00%		B3LAV2              	100.00%
Bootstrap support for A8ID74 as seed ortholog is 100%.
Bootstrap support for B3LAV2 as seed ortholog is 100%.

Group of orthologs #461. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.knowlesi:203

A8J805              	100.00%		B3L6X3              	100.00%
Bootstrap support for A8J805 as seed ortholog is 100%.
Bootstrap support for B3L6X3 as seed ortholog is 100%.

Group of orthologs #462. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.knowlesi:203

A8JHL7              	100.00%		B3L0P1              	100.00%
Bootstrap support for A8JHL7 as seed ortholog is 100%.
Bootstrap support for B3L0P1 as seed ortholog is 100%.

Group of orthologs #463. Best score 203 bits
Score difference with first non-orthologous sequence - C.reinhardtii:203 P.knowlesi:203

A8JD76              	100.00%		B3LCG3              	100.00%
Bootstrap support for A8JD76 as seed ortholog is 100%.
Bootstrap support for B3LCG3 as seed ortholog is 100%.

Group of orthologs #464. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.knowlesi:202

A8IRE2              	100.00%		B3KZ72              	100.00%
Bootstrap support for A8IRE2 as seed ortholog is 100%.
Bootstrap support for B3KZ72 as seed ortholog is 100%.

Group of orthologs #465. Best score 202 bits
Score difference with first non-orthologous sequence - C.reinhardtii:202 P.knowlesi:202

A8HSU7              	100.00%		B3LC68              	100.00%
Bootstrap support for A8HSU7 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #466. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.knowlesi:201

A8HXZ5              	100.00%		B3L673              	100.00%
Bootstrap support for A8HXZ5 as seed ortholog is 100%.
Bootstrap support for B3L673 as seed ortholog is 100%.

Group of orthologs #467. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.knowlesi:201

A8I4H4              	100.00%		B3L5N9              	100.00%
Bootstrap support for A8I4H4 as seed ortholog is 100%.
Bootstrap support for B3L5N9 as seed ortholog is 100%.

Group of orthologs #468. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.knowlesi:201

A8I901              	100.00%		B3L5F7              	100.00%
Bootstrap support for A8I901 as seed ortholog is 100%.
Bootstrap support for B3L5F7 as seed ortholog is 100%.

Group of orthologs #469. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.knowlesi:68

A8IB12              	100.00%		B3LAP9              	100.00%
Bootstrap support for A8IB12 as seed ortholog is 100%.
Bootstrap support for B3LAP9 as seed ortholog is 98%.

Group of orthologs #470. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.knowlesi:201

A8IEP3              	100.00%		B3L9F2              	100.00%
Bootstrap support for A8IEP3 as seed ortholog is 100%.
Bootstrap support for B3L9F2 as seed ortholog is 100%.

Group of orthologs #471. Best score 201 bits
Score difference with first non-orthologous sequence - C.reinhardtii:201 P.knowlesi:201

A8J7D8              	100.00%		B3KZD2              	100.00%
Bootstrap support for A8J7D8 as seed ortholog is 100%.
Bootstrap support for B3KZD2 as seed ortholog is 100%.

Group of orthologs #472. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.knowlesi:113

Q9FE86              	100.00%		B3LA28              	100.00%
A8I2V3              	15.85%		B3LCE5              	7.69%
A8JIT5              	6.79%		
Bootstrap support for Q9FE86 as seed ortholog is 100%.
Bootstrap support for B3LA28 as seed ortholog is 99%.

Group of orthologs #473. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.knowlesi:200

A8HVP2              	100.00%		B3L567              	100.00%
Bootstrap support for A8HVP2 as seed ortholog is 100%.
Bootstrap support for B3L567 as seed ortholog is 100%.

Group of orthologs #474. Best score 200 bits
Score difference with first non-orthologous sequence - C.reinhardtii:200 P.knowlesi:200

A8IGM5              	100.00%		B3L2T6              	100.00%
Bootstrap support for A8IGM5 as seed ortholog is 100%.
Bootstrap support for B3L2T6 as seed ortholog is 100%.

Group of orthologs #475. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.knowlesi:106

A8HN23              	100.00%		B3L761              	100.00%
Bootstrap support for A8HN23 as seed ortholog is 97%.
Bootstrap support for B3L761 as seed ortholog is 99%.

Group of orthologs #476. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.knowlesi:199

A8IDN7              	100.00%		B3LAT7              	100.00%
Bootstrap support for A8IDN7 as seed ortholog is 100%.
Bootstrap support for B3LAT7 as seed ortholog is 100%.

Group of orthologs #477. Best score 199 bits
Score difference with first non-orthologous sequence - C.reinhardtii:199 P.knowlesi:199

A8JDP4              	100.00%		B3L904              	100.00%
Bootstrap support for A8JDP4 as seed ortholog is 100%.
Bootstrap support for B3L904 as seed ortholog is 100%.

Group of orthologs #478. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.knowlesi:198

A8IW55              	100.00%		B3LCT1              	100.00%
A8I268              	27.70%		
A8IE86              	15.67%		
A8HRK2              	15.25%		
A8I4J0              	13.64%		
Bootstrap support for A8IW55 as seed ortholog is 100%.
Bootstrap support for B3LCT1 as seed ortholog is 100%.

Group of orthologs #479. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.knowlesi:198

A8IWL4              	100.00%		B3L059              	100.00%
Bootstrap support for A8IWL4 as seed ortholog is 100%.
Bootstrap support for B3L059 as seed ortholog is 100%.

Group of orthologs #480. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:198 P.knowlesi:198

A8I980              	100.00%		B3LA15              	100.00%
Bootstrap support for A8I980 as seed ortholog is 100%.
Bootstrap support for B3LA15 as seed ortholog is 100%.

Group of orthologs #481. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.knowlesi:198

A8J493              	100.00%		B3LBZ3              	100.00%
Bootstrap support for A8J493 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #482. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:138

A8J9W0              	100.00%		B3L8R4              	100.00%
Bootstrap support for A8J9W0 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 100%.

Group of orthologs #483. Best score 198 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:198

Q66YD3              	100.00%		B3L024              	100.00%
Bootstrap support for Q66YD3 as seed ortholog is 100%.
Bootstrap support for B3L024 as seed ortholog is 100%.

Group of orthologs #484. Best score 197 bits
Score difference with first non-orthologous sequence - C.reinhardtii:197 P.knowlesi:197

A8IYG7              	100.00%		B3L963              	100.00%
Bootstrap support for A8IYG7 as seed ortholog is 100%.
Bootstrap support for B3L963 as seed ortholog is 100%.

Group of orthologs #485. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:28 P.knowlesi:81

A8IZV8              	100.00%		B3L4Y4              	100.00%
Bootstrap support for A8IZV8 as seed ortholog is 92%.
Bootstrap support for B3L4Y4 as seed ortholog is 99%.

Group of orthologs #486. Best score 196 bits
Score difference with first non-orthologous sequence - C.reinhardtii:196 P.knowlesi:196

A8JHC3              	100.00%		B3L435              	100.00%
Bootstrap support for A8JHC3 as seed ortholog is 100%.
Bootstrap support for B3L435 as seed ortholog is 100%.

Group of orthologs #487. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.knowlesi:195

A8J9H8              	100.00%		B3L6V5              	100.00%
A8JH12              	18.58%		
Bootstrap support for A8J9H8 as seed ortholog is 100%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #488. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:195

A8IVU0              	100.00%		B3L3H1              	100.00%
Bootstrap support for A8IVU0 as seed ortholog is 100%.
Bootstrap support for B3L3H1 as seed ortholog is 100%.

Group of orthologs #489. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.knowlesi:195

A8IT87              	100.00%		B3LCJ0              	100.00%
Bootstrap support for A8IT87 as seed ortholog is 100%.
Bootstrap support for B3LCJ0 as seed ortholog is 100%.

Group of orthologs #490. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:195 P.knowlesi:195

A8JHW6              	100.00%		B3L325              	100.00%
Bootstrap support for A8JHW6 as seed ortholog is 100%.
Bootstrap support for B3L325 as seed ortholog is 100%.

Group of orthologs #491. Best score 195 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.knowlesi:101

A8JGI0              	100.00%		B3L5X6              	100.00%
Bootstrap support for A8JGI0 as seed ortholog is 99%.
Bootstrap support for B3L5X6 as seed ortholog is 99%.

Group of orthologs #492. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.knowlesi:112

A8HQ87              	100.00%		B3L2A7              	100.00%
Bootstrap support for A8HQ87 as seed ortholog is 99%.
Bootstrap support for B3L2A7 as seed ortholog is 100%.

Group of orthologs #493. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.knowlesi:194

A8I4N9              	100.00%		B3L367              	100.00%
Bootstrap support for A8I4N9 as seed ortholog is 100%.
Bootstrap support for B3L367 as seed ortholog is 100%.

Group of orthologs #494. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.knowlesi:194

A8IIN4              	100.00%		B3L1I5              	100.00%
Bootstrap support for A8IIN4 as seed ortholog is 100%.
Bootstrap support for B3L1I5 as seed ortholog is 100%.

Group of orthologs #495. Best score 194 bits
Score difference with first non-orthologous sequence - C.reinhardtii:194 P.knowlesi:194

A8IV05              	100.00%		B3LCU5              	100.00%
Bootstrap support for A8IV05 as seed ortholog is 100%.
Bootstrap support for B3LCU5 as seed ortholog is 100%.

Group of orthologs #496. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.knowlesi:62

A8J6A0              	100.00%		B3KZK6              	100.00%
Bootstrap support for A8J6A0 as seed ortholog is 99%.
Bootstrap support for B3KZK6 as seed ortholog is 99%.

Group of orthologs #497. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:142

A8J8G5              	100.00%		B3L6U8              	100.00%
Bootstrap support for A8J8G5 as seed ortholog is 100%.
Bootstrap support for B3L6U8 as seed ortholog is 99%.

Group of orthologs #498. Best score 193 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:132

A8JFY4              	100.00%		B3L9Z7              	100.00%
Bootstrap support for A8JFY4 as seed ortholog is 99%.
Bootstrap support for B3L9Z7 as seed ortholog is 100%.

Group of orthologs #499. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.knowlesi:192

A8HVA3              	100.00%		B3L4K2              	100.00%
A8HSB0              	92.86%		
A8JJH1              	35.71%		
A8J9L9              	21.43%		
A8JIN9              	14.29%		
Bootstrap support for A8HVA3 as seed ortholog is 98%.
Bootstrap support for B3L4K2 as seed ortholog is 100%.

Group of orthologs #500. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.knowlesi:192

A8IY87              	100.00%		B3L436              	100.00%
Bootstrap support for A8IY87 as seed ortholog is 100%.
Bootstrap support for B3L436 as seed ortholog is 100%.

Group of orthologs #501. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.knowlesi:192

A8J597              	100.00%		B3L698              	100.00%
Bootstrap support for A8J597 as seed ortholog is 100%.
Bootstrap support for B3L698 as seed ortholog is 100%.

Group of orthologs #502. Best score 192 bits
Score difference with first non-orthologous sequence - C.reinhardtii:192 P.knowlesi:192

A8JBH0              	100.00%		B3L4H4              	100.00%
Bootstrap support for A8JBH0 as seed ortholog is 100%.
Bootstrap support for B3L4H4 as seed ortholog is 100%.

Group of orthologs #503. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:191

A8HRZ9              	100.00%		B3L3Z2              	100.00%
Bootstrap support for A8HRZ9 as seed ortholog is 100%.
Bootstrap support for B3L3Z2 as seed ortholog is 100%.

Group of orthologs #504. Best score 191 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.knowlesi:191

A8IAK9              	100.00%		B3L8F0              	100.00%
Bootstrap support for A8IAK9 as seed ortholog is 99%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #505. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.knowlesi:190

A8ITQ5              	100.00%		B3L5V6              	100.00%
Bootstrap support for A8ITQ5 as seed ortholog is 100%.
Bootstrap support for B3L5V6 as seed ortholog is 100%.

Group of orthologs #506. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:52 P.knowlesi:121

A8J5V5              	100.00%		B3L274              	100.00%
Bootstrap support for A8J5V5 as seed ortholog is 91%.
Bootstrap support for B3L274 as seed ortholog is 99%.

Group of orthologs #507. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.knowlesi:190

A8J9V0              	100.00%		B3L895              	100.00%
Bootstrap support for A8J9V0 as seed ortholog is 100%.
Bootstrap support for B3L895 as seed ortholog is 100%.

Group of orthologs #508. Best score 190 bits
Score difference with first non-orthologous sequence - C.reinhardtii:190 P.knowlesi:190

A8JBE4              	100.00%		B3LCP7              	100.00%
Bootstrap support for A8JBE4 as seed ortholog is 100%.
Bootstrap support for B3LCP7 as seed ortholog is 100%.

Group of orthologs #509. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.knowlesi:27

A8J7A7              	100.00%		B3KZ74              	100.00%
A8J947              	22.37%		
Bootstrap support for A8J7A7 as seed ortholog is 92%.
Bootstrap support for B3KZ74 as seed ortholog is 82%.

Group of orthologs #510. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:189 P.knowlesi:189

A8IVE2              	100.00%		B3L4C5              	100.00%
Bootstrap support for A8IVE2 as seed ortholog is 100%.
Bootstrap support for B3L4C5 as seed ortholog is 100%.

Group of orthologs #511. Best score 189 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.knowlesi:189

A8JAQ9              	100.00%		B3L5G8              	100.00%
Bootstrap support for A8JAQ9 as seed ortholog is 99%.
Bootstrap support for B3L5G8 as seed ortholog is 100%.

Group of orthologs #512. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:188

A8HSB5              	100.00%		B3L7N0              	100.00%
A8HWF6              	100.00%		
A8HWM8              	100.00%		
A8IR81              	100.00%		
Q42680              	100.00%		
A8JJE0              	71.88%		
Bootstrap support for A8HSB5 as seed ortholog is 100%.
Bootstrap support for A8HWF6 as seed ortholog is 100%.
Bootstrap support for A8HWM8 as seed ortholog is 100%.
Bootstrap support for A8IR81 as seed ortholog is 100%.
Bootstrap support for Q42680 as seed ortholog is 100%.
Bootstrap support for B3L7N0 as seed ortholog is 100%.

Group of orthologs #513. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.knowlesi:188

A8I8J2              	100.00%		B3KZF5              	100.00%
Bootstrap support for A8I8J2 as seed ortholog is 97%.
Bootstrap support for B3KZF5 as seed ortholog is 100%.

Group of orthologs #514. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:86

A8IYA3              	100.00%		B3L2M7              	100.00%
Bootstrap support for A8IYA3 as seed ortholog is 99%.
Bootstrap support for B3L2M7 as seed ortholog is 99%.

Group of orthologs #515. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:188

A8J5J3              	100.00%		B3L056              	100.00%
Bootstrap support for A8J5J3 as seed ortholog is 99%.
Bootstrap support for B3L056 as seed ortholog is 100%.

Group of orthologs #516. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.knowlesi:188

A8JBD9              	100.00%		B3L2G0              	100.00%
Bootstrap support for A8JBD9 as seed ortholog is 100%.
Bootstrap support for B3L2G0 as seed ortholog is 100%.

Group of orthologs #517. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.knowlesi:188

A8J567              	100.00%		B3LAD9              	100.00%
Bootstrap support for A8J567 as seed ortholog is 100%.
Bootstrap support for B3LAD9 as seed ortholog is 100%.

Group of orthologs #518. Best score 188 bits
Score difference with first non-orthologous sequence - C.reinhardtii:188 P.knowlesi:188

A8JE07              	100.00%		B3L443              	100.00%
Bootstrap support for A8JE07 as seed ortholog is 100%.
Bootstrap support for B3L443 as seed ortholog is 100%.

Group of orthologs #519. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.knowlesi:187

A8HWI6              	100.00%		B3KZJ5              	100.00%
Bootstrap support for A8HWI6 as seed ortholog is 100%.
Bootstrap support for B3KZJ5 as seed ortholog is 100%.

Group of orthologs #520. Best score 187 bits
Score difference with first non-orthologous sequence - C.reinhardtii:187 P.knowlesi:187

A8ICL5              	100.00%		B3LC08              	100.00%
Bootstrap support for A8ICL5 as seed ortholog is 100%.
Bootstrap support for B3LC08 as seed ortholog is 100%.

Group of orthologs #521. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.knowlesi:186

A8HP17              	100.00%		B3L441              	100.00%
Bootstrap support for A8HP17 as seed ortholog is 100%.
Bootstrap support for B3L441 as seed ortholog is 100%.

Group of orthologs #522. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.knowlesi:186

A8I2D8              	100.00%		B3L1J9              	100.00%
Bootstrap support for A8I2D8 as seed ortholog is 100%.
Bootstrap support for B3L1J9 as seed ortholog is 100%.

Group of orthologs #523. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.knowlesi:186

A8I5H6              	100.00%		B3L0V2              	100.00%
Bootstrap support for A8I5H6 as seed ortholog is 100%.
Bootstrap support for B3L0V2 as seed ortholog is 100%.

Group of orthologs #524. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.knowlesi:186

A8HS59              	100.00%		B3L879              	100.00%
Bootstrap support for A8HS59 as seed ortholog is 100%.
Bootstrap support for B3L879 as seed ortholog is 100%.

Group of orthologs #525. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:186 P.knowlesi:186

A8I665              	100.00%		B3L580              	100.00%
Bootstrap support for A8I665 as seed ortholog is 100%.
Bootstrap support for B3L580 as seed ortholog is 100%.

Group of orthologs #526. Best score 186 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:186

A8JDV9              	100.00%		B3LBS5              	100.00%
Bootstrap support for A8JDV9 as seed ortholog is 99%.
Bootstrap support for B3LBS5 as seed ortholog is 100%.

Group of orthologs #527. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:185 P.knowlesi:185

A8IIJ6              	100.00%		B3L542              	100.00%
A8IIJ1              	6.63%		
Bootstrap support for A8IIJ6 as seed ortholog is 100%.
Bootstrap support for B3L542 as seed ortholog is 100%.

Group of orthologs #528. Best score 185 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.knowlesi:185

A8IGH1              	100.00%		B3LC58              	100.00%
                    	       		B3L7H4              	11.43%
Bootstrap support for A8IGH1 as seed ortholog is 75%.
Bootstrap support for B3LC58 as seed ortholog is 100%.

Group of orthologs #529. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.knowlesi:184

A8I6Y0              	100.00%		B3L7B1              	100.00%
Bootstrap support for A8I6Y0 as seed ortholog is 94%.
Bootstrap support for B3L7B1 as seed ortholog is 100%.

Group of orthologs #530. Best score 184 bits
Score difference with first non-orthologous sequence - C.reinhardtii:184 P.knowlesi:184

A8IUL5              	100.00%		B3L623              	100.00%
Bootstrap support for A8IUL5 as seed ortholog is 100%.
Bootstrap support for B3L623 as seed ortholog is 100%.

Group of orthologs #531. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.knowlesi:183

Q7XJ66              	100.00%		B3L6I6              	100.00%
Q84XW3              	30.88%		
A8HN02              	6.34%		
Bootstrap support for Q7XJ66 as seed ortholog is 100%.
Bootstrap support for B3L6I6 as seed ortholog is 100%.

Group of orthologs #532. Best score 183 bits
Score difference with first non-orthologous sequence - C.reinhardtii:183 P.knowlesi:183

A8IS24              	100.00%		B3L4G2              	100.00%
Bootstrap support for A8IS24 as seed ortholog is 100%.
Bootstrap support for B3L4G2 as seed ortholog is 100%.

Group of orthologs #533. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.knowlesi:180

A8I762              	100.00%		B3LBK8              	100.00%
Bootstrap support for A8I762 as seed ortholog is 99%.
Bootstrap support for B3LBK8 as seed ortholog is 100%.

Group of orthologs #534. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:180 P.knowlesi:180

A8IZ78              	100.00%		B3L5A7              	100.00%
Bootstrap support for A8IZ78 as seed ortholog is 100%.
Bootstrap support for B3L5A7 as seed ortholog is 100%.

Group of orthologs #535. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.knowlesi:72

A8J856              	100.00%		B3L7Z4              	100.00%
Bootstrap support for A8J856 as seed ortholog is 100%.
Bootstrap support for B3L7Z4 as seed ortholog is 99%.

Group of orthologs #536. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.knowlesi:180

A8J4L8              	100.00%		B3LD01              	100.00%
Bootstrap support for A8J4L8 as seed ortholog is 52%.
Alternative seed ortholog is A8IRY5 (4 bits away from this cluster)
Bootstrap support for B3LD01 as seed ortholog is 100%.

Group of orthologs #537. Best score 180 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:139

A8JGY3              	100.00%		B3L3M8              	100.00%
Bootstrap support for A8JGY3 as seed ortholog is 98%.
Bootstrap support for B3L3M8 as seed ortholog is 100%.

Group of orthologs #538. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:179 P.knowlesi:179

A8HMQ1              	100.00%		B3L8H8              	100.00%
Bootstrap support for A8HMQ1 as seed ortholog is 100%.
Bootstrap support for B3L8H8 as seed ortholog is 100%.

Group of orthologs #539. Best score 179 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.knowlesi:54

A8J5F6              	100.00%		B3LD60              	100.00%
Bootstrap support for A8J5F6 as seed ortholog is 83%.
Bootstrap support for B3LD60 as seed ortholog is 85%.

Group of orthologs #540. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.knowlesi:95

A8HQ72              	100.00%		B3L1Y3              	100.00%
Bootstrap support for A8HQ72 as seed ortholog is 100%.
Bootstrap support for B3L1Y3 as seed ortholog is 99%.

Group of orthologs #541. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.knowlesi:178

A8HQJ4              	100.00%		B3L7U7              	100.00%
Bootstrap support for A8HQJ4 as seed ortholog is 100%.
Bootstrap support for B3L7U7 as seed ortholog is 100%.

Group of orthologs #542. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.knowlesi:178

A8IM52              	100.00%		B3L0T9              	100.00%
Bootstrap support for A8IM52 as seed ortholog is 91%.
Bootstrap support for B3L0T9 as seed ortholog is 100%.

Group of orthologs #543. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.knowlesi:178

A8HVV2              	100.00%		B3LA41              	100.00%
Bootstrap support for A8HVV2 as seed ortholog is 100%.
Bootstrap support for B3LA41 as seed ortholog is 100%.

Group of orthologs #544. Best score 178 bits
Score difference with first non-orthologous sequence - C.reinhardtii:178 P.knowlesi:178

A8IJZ3              	100.00%		B3LAC8              	100.00%
Bootstrap support for A8IJZ3 as seed ortholog is 100%.
Bootstrap support for B3LAC8 as seed ortholog is 100%.

Group of orthologs #545. Best score 177 bits
Score difference with first non-orthologous sequence - C.reinhardtii:177 P.knowlesi:177

A8I297              	100.00%		B3LB29              	100.00%
Bootstrap support for A8I297 as seed ortholog is 100%.
Bootstrap support for B3LB29 as seed ortholog is 100%.

Group of orthologs #546. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.knowlesi:176

Q4U0V8              	100.00%		B3L5M8              	100.00%
Q9S7V1              	9.89%		
Bootstrap support for Q4U0V8 as seed ortholog is 100%.
Bootstrap support for B3L5M8 as seed ortholog is 100%.

Group of orthologs #547. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:176 P.knowlesi:176

A8IZA4              	100.00%		B3L9G8              	100.00%
Bootstrap support for A8IZA4 as seed ortholog is 100%.
Bootstrap support for B3L9G8 as seed ortholog is 100%.

Group of orthologs #548. Best score 176 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:74

A8J760              	100.00%		B3LC84              	100.00%
Bootstrap support for A8J760 as seed ortholog is 100%.
Bootstrap support for B3LC84 as seed ortholog is 99%.

Group of orthologs #549. Best score 175 bits
Score difference with first non-orthologous sequence - C.reinhardtii:175 P.knowlesi:175

A8JHZ6              	100.00%		B3LAL0              	100.00%
Bootstrap support for A8JHZ6 as seed ortholog is 100%.
Bootstrap support for B3LAL0 as seed ortholog is 100%.

Group of orthologs #550. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.knowlesi:174

A8JBB8              	100.00%		B3LA78              	100.00%
Bootstrap support for A8JBB8 as seed ortholog is 100%.
Bootstrap support for B3LA78 as seed ortholog is 100%.

Group of orthologs #551. Best score 174 bits
Score difference with first non-orthologous sequence - C.reinhardtii:174 P.knowlesi:174

A8JBN4              	100.00%		B3LD49              	100.00%
Bootstrap support for A8JBN4 as seed ortholog is 100%.
Bootstrap support for B3LD49 as seed ortholog is 100%.

Group of orthologs #552. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.knowlesi:41

A8IA03              	100.00%		B3L603              	100.00%
Q6UPR4              	20.31%		
Q6UPR1              	5.24%		
Bootstrap support for A8IA03 as seed ortholog is 96%.
Bootstrap support for B3L603 as seed ortholog is 90%.

Group of orthologs #553. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.knowlesi:173

A8JJ26              	100.00%		B3LA23              	100.00%
Q8HEB4              	8.04%		
Bootstrap support for A8JJ26 as seed ortholog is 100%.
Bootstrap support for B3LA23 as seed ortholog is 100%.

Group of orthologs #554. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.knowlesi:173

A8HN50              	100.00%		B3L8I6              	100.00%
Bootstrap support for A8HN50 as seed ortholog is 100%.
Bootstrap support for B3L8I6 as seed ortholog is 100%.

Group of orthologs #555. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.knowlesi:173

A8IQV5              	100.00%		B3L7T1              	100.00%
Bootstrap support for A8IQV5 as seed ortholog is 100%.
Bootstrap support for B3L7T1 as seed ortholog is 100%.

Group of orthologs #556. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.knowlesi:173

A8J588              	100.00%		B3L782              	100.00%
Bootstrap support for A8J588 as seed ortholog is 100%.
Bootstrap support for B3L782 as seed ortholog is 100%.

Group of orthologs #557. Best score 173 bits
Score difference with first non-orthologous sequence - C.reinhardtii:173 P.knowlesi:173

A8J7U7              	100.00%		B3L947              	100.00%
Bootstrap support for A8J7U7 as seed ortholog is 100%.
Bootstrap support for B3L947 as seed ortholog is 100%.

Group of orthologs #558. Best score 172 bits
Score difference with first non-orthologous sequence - C.reinhardtii:172 P.knowlesi:172

A8I0A0              	100.00%		B3L1A5              	100.00%
Bootstrap support for A8I0A0 as seed ortholog is 100%.
Bootstrap support for B3L1A5 as seed ortholog is 100%.

Group of orthologs #559. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.knowlesi:171

A8IF01              	100.00%		B3L5W9              	100.00%
Bootstrap support for A8IF01 as seed ortholog is 100%.
Bootstrap support for B3L5W9 as seed ortholog is 100%.

Group of orthologs #560. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.knowlesi:171

A8IGT6              	100.00%		B3L9J5              	100.00%
Bootstrap support for A8IGT6 as seed ortholog is 82%.
Bootstrap support for B3L9J5 as seed ortholog is 100%.

Group of orthologs #561. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.knowlesi:171

A8J304              	100.00%		B3L1K9              	100.00%
Bootstrap support for A8J304 as seed ortholog is 100%.
Bootstrap support for B3L1K9 as seed ortholog is 100%.

Group of orthologs #562. Best score 171 bits
Score difference with first non-orthologous sequence - C.reinhardtii:171 P.knowlesi:171

A8J7M2              	100.00%		B3L745              	100.00%
Bootstrap support for A8J7M2 as seed ortholog is 100%.
Bootstrap support for B3L745 as seed ortholog is 100%.

Group of orthologs #563. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.knowlesi:170

A8JGD1              	100.00%		B3LAJ5              	100.00%
Q7XXT3              	33.38%		B3LA84              	51.97%
Bootstrap support for A8JGD1 as seed ortholog is 100%.
Bootstrap support for B3LAJ5 as seed ortholog is 100%.

Group of orthologs #564. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.knowlesi:170

A8I032              	100.00%		B3LBE7              	100.00%
Bootstrap support for A8I032 as seed ortholog is 100%.
Bootstrap support for B3LBE7 as seed ortholog is 100%.

Group of orthologs #565. Best score 170 bits
Score difference with first non-orthologous sequence - C.reinhardtii:170 P.knowlesi:170

A8J1Q1              	100.00%		B3L8I0              	100.00%
Bootstrap support for A8J1Q1 as seed ortholog is 100%.
Bootstrap support for B3L8I0 as seed ortholog is 100%.

Group of orthologs #566. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:70

A8IH35              	100.00%		B3L1P9              	100.00%
Bootstrap support for A8IH35 as seed ortholog is 97%.
Bootstrap support for B3L1P9 as seed ortholog is 99%.

Group of orthologs #567. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.knowlesi:169

A8JGY8              	100.00%		B3L181              	100.00%
Bootstrap support for A8JGY8 as seed ortholog is 100%.
Bootstrap support for B3L181 as seed ortholog is 100%.

Group of orthologs #568. Best score 169 bits
Score difference with first non-orthologous sequence - C.reinhardtii:169 P.knowlesi:169

Q84JV7              	100.00%		B3LBY1              	100.00%
Bootstrap support for Q84JV7 as seed ortholog is 100%.
Bootstrap support for B3LBY1 as seed ortholog is 100%.

Group of orthologs #569. Best score 168 bits
Score difference with first non-orthologous sequence - C.reinhardtii:168 P.knowlesi:168

A8IRP8              	100.00%		B3L312              	100.00%
Bootstrap support for A8IRP8 as seed ortholog is 100%.
Bootstrap support for B3L312 as seed ortholog is 100%.

Group of orthologs #570. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.knowlesi:167

A8JAS5              	100.00%		B3L4W8              	100.00%
A8IM62              	16.75%		B3L104              	8.99%
Bootstrap support for A8JAS5 as seed ortholog is 92%.
Bootstrap support for B3L4W8 as seed ortholog is 100%.

Group of orthologs #571. Best score 167 bits
Score difference with first non-orthologous sequence - C.reinhardtii:40 P.knowlesi:82

A8J2Y5              	100.00%		B3L398              	100.00%
Bootstrap support for A8J2Y5 as seed ortholog is 85%.
Bootstrap support for B3L398 as seed ortholog is 96%.

Group of orthologs #572. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.knowlesi:166

A8HZC5              	100.00%		B3LAS3              	100.00%
Bootstrap support for A8HZC5 as seed ortholog is 100%.
Bootstrap support for B3LAS3 as seed ortholog is 100%.

Group of orthologs #573. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.knowlesi:166

A8HYM2              	100.00%		B3LB55              	100.00%
Bootstrap support for A8HYM2 as seed ortholog is 100%.
Bootstrap support for B3LB55 as seed ortholog is 100%.

Group of orthologs #574. Best score 166 bits
Score difference with first non-orthologous sequence - C.reinhardtii:166 P.knowlesi:166

Q944M9              	100.00%		B3L9M4              	100.00%
Bootstrap support for Q944M9 as seed ortholog is 100%.
Bootstrap support for B3L9M4 as seed ortholog is 100%.

Group of orthologs #575. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.knowlesi:165

A8I9H8              	100.00%		B3KZK0              	100.00%
Bootstrap support for A8I9H8 as seed ortholog is 74%.
Alternative seed ortholog is A8JGN8 (7 bits away from this cluster)
Bootstrap support for B3KZK0 as seed ortholog is 100%.

Group of orthologs #576. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.knowlesi:165

A8HYD8              	100.00%		B3L4X4              	100.00%
Bootstrap support for A8HYD8 as seed ortholog is 100%.
Bootstrap support for B3L4X4 as seed ortholog is 100%.

Group of orthologs #577. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.knowlesi:165

A8J032              	100.00%		B3L1Y5              	100.00%
Bootstrap support for A8J032 as seed ortholog is 100%.
Bootstrap support for B3L1Y5 as seed ortholog is 100%.

Group of orthologs #578. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.knowlesi:165

A8J3U8              	100.00%		B3L4R3              	100.00%
Bootstrap support for A8J3U8 as seed ortholog is 100%.
Bootstrap support for B3L4R3 as seed ortholog is 100%.

Group of orthologs #579. Best score 165 bits
Score difference with first non-orthologous sequence - C.reinhardtii:165 P.knowlesi:165

Q84TR5              	100.00%		B3L4C4              	100.00%
Bootstrap support for Q84TR5 as seed ortholog is 100%.
Bootstrap support for B3L4C4 as seed ortholog is 100%.

Group of orthologs #580. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.knowlesi:164

A8IKV5              	100.00%		B3L0X4              	100.00%
A8HRQ4              	9.84%		
Bootstrap support for A8IKV5 as seed ortholog is 100%.
Bootstrap support for B3L0X4 as seed ortholog is 100%.

Group of orthologs #581. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.knowlesi:164

A8IDI5              	100.00%		B3LBW4              	100.00%
Bootstrap support for A8IDI5 as seed ortholog is 100%.
Bootstrap support for B3LBW4 as seed ortholog is 100%.

Group of orthologs #582. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.knowlesi:164

A8J724              	100.00%		B3L5H2              	100.00%
Bootstrap support for A8J724 as seed ortholog is 100%.
Bootstrap support for B3L5H2 as seed ortholog is 100%.

Group of orthologs #583. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.knowlesi:164

A8JG68              	100.00%		B3L3M9              	100.00%
Bootstrap support for A8JG68 as seed ortholog is 100%.
Bootstrap support for B3L3M9 as seed ortholog is 100%.

Group of orthologs #584. Best score 164 bits
Score difference with first non-orthologous sequence - C.reinhardtii:164 P.knowlesi:164

A8JCS0              	100.00%		B3LA48              	100.00%
Bootstrap support for A8JCS0 as seed ortholog is 100%.
Bootstrap support for B3LA48 as seed ortholog is 100%.

Group of orthologs #585. Best score 162 bits
Score difference with first non-orthologous sequence - C.reinhardtii:162 P.knowlesi:162

A8ITE5              	100.00%		B3LA20              	100.00%
Bootstrap support for A8ITE5 as seed ortholog is 100%.
Bootstrap support for B3LA20 as seed ortholog is 100%.

Group of orthologs #586. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.knowlesi:161

A8IW47              	100.00%		B3L319              	100.00%
Bootstrap support for A8IW47 as seed ortholog is 100%.
Bootstrap support for B3L319 as seed ortholog is 100%.

Group of orthologs #587. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.knowlesi:161

A8JI00              	100.00%		B3L1J5              	100.00%
Bootstrap support for A8JI00 as seed ortholog is 100%.
Bootstrap support for B3L1J5 as seed ortholog is 100%.

Group of orthologs #588. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:32 P.knowlesi:161

A8JEQ4              	100.00%		B3LAU5              	100.00%
Bootstrap support for A8JEQ4 as seed ortholog is 71%.
Alternative seed ortholog is A8J390 (32 bits away from this cluster)
Bootstrap support for B3LAU5 as seed ortholog is 100%.

Group of orthologs #589. Best score 161 bits
Score difference with first non-orthologous sequence - C.reinhardtii:161 P.knowlesi:161

A8JGK1              	100.00%		B3LD68              	100.00%
Bootstrap support for A8JGK1 as seed ortholog is 100%.
Bootstrap support for B3LD68 as seed ortholog is 100%.

Group of orthologs #590. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 P.knowlesi:19

A8HSB7              	100.00%		B3LBW6              	100.00%
A8J9W4              	11.64%		
A8HYQ4              	5.41%		
Bootstrap support for A8HSB7 as seed ortholog is 74%.
Alternative seed ortholog is Q6V8K6 (21 bits away from this cluster)
Bootstrap support for B3LBW6 as seed ortholog is 70%.
Alternative seed ortholog is B3LD00 (19 bits away from this cluster)

Group of orthologs #591. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.knowlesi:160

A8HVN9              	100.00%		B3L1D1              	100.00%
Bootstrap support for A8HVN9 as seed ortholog is 100%.
Bootstrap support for B3L1D1 as seed ortholog is 100%.

Group of orthologs #592. Best score 160 bits
Score difference with first non-orthologous sequence - C.reinhardtii:160 P.knowlesi:160

A8JEP8              	100.00%		B3LAF4              	100.00%
Bootstrap support for A8JEP8 as seed ortholog is 100%.
Bootstrap support for B3LAF4 as seed ortholog is 100%.

Group of orthologs #593. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.knowlesi:159

A8I0M0              	100.00%		B3L2Y1              	100.00%
Bootstrap support for A8I0M0 as seed ortholog is 100%.
Bootstrap support for B3L2Y1 as seed ortholog is 100%.

Group of orthologs #594. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.knowlesi:159

A8HPG2              	100.00%		B3LD90              	100.00%
Bootstrap support for A8HPG2 as seed ortholog is 100%.
Bootstrap support for B3LD90 as seed ortholog is 100%.

Group of orthologs #595. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.knowlesi:159

A8IQD4              	100.00%		B3L7H0              	100.00%
Bootstrap support for A8IQD4 as seed ortholog is 99%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #596. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.knowlesi:159

A8JBA8              	100.00%		B3L2Q4              	100.00%
Bootstrap support for A8JBA8 as seed ortholog is 100%.
Bootstrap support for B3L2Q4 as seed ortholog is 100%.

Group of orthologs #597. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:159 P.knowlesi:159

A8JFC3              	100.00%		B3KZ34              	100.00%
Bootstrap support for A8JFC3 as seed ortholog is 100%.
Bootstrap support for B3KZ34 as seed ortholog is 100%.

Group of orthologs #598. Best score 159 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:115

A8JH45              	100.00%		B3LCD2              	100.00%
Bootstrap support for A8JH45 as seed ortholog is 100%.
Bootstrap support for B3LCD2 as seed ortholog is 100%.

Group of orthologs #599. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.knowlesi:9

A8HSB2              	100.00%		B3L4K3              	100.00%
A8HWX5              	100.00%		
A8IR69              	100.00%		
A8IW75              	100.00%		
A8IW84              	99.31%		
A8HV98              	99.28%		
A8HWX1              	98.56%		
A8HWE3              	97.84%		
A8JIN6              	97.84%		
A8JDE1              	97.84%		
A8JDH1              	96.40%		
A8IJS4              	96.40%		
A8JDC9              	96.40%		
A8IR79              	95.68%		
A8JDC0              	94.96%		
A8IJR6              	91.37%		
A8JJQ6              	89.93%		
A8JJS0              	83.45%		
A8JJV5              	32.14%		
A8JJN6              	27.34%		
A8JCT1              	15.28%		
Bootstrap support for A8HSB2 as seed ortholog is 99%.
Bootstrap support for A8HWX5 as seed ortholog is 99%.
Bootstrap support for A8IR69 as seed ortholog is 99%.
Bootstrap support for A8IW75 as seed ortholog is 99%.
Bootstrap support for B3L4K3 as seed ortholog is 68%.
Alternative seed ortholog is B3LC36 (9 bits away from this cluster)

Group of orthologs #600. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.knowlesi:158

A8I5B9              	100.00%		B3LBX3              	100.00%
Bootstrap support for A8I5B9 as seed ortholog is 100%.
Bootstrap support for B3LBX3 as seed ortholog is 100%.

Group of orthologs #601. Best score 158 bits
Score difference with first non-orthologous sequence - C.reinhardtii:158 P.knowlesi:158

A8JFB1              	100.00%		B3LB83              	100.00%
Bootstrap support for A8JFB1 as seed ortholog is 100%.
Bootstrap support for B3LB83 as seed ortholog is 100%.

Group of orthologs #602. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.knowlesi:157

A8J7T7              	100.00%		B3L4V5              	100.00%
A8I5R9              	100.00%		B3L4V3              	100.00%
                    	       		B3L4V4              	51.52%
                    	       		B3L9I5              	6.05%
Bootstrap support for A8J7T7 as seed ortholog is 100%.
Bootstrap support for A8I5R9 as seed ortholog is 100%.
Bootstrap support for B3L4V5 as seed ortholog is 100%.
Bootstrap support for B3L4V3 as seed ortholog is 100%.

Group of orthologs #603. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:157

A8I108              	100.00%		B3L4U3              	100.00%
A8JCA4              	27.36%		
Bootstrap support for A8I108 as seed ortholog is 99%.
Bootstrap support for B3L4U3 as seed ortholog is 100%.

Group of orthologs #604. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.knowlesi:102

A8I9F6              	100.00%		B3L166              	100.00%
Bootstrap support for A8I9F6 as seed ortholog is 99%.
Bootstrap support for B3L166 as seed ortholog is 100%.

Group of orthologs #605. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.knowlesi:157

A8IZH0              	100.00%		B3L4B7              	100.00%
Bootstrap support for A8IZH0 as seed ortholog is 100%.
Bootstrap support for B3L4B7 as seed ortholog is 100%.

Group of orthologs #606. Best score 157 bits
Score difference with first non-orthologous sequence - C.reinhardtii:157 P.knowlesi:157

A8JH29              	100.00%		B3L6K9              	100.00%
Bootstrap support for A8JH29 as seed ortholog is 100%.
Bootstrap support for B3L6K9 as seed ortholog is 100%.

Group of orthologs #607. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.knowlesi:156

A8HYU2              	100.00%		B3KZL3              	100.00%
Bootstrap support for A8HYU2 as seed ortholog is 100%.
Bootstrap support for B3KZL3 as seed ortholog is 100%.

Group of orthologs #608. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.knowlesi:33

A8HPM0              	100.00%		B3L4I9              	100.00%
Bootstrap support for A8HPM0 as seed ortholog is 100%.
Bootstrap support for B3L4I9 as seed ortholog is 89%.

Group of orthologs #609. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.knowlesi:156

A8HY98              	100.00%		B3L9X9              	100.00%
Bootstrap support for A8HY98 as seed ortholog is 100%.
Bootstrap support for B3L9X9 as seed ortholog is 100%.

Group of orthologs #610. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.knowlesi:156

A8IHI1              	100.00%		B3L5F0              	100.00%
Bootstrap support for A8IHI1 as seed ortholog is 100%.
Bootstrap support for B3L5F0 as seed ortholog is 100%.

Group of orthologs #611. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.knowlesi:156

A8J6L8              	100.00%		B3L1E6              	100.00%
Bootstrap support for A8J6L8 as seed ortholog is 100%.
Bootstrap support for B3L1E6 as seed ortholog is 100%.

Group of orthologs #612. Best score 156 bits
Score difference with first non-orthologous sequence - C.reinhardtii:156 P.knowlesi:156

A8JGK5              	100.00%		B3L5Y1              	100.00%
Bootstrap support for A8JGK5 as seed ortholog is 100%.
Bootstrap support for B3L5Y1 as seed ortholog is 100%.

Group of orthologs #613. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.knowlesi:155

A8ILT1              	100.00%		B3L1D6              	100.00%
Bootstrap support for A8ILT1 as seed ortholog is 100%.
Bootstrap support for B3L1D6 as seed ortholog is 100%.

Group of orthologs #614. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.knowlesi:155

A8IV36              	100.00%		B3L1T3              	100.00%
Bootstrap support for A8IV36 as seed ortholog is 100%.
Bootstrap support for B3L1T3 as seed ortholog is 100%.

Group of orthologs #615. Best score 155 bits
Score difference with first non-orthologous sequence - C.reinhardtii:155 P.knowlesi:155

A8J675              	100.00%		B3L4N9              	100.00%
Bootstrap support for A8J675 as seed ortholog is 100%.
Bootstrap support for B3L4N9 as seed ortholog is 100%.

Group of orthologs #616. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.knowlesi:100

A8IIQ2              	100.00%		B3L3A0              	100.00%
A8IXI7              	5.11%		
Bootstrap support for A8IIQ2 as seed ortholog is 99%.
Bootstrap support for B3L3A0 as seed ortholog is 99%.

Group of orthologs #617. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.knowlesi:154

A8IR74              	100.00%		B3KZ70              	100.00%
Bootstrap support for A8IR74 as seed ortholog is 100%.
Bootstrap support for B3KZ70 as seed ortholog is 100%.

Group of orthologs #618. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.knowlesi:154

A8IVW9              	100.00%		B3L3P6              	100.00%
Bootstrap support for A8IVW9 as seed ortholog is 100%.
Bootstrap support for B3L3P6 as seed ortholog is 100%.

Group of orthologs #619. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.knowlesi:58

A8J3X9              	100.00%		B3L3G4              	100.00%
Bootstrap support for A8J3X9 as seed ortholog is 100%.
Bootstrap support for B3L3G4 as seed ortholog is 99%.

Group of orthologs #620. Best score 154 bits
Score difference with first non-orthologous sequence - C.reinhardtii:154 P.knowlesi:154

A8J0R2              	100.00%		B3LBZ7              	100.00%
Bootstrap support for A8J0R2 as seed ortholog is 100%.
Bootstrap support for B3LBZ7 as seed ortholog is 100%.

Group of orthologs #621. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.knowlesi:4

A8J3C4              	100.00%		B3LAA5              	100.00%
A8J2F9              	13.01%		
Bootstrap support for A8J3C4 as seed ortholog is 100%.
Bootstrap support for B3LAA5 as seed ortholog is 56%.
Alternative seed ortholog is B3L2Z9 (4 bits away from this cluster)

Group of orthologs #622. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.knowlesi:153

A8ISN1              	100.00%		B3KZM9              	100.00%
Bootstrap support for A8ISN1 as seed ortholog is 100%.
Bootstrap support for B3KZM9 as seed ortholog is 100%.

Group of orthologs #623. Best score 153 bits
Score difference with first non-orthologous sequence - C.reinhardtii:153 P.knowlesi:153

A8IJX8              	100.00%		B3L6K8              	100.00%
Bootstrap support for A8IJX8 as seed ortholog is 100%.
Bootstrap support for B3L6K8 as seed ortholog is 100%.

Group of orthologs #624. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.knowlesi:152

A8IQE0              	100.00%		B3L103              	100.00%
Bootstrap support for A8IQE0 as seed ortholog is 100%.
Bootstrap support for B3L103 as seed ortholog is 100%.

Group of orthologs #625. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.knowlesi:152

A8IUQ3              	100.00%		B3L6K3              	100.00%
Bootstrap support for A8IUQ3 as seed ortholog is 93%.
Bootstrap support for B3L6K3 as seed ortholog is 100%.

Group of orthologs #626. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.knowlesi:152

A8J8M9              	100.00%		B3L3G6              	100.00%
Bootstrap support for A8J8M9 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #627. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:75

A8J8W6              	100.00%		B3L695              	100.00%
Bootstrap support for A8J8W6 as seed ortholog is 94%.
Bootstrap support for B3L695 as seed ortholog is 66%.
Alternative seed ortholog is B3L501 (75 bits away from this cluster)

Group of orthologs #628. Best score 152 bits
Score difference with first non-orthologous sequence - C.reinhardtii:152 P.knowlesi:152

A8JAI8              	100.00%		B3L948              	100.00%
Bootstrap support for A8JAI8 as seed ortholog is 100%.
Bootstrap support for B3L948 as seed ortholog is 100%.

Group of orthologs #629. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:35 P.knowlesi:34

A8ISU1              	100.00%		B3L807              	100.00%
A8JIJ9              	10.00%		
Bootstrap support for A8ISU1 as seed ortholog is 86%.
Bootstrap support for B3L807 as seed ortholog is 85%.

Group of orthologs #630. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:151

A8J0X4              	100.00%		B3L9Q8              	100.00%
A8J6J6              	9.50%		
Bootstrap support for A8J0X4 as seed ortholog is 100%.
Bootstrap support for B3L9Q8 as seed ortholog is 100%.

Group of orthologs #631. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:151

A8I9G5              	100.00%		B3L5J4              	100.00%
Bootstrap support for A8I9G5 as seed ortholog is 100%.
Bootstrap support for B3L5J4 as seed ortholog is 100%.

Group of orthologs #632. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:151

A8I872              	100.00%		B3LB86              	100.00%
Bootstrap support for A8I872 as seed ortholog is 100%.
Bootstrap support for B3LB86 as seed ortholog is 100%.

Group of orthologs #633. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:151

A8IVX2              	100.00%		B3L2X6              	100.00%
Bootstrap support for A8IVX2 as seed ortholog is 100%.
Bootstrap support for B3L2X6 as seed ortholog is 100%.

Group of orthologs #634. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:151

A8IBS4              	100.00%		B3LDB1              	100.00%
Bootstrap support for A8IBS4 as seed ortholog is 100%.
Bootstrap support for B3LDB1 as seed ortholog is 100%.

Group of orthologs #635. Best score 151 bits
Score difference with first non-orthologous sequence - C.reinhardtii:151 P.knowlesi:105

A8JDZ2              	100.00%		B3L291              	100.00%
Bootstrap support for A8JDZ2 as seed ortholog is 100%.
Bootstrap support for B3L291 as seed ortholog is 99%.

Group of orthologs #636. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.knowlesi:150

A8J2G4              	100.00%		B3L349              	100.00%
Bootstrap support for A8J2G4 as seed ortholog is 100%.
Bootstrap support for B3L349 as seed ortholog is 100%.

Group of orthologs #637. Best score 150 bits
Score difference with first non-orthologous sequence - C.reinhardtii:150 P.knowlesi:150

A8J8S6              	100.00%		B3L8G0              	100.00%
Bootstrap support for A8J8S6 as seed ortholog is 100%.
Bootstrap support for B3L8G0 as seed ortholog is 100%.

Group of orthologs #638. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.knowlesi:149

A8IZE1              	100.00%		B3LBB3              	100.00%
                    	       		B3L4E9              	77.28%
Bootstrap support for A8IZE1 as seed ortholog is 100%.
Bootstrap support for B3LBB3 as seed ortholog is 100%.

Group of orthologs #639. Best score 149 bits
Score difference with first non-orthologous sequence - C.reinhardtii:149 P.knowlesi:149

A8I9K8              	100.00%		B3LCD7              	100.00%
Bootstrap support for A8I9K8 as seed ortholog is 100%.
Bootstrap support for B3LCD7 as seed ortholog is 100%.

Group of orthologs #640. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.knowlesi:148

A8ITI8              	100.00%		B3L2C8              	100.00%
Bootstrap support for A8ITI8 as seed ortholog is 100%.
Bootstrap support for B3L2C8 as seed ortholog is 100%.

Group of orthologs #641. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.knowlesi:148

A8IYQ8              	100.00%		B3L341              	100.00%
Bootstrap support for A8IYQ8 as seed ortholog is 100%.
Bootstrap support for B3L341 as seed ortholog is 100%.

Group of orthologs #642. Best score 148 bits
Score difference with first non-orthologous sequence - C.reinhardtii:148 P.knowlesi:148

A8IWV3              	100.00%		B3L9T3              	100.00%
Bootstrap support for A8IWV3 as seed ortholog is 100%.
Bootstrap support for B3L9T3 as seed ortholog is 100%.

Group of orthologs #643. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.knowlesi:147

A8INB8              	100.00%		B3L386              	100.00%
Bootstrap support for A8INB8 as seed ortholog is 100%.
Bootstrap support for B3L386 as seed ortholog is 100%.

Group of orthologs #644. Best score 147 bits
Score difference with first non-orthologous sequence - C.reinhardtii:147 P.knowlesi:147

A8J212              	100.00%		B3KZA9              	100.00%
Bootstrap support for A8J212 as seed ortholog is 100%.
Bootstrap support for B3KZA9 as seed ortholog is 100%.

Group of orthologs #645. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:146

A8J513              	100.00%		B3LB24              	100.00%
A2BCY1              	9.59%		
Bootstrap support for A8J513 as seed ortholog is 100%.
Bootstrap support for B3LB24 as seed ortholog is 100%.

Group of orthologs #646. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:146

A8HMG7              	100.00%		B3L470              	100.00%
Bootstrap support for A8HMG7 as seed ortholog is 100%.
Bootstrap support for B3L470 as seed ortholog is 100%.

Group of orthologs #647. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:146

A8HP64              	100.00%		B3L693              	100.00%
Bootstrap support for A8HP64 as seed ortholog is 100%.
Bootstrap support for B3L693 as seed ortholog is 100%.

Group of orthologs #648. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:67

A8IYF7              	100.00%		B3L051              	100.00%
Bootstrap support for A8IYF7 as seed ortholog is 100%.
Bootstrap support for B3L051 as seed ortholog is 88%.

Group of orthologs #649. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:146

A8ILK1              	100.00%		B3L8A6              	100.00%
Bootstrap support for A8ILK1 as seed ortholog is 100%.
Bootstrap support for B3L8A6 as seed ortholog is 100%.

Group of orthologs #650. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:146

A8ITF6              	100.00%		B3LAK3              	100.00%
Bootstrap support for A8ITF6 as seed ortholog is 100%.
Bootstrap support for B3LAK3 as seed ortholog is 100%.

Group of orthologs #651. Best score 146 bits
Score difference with first non-orthologous sequence - C.reinhardtii:146 P.knowlesi:146

A8JCT4              	100.00%		B3L4P4              	100.00%
Bootstrap support for A8JCT4 as seed ortholog is 100%.
Bootstrap support for B3L4P4 as seed ortholog is 100%.

Group of orthologs #652. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:145

A8I9S9              	100.00%		B3L7Y4              	100.00%
A8IA42              	27.38%		
A8JC21              	22.15%		
Bootstrap support for A8I9S9 as seed ortholog is 100%.
Bootstrap support for B3L7Y4 as seed ortholog is 100%.

Group of orthologs #653. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:145

A8HM37              	100.00%		B3LDC6              	100.00%
A8HYH9              	14.02%		
Bootstrap support for A8HM37 as seed ortholog is 100%.
Bootstrap support for B3LDC6 as seed ortholog is 100%.

Group of orthologs #654. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:38

A8HRV5              	100.00%		B3L324              	100.00%
Bootstrap support for A8HRV5 as seed ortholog is 100%.
Bootstrap support for B3L324 as seed ortholog is 78%.

Group of orthologs #655. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:145

A8I1Y7              	100.00%		B3L6H9              	100.00%
Bootstrap support for A8I1Y7 as seed ortholog is 100%.
Bootstrap support for B3L6H9 as seed ortholog is 100%.

Group of orthologs #656. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:89

A8J275              	100.00%		B3LAB5              	100.00%
Bootstrap support for A8J275 as seed ortholog is 99%.
Bootstrap support for B3LAB5 as seed ortholog is 99%.

Group of orthologs #657. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:145

A8JAY5              	100.00%		B3L4X8              	100.00%
Bootstrap support for A8JAY5 as seed ortholog is 100%.
Bootstrap support for B3L4X8 as seed ortholog is 100%.

Group of orthologs #658. Best score 145 bits
Score difference with first non-orthologous sequence - C.reinhardtii:145 P.knowlesi:145

A8J7S5              	100.00%		B3L8R9              	100.00%
Bootstrap support for A8J7S5 as seed ortholog is 100%.
Bootstrap support for B3L8R9 as seed ortholog is 100%.

Group of orthologs #659. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.knowlesi:144

Q8LKG7              	100.00%		B3L625              	100.00%
A8I780              	62.77%		
Bootstrap support for Q8LKG7 as seed ortholog is 100%.
Bootstrap support for B3L625 as seed ortholog is 100%.

Group of orthologs #660. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.knowlesi:144

A8ICT1              	100.00%		B3L1V2              	100.00%
Bootstrap support for A8ICT1 as seed ortholog is 100%.
Bootstrap support for B3L1V2 as seed ortholog is 100%.

Group of orthologs #661. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.knowlesi:144

A8J6S1              	100.00%		B3L8X2              	100.00%
Bootstrap support for A8J6S1 as seed ortholog is 100%.
Bootstrap support for B3L8X2 as seed ortholog is 100%.

Group of orthologs #662. Best score 144 bits
Score difference with first non-orthologous sequence - C.reinhardtii:144 P.knowlesi:42

A8JGY2              	100.00%		B3KZZ3              	100.00%
Bootstrap support for A8JGY2 as seed ortholog is 100%.
Bootstrap support for B3KZZ3 as seed ortholog is 86%.

Group of orthologs #663. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.knowlesi:143

A8HP81              	100.00%		B3KYZ6              	100.00%
Bootstrap support for A8HP81 as seed ortholog is 100%.
Bootstrap support for B3KYZ6 as seed ortholog is 100%.

Group of orthologs #664. Best score 143 bits
Score difference with first non-orthologous sequence - C.reinhardtii:143 P.knowlesi:143

A8IJ00              	100.00%		B3LAU3              	100.00%
Bootstrap support for A8IJ00 as seed ortholog is 100%.
Bootstrap support for B3LAU3 as seed ortholog is 100%.

Group of orthologs #665. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:142

A8HVK4              	100.00%		B3LAY3              	100.00%
Bootstrap support for A8HVK4 as seed ortholog is 100%.
Bootstrap support for B3LAY3 as seed ortholog is 100%.

Group of orthologs #666. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.knowlesi:142

A8I029              	100.00%		B3LB59              	100.00%
Bootstrap support for A8I029 as seed ortholog is 100%.
Bootstrap support for B3LB59 as seed ortholog is 100%.

Group of orthologs #667. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.knowlesi:142

A8J0Y7              	100.00%		B3L8J0              	100.00%
Bootstrap support for A8J0Y7 as seed ortholog is 100%.
Bootstrap support for B3L8J0 as seed ortholog is 100%.

Group of orthologs #668. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.knowlesi:142

A8J9A9              	100.00%		B3L2K1              	100.00%
Bootstrap support for A8J9A9 as seed ortholog is 100%.
Bootstrap support for B3L2K1 as seed ortholog is 100%.

Group of orthologs #669. Best score 142 bits
Score difference with first non-orthologous sequence - C.reinhardtii:142 P.knowlesi:142

A8IZG4              	100.00%		B3LB81              	100.00%
Bootstrap support for A8IZG4 as seed ortholog is 100%.
Bootstrap support for B3LB81 as seed ortholog is 100%.

Group of orthologs #670. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.knowlesi:141

A8IX17              	100.00%		B3L905              	100.00%
Bootstrap support for A8IX17 as seed ortholog is 100%.
Bootstrap support for B3L905 as seed ortholog is 100%.

Group of orthologs #671. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.knowlesi:141

A8JHR1              	100.00%		B3LCE1              	100.00%
Bootstrap support for A8JHR1 as seed ortholog is 100%.
Bootstrap support for B3LCE1 as seed ortholog is 100%.

Group of orthologs #672. Best score 141 bits
Score difference with first non-orthologous sequence - C.reinhardtii:141 P.knowlesi:141

Q9AU02              	100.00%		B3LA82              	100.00%
Bootstrap support for Q9AU02 as seed ortholog is 100%.
Bootstrap support for B3LA82 as seed ortholog is 100%.

Group of orthologs #673. Best score 140 bits
Score difference with first non-orthologous sequence - C.reinhardtii:140 P.knowlesi:140

A8J875              	100.00%		B3L269              	100.00%
Bootstrap support for A8J875 as seed ortholog is 100%.
Bootstrap support for B3L269 as seed ortholog is 100%.

Group of orthologs #674. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.knowlesi:139

A8HMA7              	100.00%		B3L3J7              	100.00%
Bootstrap support for A8HMA7 as seed ortholog is 100%.
Bootstrap support for B3L3J7 as seed ortholog is 100%.

Group of orthologs #675. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.knowlesi:139

A8IJ79              	100.00%		B3L6U9              	100.00%
Bootstrap support for A8IJ79 as seed ortholog is 99%.
Bootstrap support for B3L6U9 as seed ortholog is 100%.

Group of orthologs #676. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.knowlesi:72

A8J5T0              	100.00%		B3LAW9              	100.00%
Bootstrap support for A8J5T0 as seed ortholog is 100%.
Bootstrap support for B3LAW9 as seed ortholog is 99%.

Group of orthologs #677. Best score 139 bits
Score difference with first non-orthologous sequence - C.reinhardtii:139 P.knowlesi:139

A8JG85              	100.00%		B3L684              	100.00%
Bootstrap support for A8JG85 as seed ortholog is 100%.
Bootstrap support for B3L684 as seed ortholog is 100%.

Group of orthologs #678. Best score 138 bits
Score difference with first non-orthologous sequence - C.reinhardtii:138 P.knowlesi:138

A8J6M2              	100.00%		B3LD34              	100.00%
Bootstrap support for A8J6M2 as seed ortholog is 100%.
Bootstrap support for B3LD34 as seed ortholog is 100%.

Group of orthologs #679. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.knowlesi:137

A8J0A1              	100.00%		B3L2W0              	100.00%
A8IZB6              	14.19%		
Bootstrap support for A8J0A1 as seed ortholog is 96%.
Bootstrap support for B3L2W0 as seed ortholog is 100%.

Group of orthologs #680. Best score 137 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:94

A8J7F5              	100.00%		B3LCN8              	100.00%
Bootstrap support for A8J7F5 as seed ortholog is 100%.
Bootstrap support for B3LCN8 as seed ortholog is 99%.

Group of orthologs #681. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.knowlesi:136

A8IM74              	100.00%		B3L4F6              	100.00%
Bootstrap support for A8IM74 as seed ortholog is 100%.
Bootstrap support for B3L4F6 as seed ortholog is 100%.

Group of orthologs #682. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:136 P.knowlesi:12

A8IT96              	100.00%		B3LAT3              	100.00%
Bootstrap support for A8IT96 as seed ortholog is 100%.
Bootstrap support for B3LAT3 as seed ortholog is 61%.
Alternative seed ortholog is B3L9A3 (12 bits away from this cluster)

Group of orthologs #683. Best score 136 bits
Score difference with first non-orthologous sequence - C.reinhardtii:1 P.knowlesi:10

A8JB79              	100.00%		B3LCN5              	100.00%
Bootstrap support for A8JB79 as seed ortholog is 51%.
Alternative seed ortholog is A8J5J2 (1 bits away from this cluster)
Bootstrap support for B3LCN5 as seed ortholog is 64%.
Alternative seed ortholog is B3LB23 (10 bits away from this cluster)

Group of orthologs #684. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.knowlesi:135

A8II85              	100.00%		B3L635              	100.00%
Bootstrap support for A8II85 as seed ortholog is 100%.
Bootstrap support for B3L635 as seed ortholog is 100%.

Group of orthologs #685. Best score 135 bits
Score difference with first non-orthologous sequence - C.reinhardtii:135 P.knowlesi:135

A8J3U2              	100.00%		B3L6S2              	100.00%
Bootstrap support for A8J3U2 as seed ortholog is 100%.
Bootstrap support for B3L6S2 as seed ortholog is 100%.

Group of orthologs #686. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.knowlesi:134

A8HXL0              	100.00%		B3L4T4              	100.00%
A8J3P3              	24.32%		
Bootstrap support for A8HXL0 as seed ortholog is 96%.
Bootstrap support for B3L4T4 as seed ortholog is 100%.

Group of orthologs #687. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.knowlesi:134

A8J4E1              	100.00%		B3L9L6              	100.00%
A8HPK0              	6.09%		
Bootstrap support for A8J4E1 as seed ortholog is 84%.
Bootstrap support for B3L9L6 as seed ortholog is 100%.

Group of orthologs #688. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.knowlesi:134

A8IGJ8              	100.00%		B3LBI7              	100.00%
Bootstrap support for A8IGJ8 as seed ortholog is 100%.
Bootstrap support for B3LBI7 as seed ortholog is 100%.

Group of orthologs #689. Best score 134 bits
Score difference with first non-orthologous sequence - C.reinhardtii:134 P.knowlesi:134

A8JGI9              	100.00%		B3LBI9              	100.00%
Bootstrap support for A8JGI9 as seed ortholog is 100%.
Bootstrap support for B3LBI9 as seed ortholog is 100%.

Group of orthologs #690. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.knowlesi:133

A8HQ73              	100.00%		B3L900              	100.00%
A8HNI9              	17.45%		
Bootstrap support for A8HQ73 as seed ortholog is 100%.
Bootstrap support for B3L900 as seed ortholog is 100%.

Group of orthologs #691. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.knowlesi:133

A8J5L0              	100.00%		B3L610              	100.00%
A8J5K8              	8.76%		
Bootstrap support for A8J5L0 as seed ortholog is 100%.
Bootstrap support for B3L610 as seed ortholog is 100%.

Group of orthologs #692. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.knowlesi:133

A8IIC7              	100.00%		B3L136              	100.00%
Bootstrap support for A8IIC7 as seed ortholog is 100%.
Bootstrap support for B3L136 as seed ortholog is 100%.

Group of orthologs #693. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:133

A8JES1              	100.00%		B3L551              	100.00%
Bootstrap support for A8JES1 as seed ortholog is 99%.
Bootstrap support for B3L551 as seed ortholog is 100%.

Group of orthologs #694. Best score 133 bits
Score difference with first non-orthologous sequence - C.reinhardtii:133 P.knowlesi:133

A8JGU7              	100.00%		B3L7G9              	100.00%
Bootstrap support for A8JGU7 as seed ortholog is 100%.
Bootstrap support for B3L7G9 as seed ortholog is 100%.

Group of orthologs #695. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.knowlesi:132

A8IRW9              	100.00%		B3LDF8              	100.00%
A8IRW7              	18.56%		
Bootstrap support for A8IRW9 as seed ortholog is 100%.
Bootstrap support for B3LDF8 as seed ortholog is 100%.

Group of orthologs #696. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.knowlesi:91

A8J924              	100.00%		B3LBJ3              	100.00%
A8IT75              	7.38%		
Bootstrap support for A8J924 as seed ortholog is 92%.
Bootstrap support for B3LBJ3 as seed ortholog is 99%.

Group of orthologs #697. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:132 P.knowlesi:132

A8J426              	100.00%		B3L8Z7              	100.00%
Bootstrap support for A8J426 as seed ortholog is 100%.
Bootstrap support for B3L8Z7 as seed ortholog is 100%.

Group of orthologs #698. Best score 132 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:132

Q8VZX3              	100.00%		B3L4D9              	100.00%
Bootstrap support for Q8VZX3 as seed ortholog is 99%.
Bootstrap support for B3L4D9 as seed ortholog is 100%.

Group of orthologs #699. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.knowlesi:131

A8HYN9              	100.00%		B3L4M2              	100.00%
Bootstrap support for A8HYN9 as seed ortholog is 100%.
Bootstrap support for B3L4M2 as seed ortholog is 100%.

Group of orthologs #700. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:3 P.knowlesi:131

A8HP61              	100.00%		B3LBT5              	100.00%
Bootstrap support for A8HP61 as seed ortholog is 52%.
Alternative seed ortholog is A8I8X0 (3 bits away from this cluster)
Bootstrap support for B3LBT5 as seed ortholog is 100%.

Group of orthologs #701. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:131 P.knowlesi:131

A8ISK2              	100.00%		B3L236              	100.00%
Bootstrap support for A8ISK2 as seed ortholog is 100%.
Bootstrap support for B3L236 as seed ortholog is 100%.

Group of orthologs #702. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:41

A8J6T1              	100.00%		B3L8Y8              	100.00%
Bootstrap support for A8J6T1 as seed ortholog is 99%.
Bootstrap support for B3L8Y8 as seed ortholog is 92%.

Group of orthologs #703. Best score 131 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.knowlesi:83

A8J2A5              	100.00%		B3LD56              	100.00%
Bootstrap support for A8J2A5 as seed ortholog is 78%.
Bootstrap support for B3LD56 as seed ortholog is 98%.

Group of orthologs #704. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.knowlesi:130

A8HP50              	100.00%		B3L9P0              	100.00%
Bootstrap support for A8HP50 as seed ortholog is 100%.
Bootstrap support for B3L9P0 as seed ortholog is 100%.

Group of orthologs #705. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.knowlesi:130

A8I9R7              	100.00%		B3L8M1              	100.00%
Bootstrap support for A8I9R7 as seed ortholog is 100%.
Bootstrap support for B3L8M1 as seed ortholog is 100%.

Group of orthologs #706. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:130

A8J474              	100.00%		B3L2U1              	100.00%
Bootstrap support for A8J474 as seed ortholog is 99%.
Bootstrap support for B3L2U1 as seed ortholog is 100%.

Group of orthologs #707. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.knowlesi:130

A8J593              	100.00%		B3L994              	100.00%
Bootstrap support for A8J593 as seed ortholog is 100%.
Bootstrap support for B3L994 as seed ortholog is 100%.

Group of orthologs #708. Best score 130 bits
Score difference with first non-orthologous sequence - C.reinhardtii:130 P.knowlesi:130

A8JIP7              	100.00%		B3L0G5              	100.00%
Bootstrap support for A8JIP7 as seed ortholog is 100%.
Bootstrap support for B3L0G5 as seed ortholog is 100%.

Group of orthologs #709. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:129

A8I8S8              	100.00%		B3L198              	100.00%
A8J0C2              	78.54%		
A8HV32              	23.96%		
A8IZF5              	6.16%		
Bootstrap support for A8I8S8 as seed ortholog is 100%.
Bootstrap support for B3L198 as seed ortholog is 100%.

Group of orthologs #710. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:17

A8HYZ5              	100.00%		B3L4H5              	100.00%
A8J0Y2              	6.93%		
Bootstrap support for A8HYZ5 as seed ortholog is 100%.
Bootstrap support for B3L4H5 as seed ortholog is 62%.
Alternative seed ortholog is B3L8M0 (17 bits away from this cluster)

Group of orthologs #711. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:129

A8HQB8              	100.00%		B3LAU1              	100.00%
A8HMR0              	5.89%		
Bootstrap support for A8HQB8 as seed ortholog is 100%.
Bootstrap support for B3LAU1 as seed ortholog is 100%.

Group of orthologs #712. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:129

A8I0I1              	100.00%		B3L671              	100.00%
Bootstrap support for A8I0I1 as seed ortholog is 100%.
Bootstrap support for B3L671 as seed ortholog is 100%.

Group of orthologs #713. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:129

A8HZ94              	100.00%		B3L910              	100.00%
Bootstrap support for A8HZ94 as seed ortholog is 100%.
Bootstrap support for B3L910 as seed ortholog is 100%.

Group of orthologs #714. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:129

A8IN53              	100.00%		B3L3N3              	100.00%
Bootstrap support for A8IN53 as seed ortholog is 100%.
Bootstrap support for B3L3N3 as seed ortholog is 100%.

Group of orthologs #715. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:82

A8J5Q5              	100.00%		B3L288              	100.00%
Bootstrap support for A8J5Q5 as seed ortholog is 100%.
Bootstrap support for B3L288 as seed ortholog is 99%.

Group of orthologs #716. Best score 129 bits
Score difference with first non-orthologous sequence - C.reinhardtii:129 P.knowlesi:129

A8JGN6              	100.00%		B3L032              	100.00%
Bootstrap support for A8JGN6 as seed ortholog is 100%.
Bootstrap support for B3L032 as seed ortholog is 100%.

Group of orthologs #717. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:128

A8HR70              	100.00%		B3L5K2              	100.00%
Bootstrap support for A8HR70 as seed ortholog is 100%.
Bootstrap support for B3L5K2 as seed ortholog is 100%.

Group of orthologs #718. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:128

A8I2Y4              	100.00%		B3L314              	100.00%
Bootstrap support for A8I2Y4 as seed ortholog is 100%.
Bootstrap support for B3L314 as seed ortholog is 100%.

Group of orthologs #719. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:32

A8I8E3              	100.00%		B3L238              	100.00%
Bootstrap support for A8I8E3 as seed ortholog is 100%.
Bootstrap support for B3L238 as seed ortholog is 83%.

Group of orthologs #720. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:128

A8ITQ1              	100.00%		B3L9N2              	100.00%
Bootstrap support for A8ITQ1 as seed ortholog is 100%.
Bootstrap support for B3L9N2 as seed ortholog is 100%.

Group of orthologs #721. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:128

A8IZD4              	100.00%		B3LCN4              	100.00%
Bootstrap support for A8IZD4 as seed ortholog is 100%.
Bootstrap support for B3LCN4 as seed ortholog is 100%.

Group of orthologs #722. Best score 128 bits
Score difference with first non-orthologous sequence - C.reinhardtii:128 P.knowlesi:37

A8JEC1              	100.00%		B3L4T5              	100.00%
Bootstrap support for A8JEC1 as seed ortholog is 100%.
Bootstrap support for B3L4T5 as seed ortholog is 69%.
Alternative seed ortholog is B3L5C8 (37 bits away from this cluster)

Group of orthologs #723. Best score 127 bits
Score difference with first non-orthologous sequence - C.reinhardtii:127 P.knowlesi:127

A8HY76              	100.00%		B3LD46              	100.00%
Bootstrap support for A8HY76 as seed ortholog is 100%.
Bootstrap support for B3LD46 as seed ortholog is 100%.

Group of orthologs #724. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:126

A8HTT9              	100.00%		B3LBF4              	100.00%
A8JFG1              	25.66%		
Bootstrap support for A8HTT9 as seed ortholog is 99%.
Bootstrap support for B3LBF4 as seed ortholog is 100%.

Group of orthologs #725. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8I403              	100.00%		B3L1P2              	100.00%
Bootstrap support for A8I403 as seed ortholog is 100%.
Bootstrap support for B3L1P2 as seed ortholog is 100%.

Group of orthologs #726. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8IE95              	100.00%		B3L0K0              	100.00%
Bootstrap support for A8IE95 as seed ortholog is 100%.
Bootstrap support for B3L0K0 as seed ortholog is 100%.

Group of orthologs #727. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:10

A8ICX5              	100.00%		B3L2P7              	100.00%
Bootstrap support for A8ICX5 as seed ortholog is 100%.
Bootstrap support for B3L2P7 as seed ortholog is 59%.
Alternative seed ortholog is B3L5N8 (10 bits away from this cluster)

Group of orthologs #728. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8IJL3              	100.00%		B3L0R0              	100.00%
Bootstrap support for A8IJL3 as seed ortholog is 100%.
Bootstrap support for B3L0R0 as seed ortholog is 100%.

Group of orthologs #729. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8I8Y8              	100.00%		B3L721              	100.00%
Bootstrap support for A8I8Y8 as seed ortholog is 100%.
Bootstrap support for B3L721 as seed ortholog is 100%.

Group of orthologs #730. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8IRK7              	100.00%		B3L366              	100.00%
Bootstrap support for A8IRK7 as seed ortholog is 100%.
Bootstrap support for B3L366 as seed ortholog is 100%.

Group of orthologs #731. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:21 P.knowlesi:126

A8INX1              	100.00%		B3L4C3              	100.00%
Bootstrap support for A8INX1 as seed ortholog is 81%.
Bootstrap support for B3L4C3 as seed ortholog is 100%.

Group of orthologs #732. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8J2J9              	100.00%		B3L7Y2              	100.00%
Bootstrap support for A8J2J9 as seed ortholog is 100%.
Bootstrap support for B3L7Y2 as seed ortholog is 100%.

Group of orthologs #733. Best score 126 bits
Score difference with first non-orthologous sequence - C.reinhardtii:126 P.knowlesi:126

A8JCZ5              	100.00%		B3L176              	100.00%
Bootstrap support for A8JCZ5 as seed ortholog is 100%.
Bootstrap support for B3L176 as seed ortholog is 100%.

Group of orthologs #734. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.knowlesi:125

A8IYJ4              	100.00%		B3L9R4              	100.00%
A8IS63              	9.78%		
Bootstrap support for A8IYJ4 as seed ortholog is 100%.
Bootstrap support for B3L9R4 as seed ortholog is 100%.

Group of orthologs #735. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.knowlesi:125

A8ISQ2              	100.00%		B3L2N5              	100.00%
Bootstrap support for A8ISQ2 as seed ortholog is 100%.
Bootstrap support for B3L2N5 as seed ortholog is 100%.

Group of orthologs #736. Best score 125 bits
Score difference with first non-orthologous sequence - C.reinhardtii:125 P.knowlesi:125

A8J409              	100.00%		B3L3Q7              	100.00%
Bootstrap support for A8J409 as seed ortholog is 100%.
Bootstrap support for B3L3Q7 as seed ortholog is 100%.

Group of orthologs #737. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.knowlesi:124

Q75NZ3              	100.00%		B3L445              	100.00%
A8IYW1              	29.21%		
A8J4Q0              	28.28%		
Q6IYG4              	7.58%		
Bootstrap support for Q75NZ3 as seed ortholog is 100%.
Bootstrap support for B3L445 as seed ortholog is 100%.

Group of orthologs #738. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.knowlesi:124

A8IBG1              	100.00%		B3KZ11              	100.00%
Bootstrap support for A8IBG1 as seed ortholog is 100%.
Bootstrap support for B3KZ11 as seed ortholog is 100%.

Group of orthologs #739. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.knowlesi:124

A8IE44              	100.00%		B3L6X6              	100.00%
Bootstrap support for A8IE44 as seed ortholog is 100%.
Bootstrap support for B3L6X6 as seed ortholog is 100%.

Group of orthologs #740. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.knowlesi:124

A8IX73              	100.00%		B3L0V4              	100.00%
Bootstrap support for A8IX73 as seed ortholog is 85%.
Bootstrap support for B3L0V4 as seed ortholog is 100%.

Group of orthologs #741. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.knowlesi:72

A8J2J5              	100.00%		B3L550              	100.00%
Bootstrap support for A8J2J5 as seed ortholog is 100%.
Bootstrap support for B3L550 as seed ortholog is 96%.

Group of orthologs #742. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.knowlesi:124

A8J7Y2              	100.00%		B3L6W7              	100.00%
Bootstrap support for A8J7Y2 as seed ortholog is 100%.
Bootstrap support for B3L6W7 as seed ortholog is 100%.

Group of orthologs #743. Best score 124 bits
Score difference with first non-orthologous sequence - C.reinhardtii:124 P.knowlesi:124

A8JII8              	100.00%		B3L358              	100.00%
Bootstrap support for A8JII8 as seed ortholog is 100%.
Bootstrap support for B3L358 as seed ortholog is 100%.

Group of orthologs #744. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:123

A8HMG1              	100.00%		B3L389              	100.00%
A8HMF6              	51.49%		
Bootstrap support for A8HMG1 as seed ortholog is 100%.
Bootstrap support for B3L389 as seed ortholog is 100%.

Group of orthologs #745. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:123

A8HY08              	100.00%		B3L0Q3              	100.00%
Bootstrap support for A8HY08 as seed ortholog is 100%.
Bootstrap support for B3L0Q3 as seed ortholog is 100%.

Group of orthologs #746. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:123

A8I074              	100.00%		B3L0G8              	100.00%
Bootstrap support for A8I074 as seed ortholog is 100%.
Bootstrap support for B3L0G8 as seed ortholog is 100%.

Group of orthologs #747. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:123

A8IQQ5              	100.00%		B3LCJ4              	100.00%
Bootstrap support for A8IQQ5 as seed ortholog is 100%.
Bootstrap support for B3LCJ4 as seed ortholog is 100%.

Group of orthologs #748. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:123

A8J507              	100.00%		B3L5H7              	100.00%
Bootstrap support for A8J507 as seed ortholog is 100%.
Bootstrap support for B3L5H7 as seed ortholog is 100%.

Group of orthologs #749. Best score 123 bits
Score difference with first non-orthologous sequence - C.reinhardtii:123 P.knowlesi:123

A8JB85              	100.00%		B3L1V7              	100.00%
Bootstrap support for A8JB85 as seed ortholog is 100%.
Bootstrap support for B3L1V7 as seed ortholog is 100%.

Group of orthologs #750. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.knowlesi:122

A8I0Y2              	100.00%		B3L5N0              	100.00%
Bootstrap support for A8I0Y2 as seed ortholog is 100%.
Bootstrap support for B3L5N0 as seed ortholog is 100%.

Group of orthologs #751. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.knowlesi:122

A8IR87              	100.00%		B3L474              	100.00%
Bootstrap support for A8IR87 as seed ortholog is 100%.
Bootstrap support for B3L474 as seed ortholog is 100%.

Group of orthologs #752. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.knowlesi:122

A8IP53              	100.00%		B3LD77              	100.00%
Bootstrap support for A8IP53 as seed ortholog is 100%.
Bootstrap support for B3LD77 as seed ortholog is 100%.

Group of orthologs #753. Best score 122 bits
Score difference with first non-orthologous sequence - C.reinhardtii:122 P.knowlesi:122

A8J239              	100.00%		B3L901              	100.00%
Bootstrap support for A8J239 as seed ortholog is 100%.
Bootstrap support for B3L901 as seed ortholog is 100%.

Group of orthologs #754. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.knowlesi:121

A8HYT0              	100.00%		B3L5P4              	100.00%
A8JDY4              	11.35%		
Bootstrap support for A8HYT0 as seed ortholog is 100%.
Bootstrap support for B3L5P4 as seed ortholog is 100%.

Group of orthologs #755. Best score 121 bits
Score difference with first non-orthologous sequence - C.reinhardtii:121 P.knowlesi:121

A8IIA2              	100.00%		B3L662              	100.00%
Bootstrap support for A8IIA2 as seed ortholog is 100%.
Bootstrap support for B3L662 as seed ortholog is 100%.

Group of orthologs #756. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.knowlesi:47

A8JBW4              	100.00%		B3L664              	100.00%
A8J0N4              	19.96%		
Bootstrap support for A8JBW4 as seed ortholog is 100%.
Bootstrap support for B3L664 as seed ortholog is 84%.

Group of orthologs #757. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.knowlesi:120

A8IC04              	100.00%		B3L937              	100.00%
Bootstrap support for A8IC04 as seed ortholog is 100%.
Bootstrap support for B3L937 as seed ortholog is 100%.

Group of orthologs #758. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:120 P.knowlesi:120

A8IWT0              	100.00%		B3L0W9              	100.00%
Bootstrap support for A8IWT0 as seed ortholog is 100%.
Bootstrap support for B3L0W9 as seed ortholog is 100%.

Group of orthologs #759. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:24 P.knowlesi:120

A8IZC1              	100.00%		B3L1H4              	100.00%
Bootstrap support for A8IZC1 as seed ortholog is 79%.
Bootstrap support for B3L1H4 as seed ortholog is 100%.

Group of orthologs #760. Best score 120 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.knowlesi:49

A8JGB3              	100.00%		B3L5I2              	100.00%
Bootstrap support for A8JGB3 as seed ortholog is 80%.
Bootstrap support for B3L5I2 as seed ortholog is 86%.

Group of orthologs #761. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:119

A8HX47              	100.00%		B3L125              	100.00%
Bootstrap support for A8HX47 as seed ortholog is 59%.
Alternative seed ortholog is A8JCC5 (43 bits away from this cluster)
Bootstrap support for B3L125 as seed ortholog is 100%.

Group of orthologs #762. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:119

A8HZ87              	100.00%		B3L5K5              	100.00%
Bootstrap support for A8HZ87 as seed ortholog is 100%.
Bootstrap support for B3L5K5 as seed ortholog is 100%.

Group of orthologs #763. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:119

A8ICF7              	100.00%		B3L1E5              	100.00%
Bootstrap support for A8ICF7 as seed ortholog is 100%.
Bootstrap support for B3L1E5 as seed ortholog is 100%.

Group of orthologs #764. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:119

A8IS22              	100.00%		B3L0H5              	100.00%
Bootstrap support for A8IS22 as seed ortholog is 100%.
Bootstrap support for B3L0H5 as seed ortholog is 100%.

Group of orthologs #765. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:119

A8IWL0              	100.00%		B3L9G0              	100.00%
Bootstrap support for A8IWL0 as seed ortholog is 100%.
Bootstrap support for B3L9G0 as seed ortholog is 100%.

Group of orthologs #766. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:119

A8J846              	100.00%		B3L3I6              	100.00%
Bootstrap support for A8J846 as seed ortholog is 100%.
Bootstrap support for B3L3I6 as seed ortholog is 100%.

Group of orthologs #767. Best score 119 bits
Score difference with first non-orthologous sequence - C.reinhardtii:119 P.knowlesi:119

A8JJH8              	100.00%		B3L3L2              	100.00%
Bootstrap support for A8JJH8 as seed ortholog is 100%.
Bootstrap support for B3L3L2 as seed ortholog is 100%.

Group of orthologs #768. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.knowlesi:118

A8HVL4              	100.00%		B3LCU7              	100.00%
Bootstrap support for A8HVL4 as seed ortholog is 100%.
Bootstrap support for B3LCU7 as seed ortholog is 100%.

Group of orthologs #769. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.knowlesi:118

A8J757              	100.00%		B3KYX5              	100.00%
Bootstrap support for A8J757 as seed ortholog is 100%.
Bootstrap support for B3KYX5 as seed ortholog is 100%.

Group of orthologs #770. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.knowlesi:118

A8IYZ2              	100.00%		B3L891              	100.00%
Bootstrap support for A8IYZ2 as seed ortholog is 100%.
Bootstrap support for B3L891 as seed ortholog is 100%.

Group of orthologs #771. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.knowlesi:118

A8J951              	100.00%		B3LAD1              	100.00%
Bootstrap support for A8J951 as seed ortholog is 100%.
Bootstrap support for B3LAD1 as seed ortholog is 100%.

Group of orthologs #772. Best score 118 bits
Score difference with first non-orthologous sequence - C.reinhardtii:118 P.knowlesi:118

A8JH99              	100.00%		B3LA38              	100.00%
Bootstrap support for A8JH99 as seed ortholog is 100%.
Bootstrap support for B3LA38 as seed ortholog is 100%.

Group of orthologs #773. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.knowlesi:117

A8J576              	100.00%		B3LBP5              	100.00%
A8J0V6              	26.98%		
Bootstrap support for A8J576 as seed ortholog is 100%.
Bootstrap support for B3LBP5 as seed ortholog is 100%.

Group of orthologs #774. Best score 117 bits
Score difference with first non-orthologous sequence - C.reinhardtii:117 P.knowlesi:117

A8J6I6              	100.00%		B3L544              	100.00%
Bootstrap support for A8J6I6 as seed ortholog is 100%.
Bootstrap support for B3L544 as seed ortholog is 100%.

Group of orthologs #775. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8HQE3              	100.00%		B3LA03              	100.00%
Bootstrap support for A8HQE3 as seed ortholog is 100%.
Bootstrap support for B3LA03 as seed ortholog is 100%.

Group of orthologs #776. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8IG64              	100.00%		B3L1H3              	100.00%
Bootstrap support for A8IG64 as seed ortholog is 100%.
Bootstrap support for B3L1H3 as seed ortholog is 100%.

Group of orthologs #777. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8HX36              	100.00%		B3LAA1              	100.00%
Bootstrap support for A8HX36 as seed ortholog is 100%.
Bootstrap support for B3LAA1 as seed ortholog is 100%.

Group of orthologs #778. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8IRR6              	100.00%		B3L372              	100.00%
Bootstrap support for A8IRR6 as seed ortholog is 100%.
Bootstrap support for B3L372 as seed ortholog is 100%.

Group of orthologs #779. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8I678              	100.00%		B3LAG4              	100.00%
Bootstrap support for A8I678 as seed ortholog is 100%.
Bootstrap support for B3LAG4 as seed ortholog is 100%.

Group of orthologs #780. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8IXY0              	100.00%		B3L4N5              	100.00%
Bootstrap support for A8IXY0 as seed ortholog is 100%.
Bootstrap support for B3L4N5 as seed ortholog is 100%.

Group of orthologs #781. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:73

A8J9T0              	100.00%		B3L4C6              	100.00%
Bootstrap support for A8J9T0 as seed ortholog is 100%.
Bootstrap support for B3L4C6 as seed ortholog is 99%.

Group of orthologs #782. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:116

A8JF84              	100.00%		B3L560              	100.00%
Bootstrap support for A8JF84 as seed ortholog is 100%.
Bootstrap support for B3L560 as seed ortholog is 100%.

Group of orthologs #783. Best score 116 bits
Score difference with first non-orthologous sequence - C.reinhardtii:116 P.knowlesi:34

A8JCX6              	100.00%		B3LC27              	100.00%
Bootstrap support for A8JCX6 as seed ortholog is 100%.
Bootstrap support for B3LC27 as seed ortholog is 74%.
Alternative seed ortholog is B3L241 (34 bits away from this cluster)

Group of orthologs #784. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.knowlesi:67

A8IDT8              	100.00%		B3L728              	100.00%
A8J2I0              	7.05%		B3LAR8              	26.88%
                    	       		B3L159              	6.34%
Bootstrap support for A8IDT8 as seed ortholog is 99%.
Bootstrap support for B3L728 as seed ortholog is 89%.

Group of orthologs #785. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.knowlesi:115

A8HQ01              	100.00%		B3LBH0              	100.00%
Bootstrap support for A8HQ01 as seed ortholog is 100%.
Bootstrap support for B3LBH0 as seed ortholog is 100%.

Group of orthologs #786. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.knowlesi:115

A8IYP2              	100.00%		B3L404              	100.00%
Bootstrap support for A8IYP2 as seed ortholog is 98%.
Bootstrap support for B3L404 as seed ortholog is 100%.

Group of orthologs #787. Best score 115 bits
Score difference with first non-orthologous sequence - C.reinhardtii:115 P.knowlesi:115

A8J7Z6              	100.00%		B3L7I6              	100.00%
Bootstrap support for A8J7Z6 as seed ortholog is 100%.
Bootstrap support for B3L7I6 as seed ortholog is 100%.

Group of orthologs #788. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.knowlesi:114

A8HXX4              	100.00%		B3L3N5              	100.00%
A8HY41              	7.75%		
Bootstrap support for A8HXX4 as seed ortholog is 100%.
Bootstrap support for B3L3N5 as seed ortholog is 100%.

Group of orthologs #789. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.knowlesi:114

A8IZB3              	100.00%		B3L2S2              	100.00%
A8JFV4              	8.94%		
Bootstrap support for A8IZB3 as seed ortholog is 100%.
Bootstrap support for B3L2S2 as seed ortholog is 100%.

Group of orthologs #790. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.knowlesi:114

A8J1X5              	100.00%		B3L2Z4              	100.00%
A8IVY4              	32.80%		
Bootstrap support for A8J1X5 as seed ortholog is 100%.
Bootstrap support for B3L2Z4 as seed ortholog is 100%.

Group of orthologs #791. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:114 P.knowlesi:114

A8IW48              	100.00%		B3L267              	100.00%
Bootstrap support for A8IW48 as seed ortholog is 100%.
Bootstrap support for B3L267 as seed ortholog is 100%.

Group of orthologs #792. Best score 114 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.knowlesi:114

A8IGG2              	100.00%		B3L9Y0              	100.00%
Bootstrap support for A8IGG2 as seed ortholog is 97%.
Bootstrap support for B3L9Y0 as seed ortholog is 100%.

Group of orthologs #793. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.knowlesi:113

A8HP79              	100.00%		B3L2L4              	100.00%
Bootstrap support for A8HP79 as seed ortholog is 100%.
Bootstrap support for B3L2L4 as seed ortholog is 100%.

Group of orthologs #794. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.knowlesi:113

A8ITP7              	100.00%		B3LD72              	100.00%
Bootstrap support for A8ITP7 as seed ortholog is 100%.
Bootstrap support for B3LD72 as seed ortholog is 100%.

Group of orthologs #795. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.knowlesi:113

A8JBG7              	100.00%		B3L8R3              	100.00%
Bootstrap support for A8JBG7 as seed ortholog is 100%.
Bootstrap support for B3L8R3 as seed ortholog is 100%.

Group of orthologs #796. Best score 113 bits
Score difference with first non-orthologous sequence - C.reinhardtii:113 P.knowlesi:113

A8JFU2              	100.00%		B3L530              	100.00%
Bootstrap support for A8JFU2 as seed ortholog is 100%.
Bootstrap support for B3L530 as seed ortholog is 100%.

Group of orthologs #797. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.knowlesi:112

A8IIS4              	100.00%		B3KZF9              	100.00%
A8IZB7              	5.73%		
Bootstrap support for A8IIS4 as seed ortholog is 100%.
Bootstrap support for B3KZF9 as seed ortholog is 100%.

Group of orthologs #798. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.knowlesi:112

A8HW92              	100.00%		B3L1F0              	100.00%
Bootstrap support for A8HW92 as seed ortholog is 100%.
Bootstrap support for B3L1F0 as seed ortholog is 100%.

Group of orthologs #799. Best score 112 bits
Score difference with first non-orthologous sequence - C.reinhardtii:112 P.knowlesi:112

A8ILG8              	100.00%		B3L6N2              	100.00%
Bootstrap support for A8ILG8 as seed ortholog is 100%.
Bootstrap support for B3L6N2 as seed ortholog is 100%.

Group of orthologs #800. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:111

A8HT40              	100.00%		B3L6N7              	100.00%
Bootstrap support for A8HT40 as seed ortholog is 100%.
Bootstrap support for B3L6N7 as seed ortholog is 100%.

Group of orthologs #801. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:111

A8ICB0              	100.00%		B3L7N4              	100.00%
Bootstrap support for A8ICB0 as seed ortholog is 100%.
Bootstrap support for B3L7N4 as seed ortholog is 100%.

Group of orthologs #802. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:111

A8IVC2              	100.00%		B3L4J9              	100.00%
Bootstrap support for A8IVC2 as seed ortholog is 100%.
Bootstrap support for B3L4J9 as seed ortholog is 100%.

Group of orthologs #803. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:111

A8ICX2              	100.00%		B3LBX2              	100.00%
Bootstrap support for A8ICX2 as seed ortholog is 100%.
Bootstrap support for B3LBX2 as seed ortholog is 100%.

Group of orthologs #804. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.knowlesi:111

A8IZM7              	100.00%		B3L8B5              	100.00%
Bootstrap support for A8IZM7 as seed ortholog is 97%.
Bootstrap support for B3L8B5 as seed ortholog is 100%.

Group of orthologs #805. Best score 111 bits
Score difference with first non-orthologous sequence - C.reinhardtii:111 P.knowlesi:111

A8J7N7              	100.00%		B3L596              	100.00%
Bootstrap support for A8J7N7 as seed ortholog is 100%.
Bootstrap support for B3L596 as seed ortholog is 100%.

Group of orthologs #806. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:110

A8HMG8              	100.00%		B3L2R0              	100.00%
Bootstrap support for A8HMG8 as seed ortholog is 100%.
Bootstrap support for B3L2R0 as seed ortholog is 100%.

Group of orthologs #807. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:110

A8IIF1              	100.00%		B3L4N3              	100.00%
Bootstrap support for A8IIF1 as seed ortholog is 100%.
Bootstrap support for B3L4N3 as seed ortholog is 100%.

Group of orthologs #808. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:110

A8IUN8              	100.00%		B3L1T8              	100.00%
Bootstrap support for A8IUN8 as seed ortholog is 100%.
Bootstrap support for B3L1T8 as seed ortholog is 100%.

Group of orthologs #809. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:110

A8IUV7              	100.00%		B3LC67              	100.00%
Bootstrap support for A8IUV7 as seed ortholog is 100%.
Bootstrap support for B3LC67 as seed ortholog is 100%.

Group of orthologs #810. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:110

A8JI94              	100.00%		B3L174              	100.00%
Bootstrap support for A8JI94 as seed ortholog is 100%.
Bootstrap support for B3L174 as seed ortholog is 100%.

Group of orthologs #811. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:110

A8JGE8              	100.00%		B3L8G7              	100.00%
Bootstrap support for A8JGE8 as seed ortholog is 100%.
Bootstrap support for B3L8G7 as seed ortholog is 100%.

Group of orthologs #812. Best score 110 bits
Score difference with first non-orthologous sequence - C.reinhardtii:110 P.knowlesi:9

A8JH05              	100.00%		B3L7Y8              	100.00%
Bootstrap support for A8JH05 as seed ortholog is 100%.
Bootstrap support for B3L7Y8 as seed ortholog is 68%.
Alternative seed ortholog is B3L4F5 (9 bits away from this cluster)

Group of orthologs #813. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.knowlesi:109

A8HUN2              	100.00%		B3L6N9              	100.00%
Bootstrap support for A8HUN2 as seed ortholog is 99%.
Bootstrap support for B3L6N9 as seed ortholog is 100%.

Group of orthologs #814. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.knowlesi:109

A8J266              	100.00%		B3KZ77              	100.00%
Bootstrap support for A8J266 as seed ortholog is 100%.
Bootstrap support for B3KZ77 as seed ortholog is 100%.

Group of orthologs #815. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.knowlesi:39

A8J3B0              	100.00%		B3KZB4              	100.00%
Bootstrap support for A8J3B0 as seed ortholog is 91%.
Bootstrap support for B3KZB4 as seed ortholog is 87%.

Group of orthologs #816. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.knowlesi:109

A8J7D5              	100.00%		B3L1B3              	100.00%
Bootstrap support for A8J7D5 as seed ortholog is 100%.
Bootstrap support for B3L1B3 as seed ortholog is 100%.

Group of orthologs #817. Best score 109 bits
Score difference with first non-orthologous sequence - C.reinhardtii:109 P.knowlesi:109

A8JE35              	100.00%		B3L2K0              	100.00%
Bootstrap support for A8JE35 as seed ortholog is 100%.
Bootstrap support for B3L2K0 as seed ortholog is 100%.

Group of orthologs #818. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8J274              	100.00%		B3L6A8              	100.00%
A8J044              	19.57%		
Bootstrap support for A8J274 as seed ortholog is 100%.
Bootstrap support for B3L6A8 as seed ortholog is 100%.

Group of orthologs #819. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8HPX6              	100.00%		B3LD96              	100.00%
Bootstrap support for A8HPX6 as seed ortholog is 100%.
Bootstrap support for B3LD96 as seed ortholog is 100%.

Group of orthologs #820. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8IMS6              	100.00%		B3L2K7              	100.00%
Bootstrap support for A8IMS6 as seed ortholog is 100%.
Bootstrap support for B3L2K7 as seed ortholog is 100%.

Group of orthologs #821. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:33 P.knowlesi:108

A8HYK4              	100.00%		B3LD51              	100.00%
Bootstrap support for A8HYK4 as seed ortholog is 79%.
Bootstrap support for B3LD51 as seed ortholog is 100%.

Group of orthologs #822. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.knowlesi:66

A8ISA5              	100.00%		B3L7E6              	100.00%
Bootstrap support for A8ISA5 as seed ortholog is 74%.
Alternative seed ortholog is A8J019 (7 bits away from this cluster)
Bootstrap support for B3L7E6 as seed ortholog is 98%.

Group of orthologs #823. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8IQC1              	100.00%		B3L9F7              	100.00%
Bootstrap support for A8IQC1 as seed ortholog is 100%.
Bootstrap support for B3L9F7 as seed ortholog is 100%.

Group of orthologs #824. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8JB22              	100.00%		B3L1L6              	100.00%
Bootstrap support for A8JB22 as seed ortholog is 100%.
Bootstrap support for B3L1L6 as seed ortholog is 100%.

Group of orthologs #825. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8J2W3              	100.00%		B3LBB5              	100.00%
Bootstrap support for A8J2W3 as seed ortholog is 100%.
Bootstrap support for B3LBB5 as seed ortholog is 100%.

Group of orthologs #826. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8JHA6              	100.00%		B3L307              	100.00%
Bootstrap support for A8JHA6 as seed ortholog is 100%.
Bootstrap support for B3L307 as seed ortholog is 100%.

Group of orthologs #827. Best score 108 bits
Score difference with first non-orthologous sequence - C.reinhardtii:108 P.knowlesi:108

A8JII7              	100.00%		B3L964              	100.00%
Bootstrap support for A8JII7 as seed ortholog is 100%.
Bootstrap support for B3L964 as seed ortholog is 100%.

Group of orthologs #828. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.knowlesi:107

A8I7Y8              	100.00%		B3KZG4              	100.00%
Bootstrap support for A8I7Y8 as seed ortholog is 100%.
Bootstrap support for B3KZG4 as seed ortholog is 100%.

Group of orthologs #829. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.knowlesi:107

A8IWU0              	100.00%		B3L246              	100.00%
Bootstrap support for A8IWU0 as seed ortholog is 100%.
Bootstrap support for B3L246 as seed ortholog is 100%.

Group of orthologs #830. Best score 107 bits
Score difference with first non-orthologous sequence - C.reinhardtii:107 P.knowlesi:107

Q9ATG8              	100.00%		B3L6X2              	100.00%
Bootstrap support for Q9ATG8 as seed ortholog is 100%.
Bootstrap support for B3L6X2 as seed ortholog is 100%.

Group of orthologs #831. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.knowlesi:106

A8IWN9              	100.00%		B3LBG7              	100.00%
A8IFX2              	5.74%		
Bootstrap support for A8IWN9 as seed ortholog is 100%.
Bootstrap support for B3LBG7 as seed ortholog is 100%.

Group of orthologs #832. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.knowlesi:106

A8I3E7              	100.00%		B3L0U7              	100.00%
Bootstrap support for A8I3E7 as seed ortholog is 100%.
Bootstrap support for B3L0U7 as seed ortholog is 100%.

Group of orthologs #833. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.knowlesi:106

A8HSI6              	100.00%		B3L8R0              	100.00%
Bootstrap support for A8HSI6 as seed ortholog is 100%.
Bootstrap support for B3L8R0 as seed ortholog is 100%.

Group of orthologs #834. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.knowlesi:106

A8IDN1              	100.00%		B3LCE8              	100.00%
Bootstrap support for A8IDN1 as seed ortholog is 99%.
Bootstrap support for B3LCE8 as seed ortholog is 100%.

Group of orthologs #835. Best score 106 bits
Score difference with first non-orthologous sequence - C.reinhardtii:106 P.knowlesi:106

A8J4Q3              	100.00%		B3L087              	100.00%
Bootstrap support for A8J4Q3 as seed ortholog is 100%.
Bootstrap support for B3L087 as seed ortholog is 100%.

Group of orthologs #836. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.knowlesi:105

A8IF73              	100.00%		B3L4W5              	100.00%
Bootstrap support for A8IF73 as seed ortholog is 100%.
Bootstrap support for B3L4W5 as seed ortholog is 100%.

Group of orthologs #837. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.knowlesi:105

A8J1C2              	100.00%		B3LC41              	100.00%
Bootstrap support for A8J1C2 as seed ortholog is 100%.
Bootstrap support for B3LC41 as seed ortholog is 100%.

Group of orthologs #838. Best score 105 bits
Score difference with first non-orthologous sequence - C.reinhardtii:105 P.knowlesi:105

A8JIF2              	100.00%		B3L2C7              	100.00%
Bootstrap support for A8JIF2 as seed ortholog is 100%.
Bootstrap support for B3L2C7 as seed ortholog is 100%.

Group of orthologs #839. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.knowlesi:104

A8HN61              	100.00%		B3L050              	100.00%
Bootstrap support for A8HN61 as seed ortholog is 100%.
Bootstrap support for B3L050 as seed ortholog is 100%.

Group of orthologs #840. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.knowlesi:104

A8I1C7              	100.00%		B3KZI5              	100.00%
Bootstrap support for A8I1C7 as seed ortholog is 100%.
Bootstrap support for B3KZI5 as seed ortholog is 100%.

Group of orthologs #841. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.knowlesi:104

A8IIP4              	100.00%		B3LB32              	100.00%
Bootstrap support for A8IIP4 as seed ortholog is 100%.
Bootstrap support for B3LB32 as seed ortholog is 100%.

Group of orthologs #842. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.knowlesi:104

A8J834              	100.00%		B3L576              	100.00%
Bootstrap support for A8J834 as seed ortholog is 100%.
Bootstrap support for B3L576 as seed ortholog is 100%.

Group of orthologs #843. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.knowlesi:104

A8J3F8              	100.00%		B3LAK7              	100.00%
Bootstrap support for A8J3F8 as seed ortholog is 100%.
Bootstrap support for B3LAK7 as seed ortholog is 100%.

Group of orthologs #844. Best score 104 bits
Score difference with first non-orthologous sequence - C.reinhardtii:104 P.knowlesi:104

A8J8S7              	100.00%		B3LDF1              	100.00%
Bootstrap support for A8J8S7 as seed ortholog is 100%.
Bootstrap support for B3LDF1 as seed ortholog is 100%.

Group of orthologs #845. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.knowlesi:103

A8IY95              	100.00%		B3L1V9              	100.00%
Bootstrap support for A8IY95 as seed ortholog is 57%.
Alternative seed ortholog is Q9SWQ6 (4 bits away from this cluster)
Bootstrap support for B3L1V9 as seed ortholog is 100%.

Group of orthologs #846. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.knowlesi:103

A8J2V3              	100.00%		B3L8P9              	100.00%
Bootstrap support for A8J2V3 as seed ortholog is 100%.
Bootstrap support for B3L8P9 as seed ortholog is 100%.

Group of orthologs #847. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.knowlesi:103

A8JAR5              	100.00%		B3L268              	100.00%
Bootstrap support for A8JAR5 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 100%.

Group of orthologs #848. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:103 P.knowlesi:103

A8J6Y8              	100.00%		B3L7H7              	100.00%
Bootstrap support for A8J6Y8 as seed ortholog is 100%.
Bootstrap support for B3L7H7 as seed ortholog is 100%.

Group of orthologs #849. Best score 103 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.knowlesi:103

Q7Y0H2              	100.00%		B3L9X5              	100.00%
Bootstrap support for Q7Y0H2 as seed ortholog is 99%.
Bootstrap support for B3L9X5 as seed ortholog is 100%.

Group of orthologs #850. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

A8HXN9              	100.00%		B3KZQ6              	100.00%
Bootstrap support for A8HXN9 as seed ortholog is 100%.
Bootstrap support for B3KZQ6 as seed ortholog is 100%.

Group of orthologs #851. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

A8IFM6              	100.00%		B3LB79              	100.00%
Bootstrap support for A8IFM6 as seed ortholog is 100%.
Bootstrap support for B3LB79 as seed ortholog is 100%.

Group of orthologs #852. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

A8J1W0              	100.00%		B3L085              	100.00%
Bootstrap support for A8J1W0 as seed ortholog is 100%.
Bootstrap support for B3L085 as seed ortholog is 100%.

Group of orthologs #853. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

A8IY22              	100.00%		B3L418              	100.00%
Bootstrap support for A8IY22 as seed ortholog is 100%.
Bootstrap support for B3L418 as seed ortholog is 100%.

Group of orthologs #854. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

A8JHU5              	100.00%		B3L1K5              	100.00%
Bootstrap support for A8JHU5 as seed ortholog is 100%.
Bootstrap support for B3L1K5 as seed ortholog is 100%.

Group of orthologs #855. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

A8JDW9              	100.00%		B3L973              	100.00%
Bootstrap support for A8JDW9 as seed ortholog is 100%.
Bootstrap support for B3L973 as seed ortholog is 100%.

Group of orthologs #856. Best score 102 bits
Score difference with first non-orthologous sequence - C.reinhardtii:102 P.knowlesi:102

Q9ZTA7              	100.00%		B3L243              	100.00%
Bootstrap support for Q9ZTA7 as seed ortholog is 100%.
Bootstrap support for B3L243 as seed ortholog is 100%.

Group of orthologs #857. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:101

A8IWW7              	100.00%		B3L9U0              	100.00%
O22448              	23.43%		B3LBA8              	85.07%
P83564              	16.83%		
A8IIG3              	6.60%		
Bootstrap support for A8IWW7 as seed ortholog is 100%.
Bootstrap support for B3L9U0 as seed ortholog is 100%.

Group of orthologs #858. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:101

A8HTQ0              	100.00%		B3KZ43              	100.00%
                    	       		B3L336              	37.04%
                    	       		B3L0Y4              	35.98%
                    	       		B3L1R3              	32.80%
Bootstrap support for A8HTQ0 as seed ortholog is 100%.
Bootstrap support for B3KZ43 as seed ortholog is 100%.

Group of orthologs #859. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:25 P.knowlesi:101

A8J0Z0              	100.00%		B3LD21              	100.00%
A8J0Y9              	53.96%		
Bootstrap support for A8J0Z0 as seed ortholog is 85%.
Bootstrap support for B3LD21 as seed ortholog is 100%.

Group of orthologs #860. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:101

A8HQH6              	100.00%		B3L2Z0              	100.00%
Bootstrap support for A8HQH6 as seed ortholog is 100%.
Bootstrap support for B3L2Z0 as seed ortholog is 100%.

Group of orthologs #861. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:101

A8I0Q7              	100.00%		B3L3R9              	100.00%
Bootstrap support for A8I0Q7 as seed ortholog is 100%.
Bootstrap support for B3L3R9 as seed ortholog is 100%.

Group of orthologs #862. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:101

A8J1G4              	100.00%		B3L720              	100.00%
Bootstrap support for A8J1G4 as seed ortholog is 100%.
Bootstrap support for B3L720 as seed ortholog is 100%.

Group of orthologs #863. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:26 P.knowlesi:101

A8J3W4              	100.00%		B3L9Q0              	100.00%
Bootstrap support for A8J3W4 as seed ortholog is 88%.
Bootstrap support for B3L9Q0 as seed ortholog is 100%.

Group of orthologs #864. Best score 101 bits
Score difference with first non-orthologous sequence - C.reinhardtii:101 P.knowlesi:101

A8J3W3              	100.00%		B3LAB4              	100.00%
Bootstrap support for A8J3W3 as seed ortholog is 100%.
Bootstrap support for B3LAB4 as seed ortholog is 100%.

Group of orthologs #865. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.knowlesi:100

A8I8Z4              	100.00%		B3LB88              	100.00%
A8J987              	7.85%		
Bootstrap support for A8I8Z4 as seed ortholog is 100%.
Bootstrap support for B3LB88 as seed ortholog is 100%.

Group of orthologs #866. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.knowlesi:100

A8IV17              	100.00%		B3L766              	100.00%
Bootstrap support for A8IV17 as seed ortholog is 100%.
Bootstrap support for B3L766 as seed ortholog is 100%.

Group of orthologs #867. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.knowlesi:44

A8IZR5              	100.00%		B3L9J3              	100.00%
Bootstrap support for A8IZR5 as seed ortholog is 20%.
Alternative seed ortholog is A8IYP5 (15 bits away from this cluster)
Bootstrap support for B3L9J3 as seed ortholog is 98%.

Group of orthologs #868. Best score 100 bits
Score difference with first non-orthologous sequence - C.reinhardtii:100 P.knowlesi:100

A8JET7              	100.00%		B3L1H2              	100.00%
Bootstrap support for A8JET7 as seed ortholog is 100%.
Bootstrap support for B3L1H2 as seed ortholog is 100%.

Group of orthologs #869. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8J6G9              	100.00%		B3L4Q8              	100.00%
A8ICE4              	11.65%		
Bootstrap support for A8J6G9 as seed ortholog is 100%.
Bootstrap support for B3L4Q8 as seed ortholog is 100%.

Group of orthologs #870. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8JEL2              	100.00%		B3L098              	100.00%
A8HS63              	26.33%		
Bootstrap support for A8JEL2 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #871. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8HQD2              	100.00%		B3L8M6              	100.00%
Bootstrap support for A8HQD2 as seed ortholog is 100%.
Bootstrap support for B3L8M6 as seed ortholog is 100%.

Group of orthologs #872. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8HZP7              	100.00%		B3L7V0              	100.00%
Bootstrap support for A8HZP7 as seed ortholog is 100%.
Bootstrap support for B3L7V0 as seed ortholog is 100%.

Group of orthologs #873. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8INM9              	100.00%		B3L7R1              	100.00%
Bootstrap support for A8INM9 as seed ortholog is 100%.
Bootstrap support for B3L7R1 as seed ortholog is 100%.

Group of orthologs #874. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8IR66              	100.00%		B3L917              	100.00%
Bootstrap support for A8IR66 as seed ortholog is 100%.
Bootstrap support for B3L917 as seed ortholog is 100%.

Group of orthologs #875. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8J8P4              	100.00%		B3KZ52              	100.00%
Bootstrap support for A8J8P4 as seed ortholog is 100%.
Bootstrap support for B3KZ52 as seed ortholog is 100%.

Group of orthologs #876. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8JCT0              	100.00%		B3L9G7              	100.00%
Bootstrap support for A8JCT0 as seed ortholog is 100%.
Bootstrap support for B3L9G7 as seed ortholog is 100%.

Group of orthologs #877. Best score 99 bits
Score difference with first non-orthologous sequence - C.reinhardtii:99 P.knowlesi:99

A8JGX7              	100.00%		B3LBN4              	100.00%
Bootstrap support for A8JGX7 as seed ortholog is 100%.
Bootstrap support for B3LBN4 as seed ortholog is 100%.

Group of orthologs #878. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.knowlesi:98

A8J193              	100.00%		B3KZ42              	100.00%
                    	       		B3L8U5              	5.98%
Bootstrap support for A8J193 as seed ortholog is 100%.
Bootstrap support for B3KZ42 as seed ortholog is 100%.

Group of orthologs #879. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.knowlesi:98

A8J1F9              	100.00%		B3L1B4              	100.00%
Bootstrap support for A8J1F9 as seed ortholog is 100%.
Bootstrap support for B3L1B4 as seed ortholog is 100%.

Group of orthologs #880. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.knowlesi:98

A8J2V4              	100.00%		B3L9Y4              	100.00%
Bootstrap support for A8J2V4 as seed ortholog is 100%.
Bootstrap support for B3L9Y4 as seed ortholog is 100%.

Group of orthologs #881. Best score 98 bits
Score difference with first non-orthologous sequence - C.reinhardtii:98 P.knowlesi:98

A8J9X6              	100.00%		B3L7R7              	100.00%
Bootstrap support for A8J9X6 as seed ortholog is 100%.
Bootstrap support for B3L7R7 as seed ortholog is 100%.

Group of orthologs #882. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

P93106              	100.00%		B3L7M3              	100.00%
A8JHU0              	45.24%		B3L8Y6              	30.54%
                    	       		B3L8Y3              	27.24%
Bootstrap support for P93106 as seed ortholog is 100%.
Bootstrap support for B3L7M3 as seed ortholog is 100%.

Group of orthologs #883. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8I243              	100.00%		B3L7P2              	100.00%
Bootstrap support for A8I243 as seed ortholog is 100%.
Bootstrap support for B3L7P2 as seed ortholog is 100%.

Group of orthologs #884. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8IME8              	100.00%		B3L0U0              	100.00%
Bootstrap support for A8IME8 as seed ortholog is 100%.
Bootstrap support for B3L0U0 as seed ortholog is 100%.

Group of orthologs #885. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8HQY5              	100.00%		B3LD31              	100.00%
Bootstrap support for A8HQY5 as seed ortholog is 100%.
Bootstrap support for B3LD31 as seed ortholog is 100%.

Group of orthologs #886. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8IQT7              	100.00%		B3LBC5              	100.00%
Bootstrap support for A8IQT7 as seed ortholog is 100%.
Bootstrap support for B3LBC5 as seed ortholog is 100%.

Group of orthologs #887. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8IU79              	100.00%		B3LBY0              	100.00%
Bootstrap support for A8IU79 as seed ortholog is 100%.
Bootstrap support for B3LBY0 as seed ortholog is 100%.

Group of orthologs #888. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.knowlesi:97

A8J5M2              	100.00%		B3L8U3              	100.00%
Bootstrap support for A8J5M2 as seed ortholog is 68%.
Alternative seed ortholog is A8I1B6 (18 bits away from this cluster)
Bootstrap support for B3L8U3 as seed ortholog is 100%.

Group of orthologs #889. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8JBU3              	100.00%		B3L8W9              	100.00%
Bootstrap support for A8JBU3 as seed ortholog is 100%.
Bootstrap support for B3L8W9 as seed ortholog is 100%.

Group of orthologs #890. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:97 P.knowlesi:97

A8JBL9              	100.00%		B3L970              	100.00%
Bootstrap support for A8JBL9 as seed ortholog is 100%.
Bootstrap support for B3L970 as seed ortholog is 100%.

Group of orthologs #891. Best score 97 bits
Score difference with first non-orthologous sequence - C.reinhardtii:27 P.knowlesi:97

Q39568              	100.00%		B3L3J9              	100.00%
Bootstrap support for Q39568 as seed ortholog is 56%.
Alternative seed ortholog is A8J6M6 (27 bits away from this cluster)
Bootstrap support for B3L3J9 as seed ortholog is 100%.

Group of orthologs #892. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:96

A8HNP9              	100.00%		B3L2Q3              	100.00%
Bootstrap support for A8HNP9 as seed ortholog is 100%.
Bootstrap support for B3L2Q3 as seed ortholog is 100%.

Group of orthologs #893. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:96

A8I5Y2              	100.00%		B3L090              	100.00%
Bootstrap support for A8I5Y2 as seed ortholog is 100%.
Bootstrap support for B3L090 as seed ortholog is 100%.

Group of orthologs #894. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:96

A8I0E2              	100.00%		B3L3B0              	100.00%
Bootstrap support for A8I0E2 as seed ortholog is 100%.
Bootstrap support for B3L3B0 as seed ortholog is 100%.

Group of orthologs #895. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:96

A8HP90              	100.00%		B3L8L0              	100.00%
Bootstrap support for A8HP90 as seed ortholog is 100%.
Bootstrap support for B3L8L0 as seed ortholog is 100%.

Group of orthologs #896. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.knowlesi:46

A8I3M4              	100.00%		B3L638              	100.00%
Bootstrap support for A8I3M4 as seed ortholog is 97%.
Bootstrap support for B3L638 as seed ortholog is 99%.

Group of orthologs #897. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.knowlesi:3

A8IHH6              	100.00%		B3L3P4              	100.00%
Bootstrap support for A8IHH6 as seed ortholog is 67%.
Alternative seed ortholog is A8JBA5 (10 bits away from this cluster)
Bootstrap support for B3L3P4 as seed ortholog is 50%.
Alternative seed ortholog is B3L9F0 (3 bits away from this cluster)

Group of orthologs #898. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:96

A8I6D1              	100.00%		B3LAP2              	100.00%
Bootstrap support for A8I6D1 as seed ortholog is 100%.
Bootstrap support for B3LAP2 as seed ortholog is 100%.

Group of orthologs #899. Best score 96 bits
Score difference with first non-orthologous sequence - C.reinhardtii:96 P.knowlesi:96

A8J308              	100.00%		B3L6U4              	100.00%
Bootstrap support for A8J308 as seed ortholog is 100%.
Bootstrap support for B3L6U4 as seed ortholog is 100%.

Group of orthologs #900. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.knowlesi:95

A8HSJ0              	100.00%		B3KZ26              	100.00%
Bootstrap support for A8HSJ0 as seed ortholog is 100%.
Bootstrap support for B3KZ26 as seed ortholog is 100%.

Group of orthologs #901. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.knowlesi:95

A8HR60              	100.00%		B3L8S7              	100.00%
Bootstrap support for A8HR60 as seed ortholog is 100%.
Bootstrap support for B3L8S7 as seed ortholog is 100%.

Group of orthologs #902. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.knowlesi:95

A8I3Q0              	100.00%		B3L591              	100.00%
Bootstrap support for A8I3Q0 as seed ortholog is 100%.
Bootstrap support for B3L591 as seed ortholog is 100%.

Group of orthologs #903. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.knowlesi:95

A8I303              	100.00%		B3L5Z9              	100.00%
Bootstrap support for A8I303 as seed ortholog is 96%.
Bootstrap support for B3L5Z9 as seed ortholog is 100%.

Group of orthologs #904. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.knowlesi:95

A8IA96              	100.00%		B3L492              	100.00%
Bootstrap support for A8IA96 as seed ortholog is 100%.
Bootstrap support for B3L492 as seed ortholog is 100%.

Group of orthologs #905. Best score 95 bits
Score difference with first non-orthologous sequence - C.reinhardtii:95 P.knowlesi:95

A8J795              	100.00%		B3L2Z2              	100.00%
Bootstrap support for A8J795 as seed ortholog is 100%.
Bootstrap support for B3L2Z2 as seed ortholog is 100%.

Group of orthologs #906. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8I424              	100.00%		B3LCH8              	100.00%
A8IFX8              	52.46%		
A8J502              	48.59%		
A8IZ39              	35.21%		
A8IUJ9              	12.85%		
A8I041              	9.51%		
Bootstrap support for A8I424 as seed ortholog is 100%.
Bootstrap support for B3LCH8 as seed ortholog is 100%.

Group of orthologs #907. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:20

A8JEQ5              	100.00%		B3LC98              	100.00%
A8J9I5              	9.05%		
A8JHG0              	5.43%		
A8JBP5              	5.03%		
Bootstrap support for A8JEQ5 as seed ortholog is 100%.
Bootstrap support for B3LC98 as seed ortholog is 90%.

Group of orthologs #908. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:19 P.knowlesi:94

A8I3E4              	100.00%		B3L8T1              	100.00%
Bootstrap support for A8I3E4 as seed ortholog is 78%.
Bootstrap support for B3L8T1 as seed ortholog is 100%.

Group of orthologs #909. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8IAZ4              	100.00%		B3L953              	100.00%
Bootstrap support for A8IAZ4 as seed ortholog is 100%.
Bootstrap support for B3L953 as seed ortholog is 100%.

Group of orthologs #910. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8IW91              	100.00%		B3L6A5              	100.00%
Bootstrap support for A8IW91 as seed ortholog is 100%.
Bootstrap support for B3L6A5 as seed ortholog is 100%.

Group of orthologs #911. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8J1W4              	100.00%		B3L4Z4              	100.00%
Bootstrap support for A8J1W4 as seed ortholog is 100%.
Bootstrap support for B3L4Z4 as seed ortholog is 100%.

Group of orthologs #912. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:36 P.knowlesi:33

A8J0N9              	100.00%		B3L8E3              	100.00%
Bootstrap support for A8J0N9 as seed ortholog is 92%.
Bootstrap support for B3L8E3 as seed ortholog is 89%.

Group of orthologs #913. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8IZ36              	100.00%		B3LAG6              	100.00%
Bootstrap support for A8IZ36 as seed ortholog is 100%.
Bootstrap support for B3LAG6 as seed ortholog is 100%.

Group of orthologs #914. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8JB53              	100.00%		B3L0N9              	100.00%
Bootstrap support for A8JB53 as seed ortholog is 100%.
Bootstrap support for B3L0N9 as seed ortholog is 100%.

Group of orthologs #915. Best score 94 bits
Score difference with first non-orthologous sequence - C.reinhardtii:94 P.knowlesi:94

A8J2L7              	100.00%		B3L8Y5              	100.00%
Bootstrap support for A8J2L7 as seed ortholog is 100%.
Bootstrap support for B3L8Y5 as seed ortholog is 100%.

Group of orthologs #916. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.knowlesi:93

A8INX6              	100.00%		B3L636              	100.00%
Bootstrap support for A8INX6 as seed ortholog is 84%.
Bootstrap support for B3L636 as seed ortholog is 100%.

Group of orthologs #917. Best score 93 bits
Score difference with first non-orthologous sequence - C.reinhardtii:93 P.knowlesi:93

A8J6G6              	100.00%		B3L6A3              	100.00%
Bootstrap support for A8J6G6 as seed ortholog is 100%.
Bootstrap support for B3L6A3 as seed ortholog is 100%.

Group of orthologs #918. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8HP31              	100.00%		B3L354              	100.00%
Bootstrap support for A8HP31 as seed ortholog is 100%.
Bootstrap support for B3L354 as seed ortholog is 100%.

Group of orthologs #919. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8I8K9              	100.00%		B3L399              	100.00%
Bootstrap support for A8I8K9 as seed ortholog is 100%.
Bootstrap support for B3L399 as seed ortholog is 100%.

Group of orthologs #920. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8IUW8              	100.00%		B3L0Z8              	100.00%
Bootstrap support for A8IUW8 as seed ortholog is 100%.
Bootstrap support for B3L0Z8 as seed ortholog is 100%.

Group of orthologs #921. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8IT97              	100.00%		B3L433              	100.00%
Bootstrap support for A8IT97 as seed ortholog is 100%.
Bootstrap support for B3L433 as seed ortholog is 100%.

Group of orthologs #922. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8IMT5              	100.00%		B3LA40              	100.00%
Bootstrap support for A8IMT5 as seed ortholog is 100%.
Bootstrap support for B3LA40 as seed ortholog is 100%.

Group of orthologs #923. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8IZN2              	100.00%		B3L925              	100.00%
Bootstrap support for A8IZN2 as seed ortholog is 100%.
Bootstrap support for B3L925 as seed ortholog is 100%.

Group of orthologs #924. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:29 P.knowlesi:39

A8J2F0              	100.00%		B3LC22              	100.00%
Bootstrap support for A8J2F0 as seed ortholog is 93%.
Bootstrap support for B3LC22 as seed ortholog is 97%.

Group of orthologs #925. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8J6E6              	100.00%		B3L9K6              	100.00%
Bootstrap support for A8J6E6 as seed ortholog is 100%.
Bootstrap support for B3L9K6 as seed ortholog is 100%.

Group of orthologs #926. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:92 P.knowlesi:92

A8JHU2              	100.00%		B3L4P5              	100.00%
Bootstrap support for A8JHU2 as seed ortholog is 100%.
Bootstrap support for B3L4P5 as seed ortholog is 100%.

Group of orthologs #927. Best score 92 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.knowlesi:92

A8JII1              	100.00%		B3LDB0              	100.00%
Bootstrap support for A8JII1 as seed ortholog is 85%.
Bootstrap support for B3LDB0 as seed ortholog is 100%.

Group of orthologs #928. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:16 P.knowlesi:91

A8HNL1              	100.00%		B3LA36              	100.00%
Bootstrap support for A8HNL1 as seed ortholog is 83%.
Bootstrap support for B3LA36 as seed ortholog is 100%.

Group of orthologs #929. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.knowlesi:91

A8I311              	100.00%		B3L8I8              	100.00%
Bootstrap support for A8I311 as seed ortholog is 100%.
Bootstrap support for B3L8I8 as seed ortholog is 100%.

Group of orthologs #930. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.knowlesi:91

A8J0V1              	100.00%		B3L6P4              	100.00%
Bootstrap support for A8J0V1 as seed ortholog is 100%.
Bootstrap support for B3L6P4 as seed ortholog is 100%.

Group of orthologs #931. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.knowlesi:91

A8JBT8              	100.00%		B3KZA0              	100.00%
Bootstrap support for A8JBT8 as seed ortholog is 100%.
Bootstrap support for B3KZA0 as seed ortholog is 100%.

Group of orthologs #932. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.knowlesi:91

A8J8Y6              	100.00%		B3LD50              	100.00%
Bootstrap support for A8J8Y6 as seed ortholog is 100%.
Bootstrap support for B3LD50 as seed ortholog is 100%.

Group of orthologs #933. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.knowlesi:91

A8JBE3              	100.00%		B3LBG9              	100.00%
Bootstrap support for A8JBE3 as seed ortholog is 100%.
Bootstrap support for B3LBG9 as seed ortholog is 100%.

Group of orthologs #934. Best score 91 bits
Score difference with first non-orthologous sequence - C.reinhardtii:91 P.knowlesi:91

A8JCX4              	100.00%		B3LAJ7              	100.00%
Bootstrap support for A8JCX4 as seed ortholog is 100%.
Bootstrap support for B3LAJ7 as seed ortholog is 100%.

Group of orthologs #935. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:22 P.knowlesi:90

A8J3A7              	100.00%		B3L6L2              	100.00%
A8J3A8              	100.00%		
Bootstrap support for A8J3A7 as seed ortholog is 93%.
Bootstrap support for A8J3A8 as seed ortholog is 89%.
Bootstrap support for B3L6L2 as seed ortholog is 100%.

Group of orthologs #936. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.knowlesi:90

A8I1P7              	100.00%		B3L1C0              	100.00%
Bootstrap support for A8I1P7 as seed ortholog is 100%.
Bootstrap support for B3L1C0 as seed ortholog is 100%.

Group of orthologs #937. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.knowlesi:90

A8IDS5              	100.00%		B3L444              	100.00%
Bootstrap support for A8IDS5 as seed ortholog is 100%.
Bootstrap support for B3L444 as seed ortholog is 100%.

Group of orthologs #938. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.knowlesi:90

A8JDK0              	100.00%		B3L687              	100.00%
Bootstrap support for A8JDK0 as seed ortholog is 100%.
Bootstrap support for B3L687 as seed ortholog is 100%.

Group of orthologs #939. Best score 90 bits
Score difference with first non-orthologous sequence - C.reinhardtii:90 P.knowlesi:90

A8JDV2              	100.00%		B3L7J1              	100.00%
Bootstrap support for A8JDV2 as seed ortholog is 100%.
Bootstrap support for B3L7J1 as seed ortholog is 100%.

Group of orthologs #940. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.knowlesi:89

A8I4N7              	100.00%		B3L0T6              	100.00%
Bootstrap support for A8I4N7 as seed ortholog is 100%.
Bootstrap support for B3L0T6 as seed ortholog is 100%.

Group of orthologs #941. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.knowlesi:89

A8J0D6              	100.00%		B3L0D1              	100.00%
Bootstrap support for A8J0D6 as seed ortholog is 100%.
Bootstrap support for B3L0D1 as seed ortholog is 100%.

Group of orthologs #942. Best score 89 bits
Score difference with first non-orthologous sequence - C.reinhardtii:89 P.knowlesi:89

A8J6Z3              	100.00%		B3L7G1              	100.00%
Bootstrap support for A8J6Z3 as seed ortholog is 100%.
Bootstrap support for B3L7G1 as seed ortholog is 100%.

Group of orthologs #943. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.knowlesi:88

A8HPG8              	100.00%		B3KZS8              	100.00%
A8HZQ4              	35.23%		
Bootstrap support for A8HPG8 as seed ortholog is 95%.
Bootstrap support for B3KZS8 as seed ortholog is 100%.

Group of orthologs #944. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.knowlesi:88

A8HXD0              	100.00%		B3L6U3              	100.00%
Bootstrap support for A8HXD0 as seed ortholog is 100%.
Bootstrap support for B3L6U3 as seed ortholog is 100%.

Group of orthologs #945. Best score 88 bits
Score difference with first non-orthologous sequence - C.reinhardtii:88 P.knowlesi:88

A8JDW7              	100.00%		B3L379              	100.00%
Bootstrap support for A8JDW7 as seed ortholog is 100%.
Bootstrap support for B3L379 as seed ortholog is 100%.

Group of orthologs #946. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8JGQ3              	100.00%		B3LDB9              	100.00%
A8JGJ0              	10.23%		B3L4X0              	19.44%
A8J8M1              	10.09%		
Bootstrap support for A8JGQ3 as seed ortholog is 100%.
Bootstrap support for B3LDB9 as seed ortholog is 100%.

Group of orthologs #947. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8J9U3              	100.00%		B3L1E4              	100.00%
A8JC80              	22.29%		
A8I7J0              	7.62%		
Bootstrap support for A8J9U3 as seed ortholog is 100%.
Bootstrap support for B3L1E4 as seed ortholog is 100%.

Group of orthologs #948. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8HYD5              	100.00%		B3L5D7              	100.00%
Bootstrap support for A8HYD5 as seed ortholog is 100%.
Bootstrap support for B3L5D7 as seed ortholog is 100%.

Group of orthologs #949. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8ICE1              	100.00%		B3L0D2              	100.00%
Bootstrap support for A8ICE1 as seed ortholog is 100%.
Bootstrap support for B3L0D2 as seed ortholog is 100%.

Group of orthologs #950. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8IRA8              	100.00%		B3L4K0              	100.00%
Bootstrap support for A8IRA8 as seed ortholog is 100%.
Bootstrap support for B3L4K0 as seed ortholog is 100%.

Group of orthologs #951. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8JFK9              	100.00%		B3L0N3              	100.00%
Bootstrap support for A8JFK9 as seed ortholog is 100%.
Bootstrap support for B3L0N3 as seed ortholog is 100%.

Group of orthologs #952. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8JGC0              	100.00%		B3L0B4              	100.00%
Bootstrap support for A8JGC0 as seed ortholog is 100%.
Bootstrap support for B3L0B4 as seed ortholog is 100%.

Group of orthologs #953. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8JCC6              	100.00%		B3L4I3              	100.00%
Bootstrap support for A8JCC6 as seed ortholog is 100%.
Bootstrap support for B3L4I3 as seed ortholog is 100%.

Group of orthologs #954. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8JGJ2              	100.00%		B3L571              	100.00%
Bootstrap support for A8JGJ2 as seed ortholog is 100%.
Bootstrap support for B3L571 as seed ortholog is 100%.

Group of orthologs #955. Best score 87 bits
Score difference with first non-orthologous sequence - C.reinhardtii:87 P.knowlesi:87

A8JFY5              	100.00%		B3LCU3              	100.00%
Bootstrap support for A8JFY5 as seed ortholog is 100%.
Bootstrap support for B3LCU3 as seed ortholog is 100%.

Group of orthologs #956. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:18

A8JBD8              	100.00%		B3L9L9              	100.00%
A8IRN9              	10.88%		
A8J587              	7.89%		
Bootstrap support for A8JBD8 as seed ortholog is 100%.
Bootstrap support for B3L9L9 as seed ortholog is 72%.
Alternative seed ortholog is B3LCA4 (18 bits away from this cluster)

Group of orthologs #957. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8IJP0              	100.00%		B3KZK2              	100.00%
A8HPR3              	29.82%		
Bootstrap support for A8IJP0 as seed ortholog is 100%.
Bootstrap support for B3KZK2 as seed ortholog is 100%.

Group of orthologs #958. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8HNX3              	100.00%		B3L554              	100.00%
Bootstrap support for A8HNX3 as seed ortholog is 100%.
Bootstrap support for B3L554 as seed ortholog is 100%.

Group of orthologs #959. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8IM89              	100.00%		B3KZH0              	100.00%
Bootstrap support for A8IM89 as seed ortholog is 100%.
Bootstrap support for B3KZH0 as seed ortholog is 100%.

Group of orthologs #960. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8IXG3              	100.00%		B3L5P5              	100.00%
Bootstrap support for A8IXG3 as seed ortholog is 100%.
Bootstrap support for B3L5P5 as seed ortholog is 100%.

Group of orthologs #961. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8J0R4              	100.00%		B3L4A3              	100.00%
Bootstrap support for A8J0R4 as seed ortholog is 100%.
Bootstrap support for B3L4A3 as seed ortholog is 100%.

Group of orthologs #962. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8JAC5              	100.00%		B3KZK5              	100.00%
Bootstrap support for A8JAC5 as seed ortholog is 100%.
Bootstrap support for B3KZK5 as seed ortholog is 100%.

Group of orthologs #963. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8J9N5              	100.00%		B3L1W2              	100.00%
Bootstrap support for A8J9N5 as seed ortholog is 100%.
Bootstrap support for B3L1W2 as seed ortholog is 100%.

Group of orthologs #964. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8JEV9              	100.00%		B3KZN0              	100.00%
Bootstrap support for A8JEV9 as seed ortholog is 100%.
Bootstrap support for B3KZN0 as seed ortholog is 100%.

Group of orthologs #965. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8JI10              	100.00%		B3L001              	100.00%
Bootstrap support for A8JI10 as seed ortholog is 100%.
Bootstrap support for B3L001 as seed ortholog is 100%.

Group of orthologs #966. Best score 86 bits
Score difference with first non-orthologous sequence - C.reinhardtii:86 P.knowlesi:86

A8JHY3              	100.00%		B3L4A1              	100.00%
Bootstrap support for A8JHY3 as seed ortholog is 100%.
Bootstrap support for B3L4A1 as seed ortholog is 100%.

Group of orthologs #967. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:18 P.knowlesi:33

A8IUC0              	100.00%		B3L506              	100.00%
A8HQP6              	12.29%		
A8JHG3              	6.24%		
Bootstrap support for A8IUC0 as seed ortholog is 54%.
Alternative seed ortholog is A8IF03 (18 bits away from this cluster)
Bootstrap support for B3L506 as seed ortholog is 81%.

Group of orthologs #968. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:85

A8HM72              	100.00%		B3LBJ2              	100.00%
Bootstrap support for A8HM72 as seed ortholog is 100%.
Bootstrap support for B3LBJ2 as seed ortholog is 100%.

Group of orthologs #969. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:85

A8HPM9              	100.00%		B3LD67              	100.00%
Bootstrap support for A8HPM9 as seed ortholog is 100%.
Bootstrap support for B3LD67 as seed ortholog is 100%.

Group of orthologs #970. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:85

A8I8A8              	100.00%		B3LA35              	100.00%
Bootstrap support for A8I8A8 as seed ortholog is 100%.
Bootstrap support for B3LA35 as seed ortholog is 100%.

Group of orthologs #971. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.knowlesi:85

A8J810              	100.00%		B3L0K9              	100.00%
Bootstrap support for A8J810 as seed ortholog is 91%.
Bootstrap support for B3L0K9 as seed ortholog is 100%.

Group of orthologs #972. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:85

A8J2K2              	100.00%		B3L6A4              	100.00%
Bootstrap support for A8J2K2 as seed ortholog is 100%.
Bootstrap support for B3L6A4 as seed ortholog is 100%.

Group of orthologs #973. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:38 P.knowlesi:39

A8JAT7              	100.00%		B3L3F4              	100.00%
Bootstrap support for A8JAT7 as seed ortholog is 65%.
Alternative seed ortholog is A8HMC5 (38 bits away from this cluster)
Bootstrap support for B3L3F4 as seed ortholog is 71%.
Alternative seed ortholog is B3L1G3 (39 bits away from this cluster)

Group of orthologs #974. Best score 85 bits
Score difference with first non-orthologous sequence - C.reinhardtii:85 P.knowlesi:85

A8J6B1              	100.00%		B3L7Y1              	100.00%
Bootstrap support for A8J6B1 as seed ortholog is 100%.
Bootstrap support for B3L7Y1 as seed ortholog is 100%.

Group of orthologs #975. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.knowlesi:84

A8HYJ4              	100.00%		B3L297              	100.00%
                    	       		B3LCQ3              	6.69%
Bootstrap support for A8HYJ4 as seed ortholog is 100%.
Bootstrap support for B3L297 as seed ortholog is 100%.

Group of orthologs #976. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.knowlesi:20

A8IQ65              	100.00%		B3L025              	100.00%
Bootstrap support for A8IQ65 as seed ortholog is 100%.
Bootstrap support for B3L025 as seed ortholog is 75%.

Group of orthologs #977. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.knowlesi:84

A8IHQ7              	100.00%		B3L987              	100.00%
Bootstrap support for A8IHQ7 as seed ortholog is 100%.
Bootstrap support for B3L987 as seed ortholog is 100%.

Group of orthologs #978. Best score 84 bits
Score difference with first non-orthologous sequence - C.reinhardtii:84 P.knowlesi:84

A8J8R7              	100.00%		B3L194              	100.00%
Bootstrap support for A8J8R7 as seed ortholog is 100%.
Bootstrap support for B3L194 as seed ortholog is 100%.

Group of orthologs #979. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.knowlesi:83

A8IE97              	100.00%		B3L7P4              	100.00%
Bootstrap support for A8IE97 as seed ortholog is 100%.
Bootstrap support for B3L7P4 as seed ortholog is 100%.

Group of orthologs #980. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.knowlesi:83

A8IKP1              	100.00%		B3L9F1              	100.00%
Bootstrap support for A8IKP1 as seed ortholog is 100%.
Bootstrap support for B3L9F1 as seed ortholog is 100%.

Group of orthologs #981. Best score 83 bits
Score difference with first non-orthologous sequence - C.reinhardtii:83 P.knowlesi:83

A8IX67              	100.00%		B3L9G1              	100.00%
Bootstrap support for A8IX67 as seed ortholog is 100%.
Bootstrap support for B3L9G1 as seed ortholog is 100%.

Group of orthologs #982. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:37 P.knowlesi:34

O64980              	100.00%		B3L2U6              	100.00%
Q2VIY5              	12.74%		
Bootstrap support for O64980 as seed ortholog is 97%.
Bootstrap support for B3L2U6 as seed ortholog is 95%.

Group of orthologs #983. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:82

Q8S4W5              	100.00%		B3L9P2              	100.00%
A8JFM0              	8.73%		
Bootstrap support for Q8S4W5 as seed ortholog is 100%.
Bootstrap support for B3L9P2 as seed ortholog is 100%.

Group of orthologs #984. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:82

A8HUY7              	100.00%		B3L0P7              	100.00%
Bootstrap support for A8HUY7 as seed ortholog is 100%.
Bootstrap support for B3L0P7 as seed ortholog is 100%.

Group of orthologs #985. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:7

A8JB67              	100.00%		B3L1M4              	100.00%
Bootstrap support for A8JB67 as seed ortholog is 100%.
Bootstrap support for B3L1M4 as seed ortholog is 67%.
Alternative seed ortholog is B3L543 (7 bits away from this cluster)

Group of orthologs #986. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:82

A8JAP4              	100.00%		B3L2L3              	100.00%
Bootstrap support for A8JAP4 as seed ortholog is 100%.
Bootstrap support for B3L2L3 as seed ortholog is 100%.

Group of orthologs #987. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:82

A8JIE5              	100.00%		B3KZ04              	100.00%
Bootstrap support for A8JIE5 as seed ortholog is 100%.
Bootstrap support for B3KZ04 as seed ortholog is 100%.

Group of orthologs #988. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:82

A8J9C0              	100.00%		B3LCH2              	100.00%
Bootstrap support for A8J9C0 as seed ortholog is 100%.
Bootstrap support for B3LCH2 as seed ortholog is 100%.

Group of orthologs #989. Best score 82 bits
Score difference with first non-orthologous sequence - C.reinhardtii:82 P.knowlesi:82

A8JBX6              	100.00%		B3LAD0              	100.00%
Bootstrap support for A8JBX6 as seed ortholog is 100%.
Bootstrap support for B3LAD0 as seed ortholog is 100%.

Group of orthologs #990. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8IRJ2              	100.74%		B3LB45              	100.00%
A8JJB7              	100.00%		
Bootstrap support for A8JJB7 as seed ortholog is 100%.
Bootstrap support for B3LB45 as seed ortholog is 100%.

Group of orthologs #991. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8IZM3              	100.00%		B3L1L8              	100.00%
Bootstrap support for A8IZM3 as seed ortholog is 100%.
Bootstrap support for B3L1L8 as seed ortholog is 100%.

Group of orthologs #992. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8IYV4              	100.00%		B3L6M1              	100.00%
Bootstrap support for A8IYV4 as seed ortholog is 100%.
Bootstrap support for B3L6M1 as seed ortholog is 100%.

Group of orthologs #993. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8J118              	100.00%		B3L4U7              	100.00%
Bootstrap support for A8J118 as seed ortholog is 100%.
Bootstrap support for B3L4U7 as seed ortholog is 100%.

Group of orthologs #994. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8IMJ3              	100.00%		B3LDE4              	100.00%
Bootstrap support for A8IMJ3 as seed ortholog is 100%.
Bootstrap support for B3LDE4 as seed ortholog is 100%.

Group of orthologs #995. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8IZY5              	100.00%		B3L882              	100.00%
Bootstrap support for A8IZY5 as seed ortholog is 100%.
Bootstrap support for B3L882 as seed ortholog is 100%.

Group of orthologs #996. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:6

A8JIP5              	100.00%		B3L0J3              	100.00%
Bootstrap support for A8JIP5 as seed ortholog is 100%.
Bootstrap support for B3L0J3 as seed ortholog is 55%.
Alternative seed ortholog is B3L241 (6 bits away from this cluster)

Group of orthologs #997. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:15 P.knowlesi:81

Q27YU4              	100.00%		B3L0U9              	100.00%
Bootstrap support for Q27YU4 as seed ortholog is 70%.
Alternative seed ortholog is A8JBA5 (15 bits away from this cluster)
Bootstrap support for B3L0U9 as seed ortholog is 100%.

Group of orthologs #998. Best score 81 bits
Score difference with first non-orthologous sequence - C.reinhardtii:81 P.knowlesi:81

A8JFP4              	100.00%		B3L6Y6              	100.00%
Bootstrap support for A8JFP4 as seed ortholog is 100%.
Bootstrap support for B3L6Y6 as seed ortholog is 100%.

Group of orthologs #999. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.knowlesi:80

A8JBB4              	100.00%		B3LAI5              	100.00%
A8JBE2              	50.84%		
A8JBA7              	48.32%		
Bootstrap support for A8JBB4 as seed ortholog is 54%.
Alternative seed ortholog is A8JEB2 (4 bits away from this cluster)
Bootstrap support for B3LAI5 as seed ortholog is 100%.

Group of orthologs #1000. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:80

A8HT22              	100.00%		B3L2J9              	100.00%
Bootstrap support for A8HT22 as seed ortholog is 100%.
Bootstrap support for B3L2J9 as seed ortholog is 100%.

Group of orthologs #1001. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:80

A8HV34              	100.00%		B3LBK1              	100.00%
Bootstrap support for A8HV34 as seed ortholog is 100%.
Bootstrap support for B3LBK1 as seed ortholog is 100%.

Group of orthologs #1002. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:80

A8IWM5              	100.00%		B3L175              	100.00%
Bootstrap support for A8IWM5 as seed ortholog is 100%.
Bootstrap support for B3L175 as seed ortholog is 100%.

Group of orthologs #1003. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:80

A8ITS3              	100.00%		B3L6C4              	100.00%
Bootstrap support for A8ITS3 as seed ortholog is 100%.
Bootstrap support for B3L6C4 as seed ortholog is 100%.

Group of orthologs #1004. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:80

A8J6Q2              	100.00%		B3L6I7              	100.00%
Bootstrap support for A8J6Q2 as seed ortholog is 100%.
Bootstrap support for B3L6I7 as seed ortholog is 100%.

Group of orthologs #1005. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:80 P.knowlesi:80

A8JF66              	100.00%		B3L0G4              	100.00%
Bootstrap support for A8JF66 as seed ortholog is 100%.
Bootstrap support for B3L0G4 as seed ortholog is 100%.

Group of orthologs #1006. Best score 80 bits
Score difference with first non-orthologous sequence - C.reinhardtii:34 P.knowlesi:80

A8JBH7              	100.00%		B3L869              	100.00%
Bootstrap support for A8JBH7 as seed ortholog is 84%.
Bootstrap support for B3L869 as seed ortholog is 100%.

Group of orthologs #1007. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:79

A8HUH8              	100.00%		B3KZ84              	100.00%
Bootstrap support for A8HUH8 as seed ortholog is 100%.
Bootstrap support for B3KZ84 as seed ortholog is 100%.

Group of orthologs #1008. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:79

A8ICM2              	100.00%		B3L7T3              	100.00%
Bootstrap support for A8ICM2 as seed ortholog is 100%.
Bootstrap support for B3L7T3 as seed ortholog is 100%.

Group of orthologs #1009. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:79

A8I6W9              	100.00%		B3LBN2              	100.00%
Bootstrap support for A8I6W9 as seed ortholog is 100%.
Bootstrap support for B3LBN2 as seed ortholog is 100%.

Group of orthologs #1010. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:79

A8J3X5              	100.00%		B3L1I9              	100.00%
Bootstrap support for A8J3X5 as seed ortholog is 100%.
Bootstrap support for B3L1I9 as seed ortholog is 100%.

Group of orthologs #1011. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:30 P.knowlesi:79

A8JDG4              	100.00%		B3L094              	100.00%
Bootstrap support for A8JDG4 as seed ortholog is 73%.
Alternative seed ortholog is A8HVY8 (30 bits away from this cluster)
Bootstrap support for B3L094 as seed ortholog is 100%.

Group of orthologs #1012. Best score 79 bits
Score difference with first non-orthologous sequence - C.reinhardtii:79 P.knowlesi:79

A8JGY0              	100.00%		B3L3A5              	100.00%
Bootstrap support for A8JGY0 as seed ortholog is 100%.
Bootstrap support for B3L3A5 as seed ortholog is 100%.

Group of orthologs #1013. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.knowlesi:78

A8HTY0              	100.00%		B3L617              	100.00%
Bootstrap support for A8HTY0 as seed ortholog is 100%.
Bootstrap support for B3L617 as seed ortholog is 100%.

Group of orthologs #1014. Best score 78 bits
Score difference with first non-orthologous sequence - C.reinhardtii:78 P.knowlesi:78

Q2HZ24              	100.00%		B3LBZ6              	100.00%
Bootstrap support for Q2HZ24 as seed ortholog is 100%.
Bootstrap support for B3LBZ6 as seed ortholog is 100%.

Group of orthologs #1015. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.knowlesi:77

A8IUU0              	100.00%		B3LAV5              	100.00%
A8JDZ5              	59.53%		
A8IS88              	35.21%		
A8JBI1              	26.86%		
A8HNJ4              	21.60%		
A8JGT0              	12.16%		
A8JAN0              	8.89%		
Bootstrap support for A8IUU0 as seed ortholog is 100%.
Bootstrap support for B3LAV5 as seed ortholog is 100%.

Group of orthologs #1016. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.knowlesi:77

A8IUM9              	100.00%		B3KZH5              	100.00%
Bootstrap support for A8IUM9 as seed ortholog is 100%.
Bootstrap support for B3KZH5 as seed ortholog is 100%.

Group of orthologs #1017. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.knowlesi:77

A8I1D3              	100.00%		B3LCA8              	100.00%
Bootstrap support for A8I1D3 as seed ortholog is 100%.
Bootstrap support for B3LCA8 as seed ortholog is 100%.

Group of orthologs #1018. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.knowlesi:77

A8J2R2              	100.00%		B3L053              	100.00%
Bootstrap support for A8J2R2 as seed ortholog is 100%.
Bootstrap support for B3L053 as seed ortholog is 100%.

Group of orthologs #1019. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.knowlesi:77

A8JAN2              	100.00%		B3L2I3              	100.00%
Bootstrap support for A8JAN2 as seed ortholog is 100%.
Bootstrap support for B3L2I3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 77 bits
Score difference with first non-orthologous sequence - C.reinhardtii:77 P.knowlesi:77

A8J1A3              	100.00%		B3LBQ3              	100.00%
Bootstrap support for A8J1A3 as seed ortholog is 100%.
Bootstrap support for B3LBQ3 as seed ortholog is 100%.

Group of orthologs #1021. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.knowlesi:76

A8IIF8              	100.00%		B3L8J4              	100.00%
Bootstrap support for A8IIF8 as seed ortholog is 100%.
Bootstrap support for B3L8J4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 76 bits
Score difference with first non-orthologous sequence - C.reinhardtii:76 P.knowlesi:76

A8J342              	100.00%		B3L7C1              	100.00%
Bootstrap support for A8J342 as seed ortholog is 100%.
Bootstrap support for B3L7C1 as seed ortholog is 100%.

Group of orthologs #1023. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:75

A8IEH6              	100.00%		B3L463              	100.00%
A8J8J8              	15.66%		
Bootstrap support for A8IEH6 as seed ortholog is 100%.
Bootstrap support for B3L463 as seed ortholog is 100%.

Group of orthologs #1024. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:75

A8IR93              	100.00%		B3L3R4              	100.00%
A8JGE5              	19.95%		
Bootstrap support for A8IR93 as seed ortholog is 100%.
Bootstrap support for B3L3R4 as seed ortholog is 100%.

Group of orthologs #1025. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:75

A8IQE3              	100.00%		B3LA74              	100.00%
Bootstrap support for A8IQE3 as seed ortholog is 100%.
Bootstrap support for B3LA74 as seed ortholog is 100%.

Group of orthologs #1026. Best score 75 bits
Score difference with first non-orthologous sequence - C.reinhardtii:75 P.knowlesi:75

A8J798              	100.00%		B3L4R0              	100.00%
Bootstrap support for A8J798 as seed ortholog is 100%.
Bootstrap support for B3L4R0 as seed ortholog is 100%.

Group of orthologs #1027. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8J775              	100.00%		B3LB17              	100.00%
A8HXE1              	19.85%		B3L1C1              	28.99%
Bootstrap support for A8J775 as seed ortholog is 100%.
Bootstrap support for B3LB17 as seed ortholog is 100%.

Group of orthologs #1028. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8I0C4              	100.00%		B3L9P6              	100.00%
Bootstrap support for A8I0C4 as seed ortholog is 100%.
Bootstrap support for B3L9P6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:24

A8I6C7              	100.00%		B3L8Q0              	100.00%
Bootstrap support for A8I6C7 as seed ortholog is 100%.
Bootstrap support for B3L8Q0 as seed ortholog is 79%.

Group of orthologs #1030. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8J0E8              	100.00%		B3L0D3              	100.00%
Bootstrap support for A8J0E8 as seed ortholog is 100%.
Bootstrap support for B3L0D3 as seed ortholog is 100%.

Group of orthologs #1031. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8IW77              	100.00%		B3L7G4              	100.00%
Bootstrap support for A8IW77 as seed ortholog is 100%.
Bootstrap support for B3L7G4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8JA68              	100.00%		B3L105              	100.00%
Bootstrap support for A8JA68 as seed ortholog is 100%.
Bootstrap support for B3L105 as seed ortholog is 100%.

Group of orthologs #1033. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8J6L2              	100.00%		B3L6W0              	100.00%
Bootstrap support for A8J6L2 as seed ortholog is 100%.
Bootstrap support for B3L6W0 as seed ortholog is 100%.

Group of orthologs #1034. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

A8J7V2              	100.00%		B3LAX3              	100.00%
Bootstrap support for A8J7V2 as seed ortholog is 100%.
Bootstrap support for B3LAX3 as seed ortholog is 100%.

Group of orthologs #1035. Best score 74 bits
Score difference with first non-orthologous sequence - C.reinhardtii:74 P.knowlesi:74

Q546J6              	100.00%		B3LBG5              	100.00%
Bootstrap support for Q546J6 as seed ortholog is 100%.
Bootstrap support for B3LBG5 as seed ortholog is 100%.

Group of orthologs #1036. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.knowlesi:73

A8I550              	100.00%		B3L4J8              	100.00%
A8I554              	36.38%		
Bootstrap support for A8I550 as seed ortholog is 100%.
Bootstrap support for B3L4J8 as seed ortholog is 100%.

Group of orthologs #1037. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.knowlesi:73

A8HRS8              	100.00%		B3L168              	100.00%
Bootstrap support for A8HRS8 as seed ortholog is 100%.
Bootstrap support for B3L168 as seed ortholog is 100%.

Group of orthologs #1038. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.knowlesi:73

A8INA3              	100.00%		B3KZM3              	100.00%
Bootstrap support for A8INA3 as seed ortholog is 100%.
Bootstrap support for B3KZM3 as seed ortholog is 100%.

Group of orthologs #1039. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.knowlesi:73

A8IQ82              	100.00%		B3L2G3              	100.00%
Bootstrap support for A8IQ82 as seed ortholog is 100%.
Bootstrap support for B3L2G3 as seed ortholog is 100%.

Group of orthologs #1040. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.knowlesi:73

A8IK60              	100.00%		B3LD71              	100.00%
Bootstrap support for A8IK60 as seed ortholog is 100%.
Bootstrap support for B3LD71 as seed ortholog is 100%.

Group of orthologs #1041. Best score 73 bits
Score difference with first non-orthologous sequence - C.reinhardtii:73 P.knowlesi:73

A8J907              	100.00%		B3L3A7              	100.00%
Bootstrap support for A8J907 as seed ortholog is 100%.
Bootstrap support for B3L3A7 as seed ortholog is 100%.

Group of orthologs #1042. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8IYH1              	100.00%		B3L4D3              	100.00%
A8JHA9              	56.74%		
Bootstrap support for A8IYH1 as seed ortholog is 100%.
Bootstrap support for B3L4D3 as seed ortholog is 100%.

Group of orthologs #1043. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8JB57              	100.00%		B3L5Q8              	100.00%
A8JB90              	66.91%		
Bootstrap support for A8JB57 as seed ortholog is 100%.
Bootstrap support for B3L5Q8 as seed ortholog is 100%.

Group of orthologs #1044. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8IDZ9              	100.00%		B3L4E0              	100.00%
Bootstrap support for A8IDZ9 as seed ortholog is 100%.
Bootstrap support for B3L4E0 as seed ortholog is 100%.

Group of orthologs #1045. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8IRA6              	100.00%		B3L2F9              	100.00%
Bootstrap support for A8IRA6 as seed ortholog is 100%.
Bootstrap support for B3L2F9 as seed ortholog is 100%.

Group of orthologs #1046. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8J0Q9              	100.00%		B3L0Z6              	100.00%
Bootstrap support for A8J0Q9 as seed ortholog is 100%.
Bootstrap support for B3L0Z6 as seed ortholog is 100%.

Group of orthologs #1047. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8J577              	100.00%		B3L000              	100.00%
Bootstrap support for A8J577 as seed ortholog is 100%.
Bootstrap support for B3L000 as seed ortholog is 100%.

Group of orthologs #1048. Best score 72 bits
Score difference with first non-orthologous sequence - C.reinhardtii:72 P.knowlesi:72

A8JHF2              	100.00%		B3L841              	100.00%
Bootstrap support for A8JHF2 as seed ortholog is 100%.
Bootstrap support for B3L841 as seed ortholog is 100%.

Group of orthologs #1049. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:71

A8HPV7              	100.00%		B3L7D3              	100.00%
Bootstrap support for A8HPV7 as seed ortholog is 100%.
Bootstrap support for B3L7D3 as seed ortholog is 100%.

Group of orthologs #1050. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:71

A8HTH0              	100.00%		B3L9Z9              	100.00%
Bootstrap support for A8HTH0 as seed ortholog is 100%.
Bootstrap support for B3L9Z9 as seed ortholog is 100%.

Group of orthologs #1051. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:71

A8IR43              	100.00%		B3L798              	100.00%
Bootstrap support for A8IR43 as seed ortholog is 100%.
Bootstrap support for B3L798 as seed ortholog is 100%.

Group of orthologs #1052. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:71

A8IS54              	100.00%		B3L9H6              	100.00%
Bootstrap support for A8IS54 as seed ortholog is 100%.
Bootstrap support for B3L9H6 as seed ortholog is 100%.

Group of orthologs #1053. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:26

A8INI0              	100.00%		B3LDD7              	100.00%
Bootstrap support for A8INI0 as seed ortholog is 100%.
Bootstrap support for B3LDD7 as seed ortholog is 60%.
Alternative seed ortholog is B3L2E3 (26 bits away from this cluster)

Group of orthologs #1054. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:71 P.knowlesi:71

A8JC18              	100.00%		B3L928              	100.00%
Bootstrap support for A8JC18 as seed ortholog is 100%.
Bootstrap support for B3L928 as seed ortholog is 100%.

Group of orthologs #1055. Best score 71 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.knowlesi:25

A8JHU3              	100.00%		B3LAK8              	100.00%
Bootstrap support for A8JHU3 as seed ortholog is 57%.
Alternative seed ortholog is A8HRP7 (4 bits away from this cluster)
Bootstrap support for B3LAK8 as seed ortholog is 90%.

Group of orthologs #1056. Best score 70 bits
Score difference with first non-orthologous sequence - C.reinhardtii:70 P.knowlesi:70

A8I4L4              	100.00%		B3LCD3              	100.00%
Bootstrap support for A8I4L4 as seed ortholog is 100%.
Bootstrap support for B3LCD3 as seed ortholog is 100%.

Group of orthologs #1057. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.knowlesi:69

A8J5R4              	100.00%		B3L637              	100.00%
A8JGA6              	50.38%		
Bootstrap support for A8J5R4 as seed ortholog is 100%.
Bootstrap support for B3L637 as seed ortholog is 100%.

Group of orthologs #1058. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.knowlesi:69

A8HR57              	100.00%		B3KZ07              	100.00%
Bootstrap support for A8HR57 as seed ortholog is 100%.
Bootstrap support for B3KZ07 as seed ortholog is 100%.

Group of orthologs #1059. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.knowlesi:69

A8I2N9              	100.00%		B3L262              	100.00%
Bootstrap support for A8I2N9 as seed ortholog is 100%.
Bootstrap support for B3L262 as seed ortholog is 100%.

Group of orthologs #1060. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.knowlesi:69

A8IHQ2              	100.00%		B3L5S2              	100.00%
Bootstrap support for A8IHQ2 as seed ortholog is 100%.
Bootstrap support for B3L5S2 as seed ortholog is 100%.

Group of orthologs #1061. Best score 69 bits
Score difference with first non-orthologous sequence - C.reinhardtii:69 P.knowlesi:69

A8IA80              	100.00%		B3L8R2              	100.00%
Bootstrap support for A8IA80 as seed ortholog is 100%.
Bootstrap support for B3L8R2 as seed ortholog is 100%.

Group of orthologs #1062. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.knowlesi:68

A2PZD3              	100.00%		B3L0Q4              	100.00%
Bootstrap support for A2PZD3 as seed ortholog is 100%.
Bootstrap support for B3L0Q4 as seed ortholog is 100%.

Group of orthologs #1063. Best score 68 bits
Score difference with first non-orthologous sequence - C.reinhardtii:68 P.knowlesi:68

A8JFN9              	100.00%		B3L9U9              	100.00%
Bootstrap support for A8JFN9 as seed ortholog is 100%.
Bootstrap support for B3L9U9 as seed ortholog is 100%.

Group of orthologs #1064. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:67

A8I3U7              	100.00%		B3LCM5              	100.00%
A8I501              	61.51%		
Bootstrap support for A8I3U7 as seed ortholog is 100%.
Bootstrap support for B3LCM5 as seed ortholog is 100%.

Group of orthologs #1065. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:67

A8IT66              	100.00%		B3LBE6              	100.00%
A8HZC0              	7.24%		
Bootstrap support for A8IT66 as seed ortholog is 100%.
Bootstrap support for B3LBE6 as seed ortholog is 100%.

Group of orthologs #1066. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:67

A8HQC1              	100.00%		B3L5M1              	100.00%
Bootstrap support for A8HQC1 as seed ortholog is 100%.
Bootstrap support for B3L5M1 as seed ortholog is 100%.

Group of orthologs #1067. Best score 67 bits
Score difference with first non-orthologous sequence - C.reinhardtii:67 P.knowlesi:67

A8J098              	100.00%		B3L995              	100.00%
Bootstrap support for A8J098 as seed ortholog is 100%.
Bootstrap support for B3L995 as seed ortholog is 100%.

Group of orthologs #1068. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.knowlesi:66

A8IU94              	100.00%		B3L245              	100.00%
Bootstrap support for A8IU94 as seed ortholog is 100%.
Bootstrap support for B3L245 as seed ortholog is 100%.

Group of orthologs #1069. Best score 66 bits
Score difference with first non-orthologous sequence - C.reinhardtii:66 P.knowlesi:66

A8JAW3              	100.00%		B3L6H7              	100.00%
Bootstrap support for A8JAW3 as seed ortholog is 100%.
Bootstrap support for B3L6H7 as seed ortholog is 100%.

Group of orthologs #1070. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.knowlesi:65

A8IJY7              	100.00%		B3L8Q3              	100.00%
A8JIE0              	15.52%		
Bootstrap support for A8IJY7 as seed ortholog is 100%.
Bootstrap support for B3L8Q3 as seed ortholog is 100%.

Group of orthologs #1071. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.knowlesi:65

A8IC48              	100.00%		B3L5I9              	100.00%
Bootstrap support for A8IC48 as seed ortholog is 100%.
Bootstrap support for B3L5I9 as seed ortholog is 100%.

Group of orthologs #1072. Best score 65 bits
Score difference with first non-orthologous sequence - C.reinhardtii:65 P.knowlesi:65

A8JCP0              	100.00%		B3LD76              	100.00%
Bootstrap support for A8JCP0 as seed ortholog is 100%.
Bootstrap support for B3LD76 as seed ortholog is 100%.

Group of orthologs #1073. Best score 64 bits
Score difference with first non-orthologous sequence - C.reinhardtii:64 P.knowlesi:64

A8ISD8              	100.00%		B3LCX5              	100.00%
Bootstrap support for A8ISD8 as seed ortholog is 100%.
Bootstrap support for B3LCX5 as seed ortholog is 100%.

Group of orthologs #1074. Best score 63 bits
Score difference with first non-orthologous sequence - C.reinhardtii:63 P.knowlesi:63

A8IQU0              	100.00%		B3L3K0              	100.00%
Bootstrap support for A8IQU0 as seed ortholog is 100%.
Bootstrap support for B3L3K0 as seed ortholog is 100%.

Group of orthologs #1075. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:62

A8HNJ8              	100.00%		B3L7S0              	100.00%
Bootstrap support for A8HNJ8 as seed ortholog is 100%.
Bootstrap support for B3L7S0 as seed ortholog is 100%.

Group of orthologs #1076. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:62

A8HQS2              	100.00%		B3L6T3              	100.00%
Bootstrap support for A8HQS2 as seed ortholog is 100%.
Bootstrap support for B3L6T3 as seed ortholog is 100%.

Group of orthologs #1077. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:62

A8IK66              	100.00%		B3L2L8              	100.00%
Bootstrap support for A8IK66 as seed ortholog is 100%.
Bootstrap support for B3L2L8 as seed ortholog is 100%.

Group of orthologs #1078. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:62

A8J2G7              	100.00%		B3LAV8              	100.00%
Bootstrap support for A8J2G7 as seed ortholog is 100%.
Bootstrap support for B3LAV8 as seed ortholog is 100%.

Group of orthologs #1079. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:62

A8J8A6              	100.00%		B3LBG4              	100.00%
Bootstrap support for A8J8A6 as seed ortholog is 100%.
Bootstrap support for B3LBG4 as seed ortholog is 100%.

Group of orthologs #1080. Best score 62 bits
Score difference with first non-orthologous sequence - C.reinhardtii:62 P.knowlesi:62

Q9GGE2              	100.00%		B3L5I3              	100.00%
Bootstrap support for Q9GGE2 as seed ortholog is 100%.
Bootstrap support for B3L5I3 as seed ortholog is 100%.

Group of orthologs #1081. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:4 P.knowlesi:61

A8JBW3              	100.00%		B3L583              	100.00%
A8IJN6              	7.02%		
A8IS58              	7.02%		
Bootstrap support for A8JBW3 as seed ortholog is 54%.
Alternative seed ortholog is A8J101 (4 bits away from this cluster)
Bootstrap support for B3L583 as seed ortholog is 100%.

Group of orthologs #1082. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.knowlesi:61

A8IYX0              	100.00%		B3L4R7              	100.00%
Bootstrap support for A8IYX0 as seed ortholog is 100%.
Bootstrap support for B3L4R7 as seed ortholog is 100%.

Group of orthologs #1083. Best score 61 bits
Score difference with first non-orthologous sequence - C.reinhardtii:61 P.knowlesi:61

A8J5Q8              	100.00%		B3L481              	100.00%
Bootstrap support for A8J5Q8 as seed ortholog is 100%.
Bootstrap support for B3L481 as seed ortholog is 100%.

Group of orthologs #1084. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.knowlesi:60

A8HSS5              	100.00%		B3LDC0              	100.00%
Bootstrap support for A8HSS5 as seed ortholog is 100%.
Bootstrap support for B3LDC0 as seed ortholog is 100%.

Group of orthologs #1085. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:7 P.knowlesi:60

A8IU47              	100.00%		B3L0T1              	100.00%
Bootstrap support for A8IU47 as seed ortholog is 61%.
Alternative seed ortholog is Q944M8 (7 bits away from this cluster)
Bootstrap support for B3L0T1 as seed ortholog is 100%.

Group of orthologs #1086. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.knowlesi:60

A8IQJ2              	100.00%		B3LCT3              	100.00%
Bootstrap support for A8IQJ2 as seed ortholog is 100%.
Bootstrap support for B3LCT3 as seed ortholog is 100%.

Group of orthologs #1087. Best score 60 bits
Score difference with first non-orthologous sequence - C.reinhardtii:60 P.knowlesi:60

A8J3E1              	100.00%		B3L355              	100.00%
Bootstrap support for A8J3E1 as seed ortholog is 100%.
Bootstrap support for B3L355 as seed ortholog is 100%.

Group of orthologs #1088. Best score 59 bits
Score difference with first non-orthologous sequence - C.reinhardtii:59 P.knowlesi:59

A8I7E9              	100.00%		B3L0G1              	100.00%
Bootstrap support for A8I7E9 as seed ortholog is 100%.
Bootstrap support for B3L0G1 as seed ortholog is 100%.

Group of orthologs #1089. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.knowlesi:58

A8J591              	100.00%		B3L7J5              	100.00%
Bootstrap support for A8J591 as seed ortholog is 100%.
Bootstrap support for B3L7J5 as seed ortholog is 100%.

Group of orthologs #1090. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.knowlesi:58

Q9LKH0              	100.00%		B3L218              	100.00%
Bootstrap support for Q9LKH0 as seed ortholog is 100%.
Bootstrap support for B3L218 as seed ortholog is 100%.

Group of orthologs #1091. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.knowlesi:58

Q8GUQ9              	100.00%		B3L5A8              	100.00%
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.
Bootstrap support for B3L5A8 as seed ortholog is 100%.

Group of orthologs #1092. Best score 58 bits
Score difference with first non-orthologous sequence - C.reinhardtii:58 P.knowlesi:58

A8JGS4              	100.00%		B3LCA9              	100.00%
Bootstrap support for A8JGS4 as seed ortholog is 100%.
Bootstrap support for B3LCA9 as seed ortholog is 100%.

Group of orthologs #1093. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:57

A8HW20              	100.00%		B3L3P0              	100.00%
Bootstrap support for A8HW20 as seed ortholog is 100%.
Bootstrap support for B3L3P0 as seed ortholog is 100%.

Group of orthologs #1094. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:57

A8IWK1              	100.00%		B3L730              	100.00%
Bootstrap support for A8IWK1 as seed ortholog is 100%.
Bootstrap support for B3L730 as seed ortholog is 100%.

Group of orthologs #1095. Best score 57 bits
Score difference with first non-orthologous sequence - C.reinhardtii:57 P.knowlesi:57

A8J0Y5              	100.00%		B3LCZ2              	100.00%
Bootstrap support for A8J0Y5 as seed ortholog is 100%.
Bootstrap support for B3LCZ2 as seed ortholog is 100%.

Group of orthologs #1096. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.knowlesi:6

A8I893              	100.00%		B3L3T0              	100.00%
A8J1H6              	6.26%		
A8IEW6              	5.77%		
Bootstrap support for A8I893 as seed ortholog is 100%.
Bootstrap support for B3L3T0 as seed ortholog is 55%.
Alternative seed ortholog is B3LC69 (6 bits away from this cluster)

Group of orthologs #1097. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.knowlesi:56

Q5VLJ9              	100.00%		B3L5D6              	100.00%
A8IR22              	13.82%		
Bootstrap support for Q5VLJ9 as seed ortholog is 100%.
Bootstrap support for B3L5D6 as seed ortholog is 100%.

Group of orthologs #1098. Best score 56 bits
Score difference with first non-orthologous sequence - C.reinhardtii:56 P.knowlesi:56

Q8L439              	100.00%		B3L5K4              	100.00%
Bootstrap support for Q8L439 as seed ortholog is 100%.
Bootstrap support for B3L5K4 as seed ortholog is 100%.

Group of orthologs #1099. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.knowlesi:55

A8HTE8              	100.00%		B3LD15              	100.00%
Bootstrap support for A8HTE8 as seed ortholog is 100%.
Bootstrap support for B3LD15 as seed ortholog is 100%.

Group of orthologs #1100. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.knowlesi:55

A8I707              	100.00%		B3LDB5              	100.00%
Bootstrap support for A8I707 as seed ortholog is 100%.
Bootstrap support for B3LDB5 as seed ortholog is 100%.

Group of orthologs #1101. Best score 55 bits
Score difference with first non-orthologous sequence - C.reinhardtii:55 P.knowlesi:55

A8IVB1              	100.00%		B3L548              	100.00%
Bootstrap support for A8IVB1 as seed ortholog is 100%.
Bootstrap support for B3L548 as seed ortholog is 100%.

Group of orthologs #1102. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.knowlesi:54

A8HSJ6              	100.00%		B3L3P7              	100.00%
Bootstrap support for A8HSJ6 as seed ortholog is 100%.
Bootstrap support for B3L3P7 as seed ortholog is 100%.

Group of orthologs #1103. Best score 54 bits
Score difference with first non-orthologous sequence - C.reinhardtii:54 P.knowlesi:54

A8ITN4              	100.00%		B3L8H2              	100.00%
Bootstrap support for A8ITN4 as seed ortholog is 100%.
Bootstrap support for B3L8H2 as seed ortholog is 100%.

Group of orthologs #1104. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.knowlesi:53

A8IGB8              	100.00%		B3LB85              	100.00%
Bootstrap support for A8IGB8 as seed ortholog is 100%.
Bootstrap support for B3LB85 as seed ortholog is 100%.

Group of orthologs #1105. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.knowlesi:53

A8J0C9              	100.00%		B3L4Z5              	100.00%
Bootstrap support for A8J0C9 as seed ortholog is 100%.
Bootstrap support for B3L4Z5 as seed ortholog is 100%.

Group of orthologs #1106. Best score 53 bits
Score difference with first non-orthologous sequence - C.reinhardtii:53 P.knowlesi:53

A8J8N9              	100.00%		B3LAC3              	100.00%
Bootstrap support for A8J8N9 as seed ortholog is 100%.
Bootstrap support for B3LAC3 as seed ortholog is 100%.

Group of orthologs #1107. Best score 52 bits
Score difference with first non-orthologous sequence - C.reinhardtii:10 P.knowlesi:52

A8I1Y0              	100.00%		B3L3P5              	100.00%
Bootstrap support for A8I1Y0 as seed ortholog is 73%.
Alternative seed ortholog is A8HXB5 (10 bits away from this cluster)
Bootstrap support for B3L3P5 as seed ortholog is 100%.

Group of orthologs #1108. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.knowlesi:51

A8IW57              	100.00%		B3L9B6              	100.00%
Bootstrap support for A8IW57 as seed ortholog is 100%.
Bootstrap support for B3L9B6 as seed ortholog is 100%.

Group of orthologs #1109. Best score 51 bits
Score difference with first non-orthologous sequence - C.reinhardtii:51 P.knowlesi:51

A8J4G2              	100.00%		B3L8R6              	100.00%
Bootstrap support for A8J4G2 as seed ortholog is 100%.
Bootstrap support for B3L8R6 as seed ortholog is 100%.

Group of orthologs #1110. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.knowlesi:50

P05726              	100.00%		B3LAW6              	100.00%
A8J8X9              	13.91%		
Bootstrap support for P05726 as seed ortholog is 100%.
Bootstrap support for B3LAW6 as seed ortholog is 100%.

Group of orthologs #1111. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.knowlesi:50

A8HME1              	100.00%		B3L5Q2              	100.00%
Bootstrap support for A8HME1 as seed ortholog is 100%.
Bootstrap support for B3L5Q2 as seed ortholog is 100%.

Group of orthologs #1112. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.knowlesi:50

A8J8S8              	100.00%		B3LBF8              	100.00%
Bootstrap support for A8J8S8 as seed ortholog is 100%.
Bootstrap support for B3LBF8 as seed ortholog is 100%.

Group of orthologs #1113. Best score 50 bits
Score difference with first non-orthologous sequence - C.reinhardtii:50 P.knowlesi:50

A8JH74              	100.00%		B3L6Z8              	100.00%
Bootstrap support for A8JH74 as seed ortholog is 100%.
Bootstrap support for B3L6Z8 as seed ortholog is 100%.

Group of orthologs #1114. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.knowlesi:49

A8HQJ8              	100.00%		B3LB20              	100.00%
Bootstrap support for A8HQJ8 as seed ortholog is 100%.
Bootstrap support for B3LB20 as seed ortholog is 100%.

Group of orthologs #1115. Best score 49 bits
Score difference with first non-orthologous sequence - C.reinhardtii:49 P.knowlesi:1

A8HPM7              	100.00%		B3LC25              	100.00%
Bootstrap support for A8HPM7 as seed ortholog is 100%.
Bootstrap support for B3LC25 as seed ortholog is 48%.
Alternative seed ortholog is B3LC79 (1 bits away from this cluster)

Group of orthologs #1116. Best score 48 bits
Score difference with first non-orthologous sequence - C.reinhardtii:48 P.knowlesi:48

A8HQJ0              	100.00%		B3L6F3              	100.00%
Bootstrap support for A8HQJ0 as seed ortholog is 100%.
Bootstrap support for B3L6F3 as seed ortholog is 100%.

Group of orthologs #1117. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.knowlesi:47

A8I6B6              	100.00%		B3LBU7              	100.00%
A8I2G1              	10.85%		
A8IVN2              	9.67%		
A8HTG4              	5.90%		
Bootstrap support for A8I6B6 as seed ortholog is 100%.
Bootstrap support for B3LBU7 as seed ortholog is 100%.

Group of orthologs #1118. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.knowlesi:47

A8HVD7              	100.00%		B3L7P7              	100.00%
A8IZS5              	5.15%		
Bootstrap support for A8HVD7 as seed ortholog is 100%.
Bootstrap support for B3L7P7 as seed ortholog is 100%.

Group of orthologs #1119. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.knowlesi:47

A8I3Q3              	100.00%		B3KZQ4              	100.00%
Bootstrap support for A8I3Q3 as seed ortholog is 100%.
Bootstrap support for B3KZQ4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.knowlesi:47

A8I6P9              	100.00%		B3L173              	100.00%
Bootstrap support for A8I6P9 as seed ortholog is 100%.
Bootstrap support for B3L173 as seed ortholog is 100%.

Group of orthologs #1121. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.knowlesi:47

A8IFE6              	100.00%		B3L1D9              	100.00%
Bootstrap support for A8IFE6 as seed ortholog is 100%.
Bootstrap support for B3L1D9 as seed ortholog is 100%.

Group of orthologs #1122. Best score 47 bits
Score difference with first non-orthologous sequence - C.reinhardtii:47 P.knowlesi:47

A8J7D2              	100.00%		B3L0G2              	100.00%
Bootstrap support for A8J7D2 as seed ortholog is 100%.
Bootstrap support for B3L0G2 as seed ortholog is 100%.

Group of orthologs #1123. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.knowlesi:46

A8HPA4              	100.00%		B3KZ05              	100.00%
A8HPE3              	48.75%		
A8J8Z8              	42.81%		
A8HPA6              	37.19%		
A8J8Z3              	23.75%		
A8HV39              	9.06%		
A8J937              	8.12%		
A8J935              	5.31%		
Bootstrap support for A8HPA4 as seed ortholog is 100%.
Bootstrap support for B3KZ05 as seed ortholog is 100%.

Group of orthologs #1124. Best score 46 bits
Score difference with first non-orthologous sequence - C.reinhardtii:46 P.knowlesi:46

A8ITP2              	100.00%		B3LBP3              	100.00%
A8IAI7              	8.55%		
Bootstrap support for A8ITP2 as seed ortholog is 100%.
Bootstrap support for B3LBP3 as seed ortholog is 100%.

Group of orthologs #1125. Best score 45 bits
Score difference with first non-orthologous sequence - C.reinhardtii:45 P.knowlesi:45

A8JEX0              	100.00%		B3L8J7              	100.00%
Bootstrap support for A8JEX0 as seed ortholog is 100%.
Bootstrap support for B3L8J7 as seed ortholog is 100%.

Group of orthologs #1126. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.knowlesi:44

A8ITW3              	100.00%		B3KZ73              	100.00%
Bootstrap support for A8ITW3 as seed ortholog is 100%.
Bootstrap support for B3KZ73 as seed ortholog is 100%.

Group of orthologs #1127. Best score 44 bits
Score difference with first non-orthologous sequence - C.reinhardtii:44 P.knowlesi:44

A8ICT4              	100.00%		B3LC49              	100.00%
Bootstrap support for A8ICT4 as seed ortholog is 100%.
Bootstrap support for B3LC49 as seed ortholog is 100%.

Group of orthologs #1128. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:43

A8IGW2              	100.00%		B3KZY8              	100.00%
Bootstrap support for A8IGW2 as seed ortholog is 100%.
Bootstrap support for B3KZY8 as seed ortholog is 100%.

Group of orthologs #1129. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:43

A8I5E8              	100.00%		B3L8D6              	100.00%
Bootstrap support for A8I5E8 as seed ortholog is 100%.
Bootstrap support for B3L8D6 as seed ortholog is 100%.

Group of orthologs #1130. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:43

A8I9Q3              	100.00%		B3L793              	100.00%
Bootstrap support for A8I9Q3 as seed ortholog is 100%.
Bootstrap support for B3L793 as seed ortholog is 100%.

Group of orthologs #1131. Best score 43 bits
Score difference with first non-orthologous sequence - C.reinhardtii:43 P.knowlesi:43

A8JGS2              	100.00%		B3L6X0              	100.00%
Bootstrap support for A8JGS2 as seed ortholog is 100%.
Bootstrap support for B3L6X0 as seed ortholog is 100%.

Group of orthologs #1132. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.knowlesi:42

A8JAP8              	100.00%		B3L0U3              	100.00%
A8IYF2              	21.71%		
Bootstrap support for A8JAP8 as seed ortholog is 100%.
Bootstrap support for B3L0U3 as seed ortholog is 100%.

Group of orthologs #1133. Best score 42 bits
Score difference with first non-orthologous sequence - C.reinhardtii:42 P.knowlesi:42

A8I439              	100.00%		B3LC45              	100.00%
Bootstrap support for A8I439 as seed ortholog is 100%.
Bootstrap support for B3LC45 as seed ortholog is 100%.

Group of orthologs #1134. Best score 41 bits
Score difference with first non-orthologous sequence - C.reinhardtii:41 P.knowlesi:41

A8IY91              	100.00%		B3KZS6              	100.00%
Bootstrap support for A8IY91 as seed ortholog is 100%.
Bootstrap support for B3KZS6 as seed ortholog is 100%.